Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNA5SP86-201ENST00000390869 98 ntBASIC-1.13□□□□□ -2.59
HDAC3O15379 RNU6-300P-201ENST00000459080 104 ntBASIC-1.13□□□□□ -2.59
HDAC3O15379 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.14□□□□□ -2.59
HDAC3O15379 RNU6-10P-201ENST00000384036 107 ntBASIC-1.14□□□□□ -2.59
HDAC3O15379 MIR487B-201ENST00000385021 84 ntBASIC-1.14□□□□□ -2.59
HDAC3O15379 HLA-S-202ENST00000425174 53 ntBASIC-1.14□□□□□ -2.59
HDAC3O15379 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.14□□□□□ -2.59
HDAC3O15379 RNU6-68P-201ENST00000516576 104 ntBASIC-1.15□□□□□ -2.59
HDAC3O15379 MIR409-201ENST00000362237 79 ntBASIC-1.16□□□□□ -2.6
HDAC3O15379 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.16□□□□□ -2.6
HDAC3O15379 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.16□□□□□ -2.6
HDAC3O15379 MIR4770-201ENST00000579149 58 ntBASIC-1.16□□□□□ -2.6
HDAC3O15379 MIR3115-201ENST00000577915 68 ntBASIC-1.17□□□□□ -2.6
HDAC3O15379 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.18□□□□□ -2.6
HDAC3O15379 MIR548H1-201ENST00000408610 102 ntBASIC-1.18□□□□□ -2.6
HDAC3O15379 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.18□□□□□ -2.6
HDAC3O15379 RNU6-841P-201ENST00000383872 107 ntBASIC-1.19□□□□□ -2.6
HDAC3O15379 RNU6-936P-201ENST00000384005 107 ntBASIC-1.19□□□□□ -2.6
HDAC3O15379 snoU13.10-201ENST00000459301 103 ntBASIC-1.2□□□□□ -2.6
HDAC3O15379 MIR548W-201ENST00000581970 74 ntBASIC-1.2□□□□□ -2.6
HDAC3O15379 RNU6-176P-201ENST00000517196 105 ntBASIC-1.21□□□□□ -2.6
HDAC3O15379 MIR3165-201ENST00000579874 75 ntBASIC-1.21□□□□□ -2.6
HDAC3O15379 MIR548AM-201ENST00000584298 74 ntBASIC-1.21□□□□□ -2.6
HDAC3O15379 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.22□□□□□ -2.6
HDAC3O15379 RNU6-614P-201ENST00000384369 107 ntBASIC-1.22□□□□□ -2.6
HDAC3O15379 RNA5SP266-201ENST00000410273 108 ntBASIC-1.22□□□□□ -2.6
HDAC3O15379 MIR548AL-201ENST00000578416 97 ntBASIC-1.22□□□□□ -2.6
HDAC3O15379 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.22□□□□□ -2.6
HDAC3O15379 U6.59-201ENST00000615686 107 ntBASIC-1.22□□□□□ -2.6
HDAC3O15379 RNU6-226P-201ENST00000363778 107 ntBASIC-1.23□□□□□ -2.61
HDAC3O15379 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.23□□□□□ -2.61
HDAC3O15379 MIR548H4-201ENST00000408689 111 ntBASIC-1.24□□□□□ -2.61
HDAC3O15379 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.25□□□□□ -2.61
HDAC3O15379 RNU6-912P-201ENST00000363800 104 ntBASIC-1.25□□□□□ -2.61
HDAC3O15379 RNU6-753P-201ENST00000363926 107 ntBASIC-1.25□□□□□ -2.61
HDAC3O15379 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.25□□□□□ -2.61
HDAC3O15379 MIR4320-201ENST00000636981 65 ntBASIC-1.25□□□□□ -2.61
HDAC3O15379 MIR379-201ENST00000362218 67 ntBASIC-1.26□□□□□ -2.61
HDAC3O15379 RNU6-838P-201ENST00000363399 108 ntBASIC-1.27□□□□□ -2.61
HDAC3O15379 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.28□□□□□ -2.61
HDAC3O15379 MTND4LP19-201ENST00000403051 166 ntBASIC-1.28□□□□□ -2.61
HDAC3O15379 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.29□□□□□ -2.62
HDAC3O15379 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.29□□□□□ -2.62
HDAC3O15379 RNU4-88P-201ENST00000411220 86 ntBASIC-1.3□□□□□ -2.62
HDAC3O15379 MIR4317-201ENST00000637586 65 ntBASIC-1.3□□□□□ -2.62
HDAC3O15379 AC108019.1-201ENST00000512540 175 ntBASIC-1.31□□□□□ -2.62
HDAC3O15379 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.32□□□□□ -2.62
HDAC3O15379 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.32□□□□□ -2.62
HDAC3O15379 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.33□□□□□ -2.62
HDAC3O15379 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.33□□□□□ -2.62
HDAC3O15379 RNU6-808P-201ENST00000391233 108 ntBASIC-1.33□□□□□ -2.62
HDAC3O15379 RNU6-986P-201ENST00000363133 102 ntBASIC-1.34□□□□□ -2.62
HDAC3O15379 SNORD113-3-201ENST00000364830 72 ntBASIC-1.34□□□□□ -2.62
HDAC3O15379 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.34□□□□□ -2.62
HDAC3O15379 MIR548F3-201ENST00000408509 87 ntBASIC-1.34□□□□□ -2.62
HDAC3O15379 MIR4756-201ENST00000577874 78 ntBASIC-1.34□□□□□ -2.62
HDAC3O15379 SNORD18.1-201ENST00000363807 70 ntBASIC-1.35□□□□□ -2.63
HDAC3O15379 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.35□□□□□ -2.63
HDAC3O15379 RNU6-930P-201ENST00000390938 100 ntBASIC-1.35□□□□□ -2.63
HDAC3O15379 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.35□□□□□ -2.63
HDAC3O15379 RNA5SP331-201ENST00000364986 107 ntBASIC-1.37□□□□□ -2.63
HDAC3O15379 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.37□□□□□ -2.63
HDAC3O15379 MIR1254-1-201ENST00000408257 97 ntBASIC-1.37□□□□□ -2.63
HDAC3O15379 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.38□□□□□ -2.63
HDAC3O15379 AC097484.2-201ENST00000509147 251 ntBASIC-1.38□□□□□ -2.63
HDAC3O15379 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.39□□□□□ -2.63
HDAC3O15379 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 SNX3P1X-201ENST00000414887 175 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.4□□□□□ -2.63
HDAC3O15379 AL627230.5-201ENST00000619807 58 ntBASIC-1.41□□□□□ -2.64
HDAC3O15379 RNU6-822P-201ENST00000362707 106 ntBASIC-1.42□□□□□ -2.64
HDAC3O15379 RNA5SP461-201ENST00000516451 104 ntBASIC-1.42□□□□□ -2.64
HDAC3O15379 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.43□□□□□ -2.64
HDAC3O15379 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.43□□□□□ -2.64
HDAC3O15379 FTX_4.1-201ENST00000616291 147 ntBASIC-1.43□□□□□ -2.64
HDAC3O15379 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.43□□□□□ -2.64
HDAC3O15379 MIR545-201ENST00000385085 106 ntBASIC-1.44□□□□□ -2.64
HDAC3O15379 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.44□□□□□ -2.64
HDAC3O15379 MIR664B-201ENST00000626756 61 ntBASIC-1.44□□□□□ -2.64
HDAC3O15379 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.45□□□□□ -2.64
HDAC3O15379 RNU6-59P-201ENST00000384787 107 ntBASIC-1.45□□□□□ -2.64
HDAC3O15379 MIR198-201ENST00000637333 62 ntBASIC-1.45□□□□□ -2.64
HDAC3O15379 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.46□□□□□ -2.64
HDAC3O15379 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.46□□□□□ -2.64
HDAC3O15379 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.46□□□□□ -2.64
HDAC3O15379 MIR601-201ENST00000385256 79 ntBASIC-1.46□□□□□ -2.64
HDAC3O15379 SNORD115.2-201ENST00000391126 59 ntBASIC-1.46□□□□□ -2.64
HDAC3O15379 RNU6-345P-201ENST00000517001 107 ntBASIC-1.46□□□□□ -2.64
HDAC3O15379 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.47□□□□□ -2.64
HDAC3O15379 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.47□□□□□ -2.64
HDAC3O15379 RNA5SP180-201ENST00000516181 101 ntBASIC-1.47□□□□□ -2.64
HDAC3O15379 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.47□□□□□ -2.64
HDAC3O15379 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
HDAC3O15379 RNA5SP224-201ENST00000365069 126 ntBASIC-1.49□□□□□ -2.65
HDAC3O15379 RNU6-983P-201ENST00000516004 103 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 357.8 ms