Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.76□□□□□ -2.85
ABCA1O95477 MIR548S-201ENST00000581352 82 ntBASIC-2.76□□□□□ -2.85
ABCA1O95477 RNU7-120P-201ENST00000459334 63 ntBASIC-2.76□□□□□ -2.85
ABCA1O95477 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.77□□□□□ -2.85
ABCA1O95477 MIR606-201ENST00000384851 96 ntBASIC-2.77□□□□□ -2.85
ABCA1O95477 RNU6-808P-201ENST00000391233 108 ntBASIC-2.77□□□□□ -2.85
ABCA1O95477 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.78□□□□□ -2.85
ABCA1O95477 MIR569-201ENST00000385228 96 ntBASIC-2.78□□□□□ -2.85
ABCA1O95477 AC008737.2-201ENST00000599446 118 ntBASIC-2.78□□□□□ -2.85
ABCA1O95477 MIR3914-2-201ENST00000637339 95 ntBASIC-2.79□□□□□ -2.86
ABCA1O95477 MTATP8P1-201ENST00000467115 207 ntBASIC-2.79□□□□□ -2.86
ABCA1O95477 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.79□□□□□ -2.86
ABCA1O95477 MTCYBP6-201ENST00000441810 138 ntBASIC-2.8□□□□□ -2.86
ABCA1O95477 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.8□□□□□ -2.86
ABCA1O95477 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.8□□□□□ -2.86
ABCA1O95477 MTCYBP9-201ENST00000431021 303 ntBASIC-2.8□□□□□ -2.86
ABCA1O95477 RNU6-659P-201ENST00000516454 104 ntBASIC-2.8□□□□□ -2.86
ABCA1O95477 MIR494-201ENST00000349529 81 ntBASIC-2.81□□□□□ -2.86
ABCA1O95477 RNU6-797P-201ENST00000363101 109 ntBASIC-2.81□□□□□ -2.86
ABCA1O95477 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.81□□□□□ -2.86
ABCA1O95477 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.81□□□□□ -2.86
ABCA1O95477 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.81□□□□□ -2.86
ABCA1O95477 SNORD116-21-201ENST00000384507 92 ntBASIC-2.82□□□□□ -2.86
ABCA1O95477 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.82□□□□□ -2.86
ABCA1O95477 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.82□□□□□ -2.86
ABCA1O95477 RNU6-497P-201ENST00000365316 104 ntBASIC-2.82□□□□□ -2.86
ABCA1O95477 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.82□□□□□ -2.86
ABCA1O95477 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.83□□□□□ -2.86
ABCA1O95477 RNU6-986P-201ENST00000363133 102 ntBASIC-2.84□□□□□ -2.86
ABCA1O95477 RNU6-663P-201ENST00000391105 106 ntBASIC-2.84□□□□□ -2.86
ABCA1O95477 MIR1302-3-201ENST00000408128 138 ntBASIC-2.84□□□□□ -2.86
ABCA1O95477 RNU6-627P-201ENST00000364032 102 ntBASIC-2.84□□□□□ -2.86
ABCA1O95477 RNU6-122P-201ENST00000516818 107 ntBASIC-2.84□□□□□ -2.86
ABCA1O95477 RNU4-33P-201ENST00000364316 85 ntBASIC-2.85□□□□□ -2.87
ABCA1O95477 SNORD113-1-201ENST00000365321 69 ntBASIC-2.85□□□□□ -2.87
ABCA1O95477 AC004792.1-201ENST00000614523 137 ntBASIC-2.86□□□□□ -2.87
ABCA1O95477 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.86□□□□□ -2.87
ABCA1O95477 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.87□□□□□ -2.87
ABCA1O95477 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.87□□□□□ -2.87
ABCA1O95477 RNU6-804P-201ENST00000384286 107 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 RNU6-257P-201ENST00000410238 98 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 RNU6-255P-201ENST00000516957 105 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 RNU6-315P-201ENST00000362666 107 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 RNU6-200P-201ENST00000364743 107 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 MTND5P41-201ENST00000517498 206 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.88□□□□□ -2.87
ABCA1O95477 SNORA40.13-201ENST00000516379 120 ntBASIC-2.89□□□□□ -2.87
ABCA1O95477 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.89□□□□□ -2.87
ABCA1O95477 MIR548BB-201ENST00000626714 66 ntBASIC-2.89□□□□□ -2.87
ABCA1O95477 RNU6-620P-201ENST00000384017 96 ntBASIC-2.9□□□□□ -2.87
