Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORA40B-201ENST00000385573 128 ntBASIC-4.24□□□□□ -3.09
APOEP02649 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.25□□□□□ -3.09
APOEP02649 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.25□□□□□ -3.09
APOEP02649 RNU6-345P-201ENST00000517001 107 ntBASIC-4.25□□□□□ -3.09
APOEP02649 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.25□□□□□ -3.09
APOEP02649 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.26□□□□□ -3.09
APOEP02649 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.26□□□□□ -3.09
APOEP02649 RNA5SP106-201ENST00000517274 100 ntBASIC-4.26□□□□□ -3.09
APOEP02649 RNU6-959P-201ENST00000384671 107 ntBASIC-4.27□□□□□ -3.09
APOEP02649 RNU6-987P-201ENST00000384759 104 ntBASIC-4.27□□□□□ -3.09
APOEP02649 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.27□□□□□ -3.09
APOEP02649 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.29□□□□□ -3.1
APOEP02649 SNORD45.2-201ENST00000363552 72 ntBASIC-4.29□□□□□ -3.1
APOEP02649 RNU6-300P-201ENST00000459080 104 ntBASIC-4.29□□□□□ -3.1
APOEP02649 AL365222.1-201ENST00000614661 98 ntBASIC-4.29□□□□□ -3.1
APOEP02649 RNU6-590P-201ENST00000365039 107 ntBASIC-4.3□□□□□ -3.1
APOEP02649 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.31□□□□□ -3.1
APOEP02649 RNY4P10-201ENST00000365571 96 ntBASIC-4.32□□□□□ -3.1
APOEP02649 AL451105.1-201ENST00000450005 189 ntBASIC-4.33□□□□□ -3.1
APOEP02649 SNORA40.16-201ENST00000517238 121 ntBASIC-4.33□□□□□ -3.1
APOEP02649 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.34□□□□□ -3.1
APOEP02649 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.34□□□□□ -3.1
APOEP02649 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.35□□□□□ -3.11
APOEP02649 RNU6-176P-201ENST00000517196 105 ntBASIC-4.35□□□□□ -3.11
APOEP02649 MIR3134-201ENST00000579433 74 ntBASIC-4.36□□□□□ -3.11
APOEP02649 MIR5588-201ENST00000581890 63 ntBASIC-4.36□□□□□ -3.11
APOEP02649 MIR4712-201ENST00000583750 82 ntBASIC-4.36□□□□□ -3.11
APOEP02649 RNU6-687P-201ENST00000516443 89 ntBASIC-4.37□□□□□ -3.11
APOEP02649 IGLL4P-201ENST00000614590 133 ntBASIC-4.37□□□□□ -3.11
APOEP02649 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.38□□□□□ -3.11
APOEP02649 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.38□□□□□ -3.11
APOEP02649 RNU6-640P-201ENST00000363693 105 ntBASIC-4.39□□□□□ -3.11
APOEP02649 MIR3133-201ENST00000583157 78 ntBASIC-4.39□□□□□ -3.11
APOEP02649 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.4□□□□□ -3.11
APOEP02649 RNU6-737P-201ENST00000365370 107 ntBASIC-4.4□□□□□ -3.11
APOEP02649 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.41□□□□□ -3.12
APOEP02649 RNU6-979P-201ENST00000383896 107 ntBASIC-4.42□□□□□ -3.12
APOEP02649 MIR1245B-201ENST00000636115 69 ntBASIC-4.42□□□□□ -3.12
APOEP02649 RNU6-122P-201ENST00000516818 107 ntBASIC-4.43□□□□□ -3.12
APOEP02649 Y_RNA.703-201ENST00000516846 111 ntBASIC-4.43□□□□□ -3.12
APOEP02649 RNU7-119P-201ENST00000459279 63 ntBASIC-4.44□□□□□ -3.12
APOEP02649 SNORA25.5-201ENST00000363782 126 ntBASIC-4.46□□□□□ -3.12
APOEP02649 RNU7-171P-201ENST00000459581 62 ntBASIC-4.51□□□□□ -3.13
APOEP02649 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.52□□□□□ -3.13
APOEP02649 RNU6-32P-201ENST00000383948 107 ntBASIC-4.52□□□□□ -3.13
APOEP02649 RNU6-13P-201ENST00000384248 107 ntBASIC-4.52□□□□□ -3.13
APOEP02649 RNU6-12P-201ENST00000384604 107 ntBASIC-4.52□□□□□ -3.13
APOEP02649 RNU6-41P-201ENST00000384741 107 ntBASIC-4.52□□□□□ -3.13
APOEP02649 RNU6-1168P-201ENST00000390831 104 ntBASIC-4.52□□□□□ -3.13
APOEP02649 RNU6-742P-201ENST00000365289 107 ntBASIC-4.53□□□□□ -3.13
APOEP02649 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.54□□□□□ -3.14
APOEP02649 RNU6-81P-201ENST00000365608 104 ntBASIC-4.55□□□□□ -3.14
APOEP02649 SNORD115-45-201ENST00000391078 81 ntBASIC-4.55□□□□□ -3.14
APOEP02649 RNU6-411P-201ENST00000384451 107 ntBASIC-4.56□□□□□ -3.14
APOEP02649 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.58□□□□□ -3.14
APOEP02649 RNU6-663P-201ENST00000391105 106 ntBASIC-4.58□□□□□ -3.14
APOEP02649 RNU6-419P-201ENST00000517030 63 ntBASIC-4.59□□□□□ -3.14
APOEP02649 RNU6-22P-201ENST00000384355 107 ntBASIC-4.61□□□□□ -3.15
APOEP02649 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.61□□□□□ -3.15
APOEP02649 RNU6-822P-201ENST00000362707 106 ntBASIC-4.62□□□□□ -3.15
APOEP02649 RNU6-1131P-201ENST00000364955 107 ntBASIC-4.62□□□□□ -3.15
APOEP02649 RNU6-854P-201ENST00000364036 107 ntBASIC-4.63□□□□□ -3.15
APOEP02649 RNU6-49P-201ENST00000384256 107 ntBASIC-4.63□□□□□ -3.15
APOEP02649 AC090425.1-201ENST00000610007 140 ntBASIC-4.63□□□□□ -3.15
APOEP02649 RNU6-634P-201ENST00000459134 106 ntBASIC-4.65□□□□□ -3.15
APOEP02649 SNORA25.4-201ENST00000363666 124 ntBASIC-4.66□□□□□ -3.16
APOEP02649 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.67□□□□□ -3.16
APOEP02649 RNU6-1154P-201ENST00000391001 104 ntBASIC-4.67□□□□□ -3.16
APOEP02649 RNU6-147P-201ENST00000383983 107 ntBASIC-4.68□□□□□ -3.16
APOEP02649 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.69□□□□□ -3.16
APOEP02649 RNU6-940P-201ENST00000363433 104 ntBASIC-4.71□□□□□ -3.16
APOEP02649 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.71□□□□□ -3.16
APOEP02649 RNU6-1117P-201ENST00000384525 104 ntBASIC-4.71□□□□□ -3.16
APOEP02649 MIR656-201ENST00000385224 78 ntBASIC-4.71□□□□□ -3.16
APOEP02649 AC139453.2-201ENST00000487255 133 ntBASIC-4.71□□□□□ -3.16
APOEP02649 MIR124-1-201ENST00000385275 85 ntBASIC-4.72□□□□□ -3.17
APOEP02649 AC062037.1-201ENST00000605302 128 ntBASIC-4.72□□□□□ -3.17
APOEP02649 RNU6-242P-201ENST00000384359 107 ntBASIC-4.73□□□□□ -3.17
APOEP02649 RNU6-313P-201ENST00000516317 112 ntBASIC-4.73□□□□□ -3.17
APOEP02649 MIR3938-201ENST00000582157 103 ntBASIC-4.74□□□□□ -3.17
APOEP02649 U7.4-201ENST00000614961 63 ntBASIC-4.74□□□□□ -3.17
APOEP02649 RNU6-1276P-201ENST00000365372 104 ntBASIC-4.75□□□□□ -3.17
APOEP02649 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-4.75□□□□□ -3.17
APOEP02649 MIR4666B-201ENST00000578142 81 ntBASIC-4.75□□□□□ -3.17
APOEP02649 RNU6-209P-201ENST00000384118 107 ntBASIC-4.76□□□□□ -3.17
APOEP02649 RNU6-665P-201ENST00000384639 107 ntBASIC-4.76□□□□□ -3.17
APOEP02649 SNORD30.1-201ENST00000391309 70 ntBASIC-4.76□□□□□ -3.17
APOEP02649 MIR494-201ENST00000349529 81 ntBASIC-4.78□□□□□ -3.17
APOEP02649 MIR548AH-201ENST00000637109 76 ntBASIC-4.78□□□□□ -3.17
APOEP02649 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.79□□□□□ -3.18
APOEP02649 MIR4511-201ENST00000582784 87 ntBASIC-4.8□□□□□ -3.18
APOEP02649 RNA5SP224-201ENST00000365069 126 ntBASIC-4.81□□□□□ -3.18
APOEP02649 RNU6-794P-201ENST00000517261 64 ntBASIC-4.81□□□□□ -3.18
APOEP02649 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.82□□□□□ -3.18
APOEP02649 SNORD45C-201ENST00000383893 79 ntBASIC-4.83□□□□□ -3.18
APOEP02649 Y_RNA.545-201ENST00000384652 105 ntBASIC-4.86□□□□□ -3.19
APOEP02649 AC103706.3-201ENST00000636297 85 ntBASIC-4.86□□□□□ -3.19
APOEP02649 AC099654.10-201ENST00000640395 161 ntBASIC-4.86□□□□□ -3.19
APOEP02649 RNU6-787P-201ENST00000384032 107 ntBASIC-4.87□□□□□ -3.19
APOEP02649 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.88□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 256.9 ms