ABCA1O95477 RNU7-200P-201ENST00000516105 62 ntBASIC-2.92□□□□□ -2.88
ABCA1O95477 RNU6-738P-201ENST00000384531 106 ntBASIC-2.93□□□□□ -2.88
ABCA1O95477 RNU6-380P-201ENST00000410207 107 ntBASIC-2.93□□□□□ -2.88
ABCA1O95477 AC044792.1-201ENST00000593294 196 ntBASIC-2.93□□□□□ -2.88
ABCA1O95477 RNU6-907P-201ENST00000390924 102 ntBASIC-2.93□□□□□ -2.88
ABCA1O95477 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.94□□□□□ -2.88
ABCA1O95477 RNU6-209P-201ENST00000384118 107 ntBASIC-2.94□□□□□ -2.88
ABCA1O95477 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.94□□□□□ -2.88
ABCA1O95477 RNU6-109P-201ENST00000516364 107 ntBASIC-2.94□□□□□ -2.88
ABCA1O95477 RNU6-184P-201ENST00000516514 107 ntBASIC-2.94□□□□□ -2.88
ABCA1O95477 SNORA25.4-201ENST00000363666 124 ntBASIC-2.95□□□□□ -2.88
ABCA1O95477 MIR1302-5-201ENST00000408164 150 ntBASIC-2.95□□□□□ -2.88
ABCA1O95477 RNU6-219P-201ENST00000364728 107 ntBASIC-2.96□□□□□ -2.88
ABCA1O95477 RNU6-687P-201ENST00000516443 89 ntBASIC-2.96□□□□□ -2.88
ABCA1O95477 MIR4511-201ENST00000582784 87 ntBASIC-2.96□□□□□ -2.88
ABCA1O95477 RNU6-675P-201ENST00000384236 104 ntBASIC-2.97□□□□□ -2.88
ABCA1O95477 RNU6-59P-201ENST00000384787 107 ntBASIC-2.98□□□□□ -2.89
ABCA1O95477 MIR568-201ENST00000385036 95 ntBASIC-2.98□□□□□ -2.89
ABCA1O95477 RNU6-388P-201ENST00000517012 105 ntBASIC-2.98□□□□□ -2.89
ABCA1O95477 RNU6-389P-201ENST00000517048 105 ntBASIC-2.98□□□□□ -2.89
ABCA1O95477 MT-TG-201ENST00000387429 68 ntBASIC-2.99□□□□□ -2.89
ABCA1O95477 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3□□□□□ -2.89
ABCA1O95477 Y_RNA.506-201ENST00000384494 102 ntBASIC-3□□□□□ -2.89
ABCA1O95477 RNU6-959P-201ENST00000384671 107 ntBASIC-3□□□□□ -2.89
ABCA1O95477 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.02□□□□□ -2.89
ABCA1O95477 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.02□□□□□ -2.89
ABCA1O95477 MIR3134-201ENST00000579433 74 ntBASIC-3.03□□□□□ -2.89
ABCA1O95477 RNU6-446P-201ENST00000362827 106 ntBASIC-3.03□□□□□ -2.89
ABCA1O95477 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.03□□□□□ -2.89
ABCA1O95477 RNU6-844P-201ENST00000517175 102 ntBASIC-3.04□□□□□ -2.9
ABCA1O95477 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.04□□□□□ -2.9
ABCA1O95477 RNU6-787P-201ENST00000384032 107 ntBASIC-3.05□□□□□ -2.9
ABCA1O95477 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.06□□□□□ -2.9
ABCA1O95477 AL031737.1-201ENST00000450125 223 ntBASIC-3.06□□□□□ -2.9
ABCA1O95477 RNU6-634P-201ENST00000459134 106 ntBASIC-3.06□□□□□ -2.9
ABCA1O95477 AC110620.1-201ENST00000416042 228 ntBASIC-3.07□□□□□ -2.9
ABCA1O95477 RNU6-153P-201ENST00000364422 104 ntBASIC-3.08□□□□□ -2.9
ABCA1O95477 RNU6-294P-201ENST00000364999 102 ntBASIC-3.09□□□□□ -2.9
ABCA1O95477 RNU6-327P-201ENST00000516270 127 ntBASIC-3.09□□□□□ -2.9
ABCA1O95477 MALAT1.1-201ENST00000618249 95 ntBASIC-3.09□□□□□ -2.9
ABCA1O95477 RNU6-838P-201ENST00000363399 108 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 SNORD113-4-201ENST00000364802 75 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 RNU6-589P-201ENST00000516485 107 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 SNORD116-14-201ENST00000383894 92 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 SNORD116-17-201ENST00000383929 92 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 SNORD116-15-201ENST00000384445 92 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 SNORD116-19-201ENST00000384729 92 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 RNU7-171P-201ENST00000459581 62 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 AC103706.3-201ENST00000636297 85 ntBASIC-3.1□□□□□ -2.91
ABCA1O95477 AL117351.2-201ENST00000513571 157 ntBASIC-3.12□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms