Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR6874-201ENST00000635894 71 ntBASIC-1.28□□□□□ -2.61
USP44Q9H0E7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.28□□□□□ -2.61
USP44Q9H0E7 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
USP44Q9H0E7 RPL35AP4-201ENST00000412007 102 ntBASIC-1.29□□□□□ -2.62
USP44Q9H0E7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.29□□□□□ -2.62
USP44Q9H0E7 MIR6502-201ENST00000617296 76 ntBASIC-1.29□□□□□ -2.62
USP44Q9H0E7 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.3□□□□□ -2.62
USP44Q9H0E7 MIR548AA1-201ENST00000384971 97 ntBASIC-1.3□□□□□ -2.62
USP44Q9H0E7 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.3□□□□□ -2.62
USP44Q9H0E7 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.3□□□□□ -2.62
USP44Q9H0E7 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.3□□□□□ -2.62
USP44Q9H0E7 SNORA25.4-201ENST00000363666 124 ntBASIC-1.31□□□□□ -2.62
USP44Q9H0E7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.31□□□□□ -2.62
USP44Q9H0E7 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.31□□□□□ -2.62
USP44Q9H0E7 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.31□□□□□ -2.62
USP44Q9H0E7 AC138207.3-201ENST00000585289 166 ntBASIC-1.31□□□□□ -2.62
USP44Q9H0E7 MIR365A-201ENST00000362260 87 ntBASIC-1.32□□□□□ -2.62
USP44Q9H0E7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.32□□□□□ -2.62
USP44Q9H0E7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.32□□□□□ -2.62
USP44Q9H0E7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.32□□□□□ -2.62
USP44Q9H0E7 SNORD60.1-201ENST00000362451 73 ntBASIC-1.33□□□□□ -2.62
USP44Q9H0E7 RNU6-649P-201ENST00000384463 107 ntBASIC-1.33□□□□□ -2.62
USP44Q9H0E7 MIR520D-201ENST00000385002 87 ntBASIC-1.33□□□□□ -2.62
USP44Q9H0E7 AC090616.4-201ENST00000448026 115 ntBASIC-1.33□□□□□ -2.62
USP44Q9H0E7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.33□□□□□ -2.62
USP44Q9H0E7 MIR4662A-201ENST00000637499 67 ntBASIC-1.33□□□□□ -2.62
USP44Q9H0E7 RNU6-776P-201ENST00000364403 104 ntBASIC-1.34□□□□□ -2.62
USP44Q9H0E7 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.34□□□□□ -2.62
USP44Q9H0E7 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.34□□□□□ -2.62
USP44Q9H0E7 AC005520.4-201ENST00000604337 90 ntBASIC-1.34□□□□□ -2.62
USP44Q9H0E7 RNU6-172P-201ENST00000411000 93 ntBASIC-1.35□□□□□ -2.63
USP44Q9H0E7 MIR3170-201ENST00000582699 77 ntBASIC-1.35□□□□□ -2.63
USP44Q9H0E7 U6.111-201ENST00000636093 83 ntBASIC-1.35□□□□□ -2.63
USP44Q9H0E7 RNU6-608P-201ENST00000383927 104 ntBASIC-1.36□□□□□ -2.63
USP44Q9H0E7 RNU6-539P-201ENST00000516665 103 ntBASIC-1.36□□□□□ -2.63
USP44Q9H0E7 MIR1246-201ENST00000636535 73 ntBASIC-1.36□□□□□ -2.63
USP44Q9H0E7 MIR4770-201ENST00000579149 58 ntBASIC-1.37□□□□□ -2.63
USP44Q9H0E7 RNU7-151P-201ENST00000516930 53 ntBASIC-1.38□□□□□ -2.63
USP44Q9H0E7 MIR4441-201ENST00000582623 100 ntBASIC-1.38□□□□□ -2.63
USP44Q9H0E7 SNORA25.5-201ENST00000363782 126 ntBASIC-1.39□□□□□ -2.63
USP44Q9H0E7 SNORD114-3-201ENST00000364969 75 ntBASIC-1.39□□□□□ -2.63
USP44Q9H0E7 RNA5SP86-201ENST00000390869 98 ntBASIC-1.39□□□□□ -2.63
USP44Q9H0E7 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.39□□□□□ -2.63
USP44Q9H0E7 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.39□□□□□ -2.63
USP44Q9H0E7 MIR579-201ENST00000385221 98 ntBASIC-1.4□□□□□ -2.63
USP44Q9H0E7 RNU6-995P-201ENST00000391244 107 ntBASIC-1.4□□□□□ -2.63
USP44Q9H0E7 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.41□□□□□ -2.64
USP44Q9H0E7 MIR4511-201ENST00000582784 87 ntBASIC-1.41□□□□□ -2.64
USP44Q9H0E7 MIR1207-201ENST00000408249 87 ntBASIC-1.42□□□□□ -2.64
USP44Q9H0E7 MIR7978-201ENST00000636158 59 ntBASIC-1.42□□□□□ -2.64
USP44Q9H0E7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.43□□□□□ -2.64
USP44Q9H0E7 RNU6-122P-201ENST00000516818 107 ntBASIC-1.43□□□□□ -2.64
USP44Q9H0E7 RNU6-247P-201ENST00000362636 107 ntBASIC-1.44□□□□□ -2.64
USP44Q9H0E7 MIR487B-201ENST00000385021 84 ntBASIC-1.44□□□□□ -2.64
USP44Q9H0E7 AC103706.3-201ENST00000636297 85 ntBASIC-1.44□□□□□ -2.64
USP44Q9H0E7 RNU6-800P-201ENST00000384473 103 ntBASIC-1.46□□□□□ -2.64
USP44Q9H0E7 RNU6-231P-201ENST00000517122 103 ntBASIC-1.46□□□□□ -2.64
USP44Q9H0E7 MIR7110-201ENST00000612638 86 ntBASIC-1.46□□□□□ -2.64
USP44Q9H0E7 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.46□□□□□ -2.64
USP44Q9H0E7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.47□□□□□ -2.64
USP44Q9H0E7 RNU6-258P-201ENST00000390884 101 ntBASIC-1.47□□□□□ -2.64
USP44Q9H0E7 SNORA72.7-201ENST00000516349 94 ntBASIC-1.47□□□□□ -2.64
USP44Q9H0E7 MIR125B1-201ENST00000385236 88 ntBASIC-1.48□□□□□ -2.65
USP44Q9H0E7 AC018880.2-201ENST00000414265 201 ntBASIC-1.48□□□□□ -2.65
USP44Q9H0E7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.48□□□□□ -2.65
USP44Q9H0E7 MIR548H1-201ENST00000408610 102 ntBASIC-1.49□□□□□ -2.65
USP44Q9H0E7 RNU6-79P-201ENST00000362511 107 ntBASIC-1.5□□□□□ -2.65
USP44Q9H0E7 RNU6-669P-201ENST00000365575 107 ntBASIC-1.5□□□□□ -2.65
USP44Q9H0E7 RNU6-983P-201ENST00000516004 103 ntBASIC-1.5□□□□□ -2.65
USP44Q9H0E7 SNORD63.2-201ENST00000516303 64 ntBASIC-1.5□□□□□ -2.65
USP44Q9H0E7 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.5□□□□□ -2.65
USP44Q9H0E7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.51□□□□□ -2.65
USP44Q9H0E7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.51□□□□□ -2.65
USP44Q9H0E7 SNORD116.2-201ENST00000391251 93 ntBASIC-1.52□□□□□ -2.65
USP44Q9H0E7 RNU7-160P-201ENST00000516660 62 ntBASIC-1.52□□□□□ -2.65
USP44Q9H0E7 RNU6-940P-201ENST00000363433 104 ntBASIC-1.53□□□□□ -2.65
USP44Q9H0E7 RNU6-810P-201ENST00000364001 107 ntBASIC-1.53□□□□□ -2.65
USP44Q9H0E7 MIR23C-201ENST00000579846 100 ntBASIC-1.53□□□□□ -2.65
USP44Q9H0E7 RNY4P27-201ENST00000363341 96 ntBASIC-1.54□□□□□ -2.66
USP44Q9H0E7 RNU6-400P-201ENST00000391173 106 ntBASIC-1.54□□□□□ -2.66
USP44Q9H0E7 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.55□□□□□ -2.66
USP44Q9H0E7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.55□□□□□ -2.66
USP44Q9H0E7 MIR4756-201ENST00000577874 78 ntBASIC-1.55□□□□□ -2.66
USP44Q9H0E7 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.56□□□□□ -2.66
USP44Q9H0E7 SNORA27.2-201ENST00000363365 126 ntBASIC-1.56□□□□□ -2.66
USP44Q9H0E7 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.56□□□□□ -2.66
USP44Q9H0E7 RNU6-563P-201ENST00000364872 108 ntBASIC-1.57□□□□□ -2.66
USP44Q9H0E7 RNU6-974P-201ENST00000384099 108 ntBASIC-1.57□□□□□ -2.66
USP44Q9H0E7 AC114801.3-201ENST00000510231 177 ntBASIC-1.57□□□□□ -2.66
USP44Q9H0E7 AC108019.1-201ENST00000512540 175 ntBASIC-1.57□□□□□ -2.66
USP44Q9H0E7 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.58□□□□□ -2.66
USP44Q9H0E7 SNORA40B-201ENST00000385573 128 ntBASIC-1.59□□□□□ -2.66
USP44Q9H0E7 AC110620.1-201ENST00000416042 228 ntBASIC-1.59□□□□□ -2.66
USP44Q9H0E7 RNU7-119P-201ENST00000459279 63 ntBASIC-1.59□□□□□ -2.66
USP44Q9H0E7 AC120024.2-201ENST00000576526 175 ntBASIC-1.59□□□□□ -2.66
USP44Q9H0E7 MIR466-201ENST00000580653 84 ntBASIC-1.59□□□□□ -2.66
USP44Q9H0E7 SNORA40.16-201ENST00000517238 121 ntBASIC-1.6□□□□□ -2.67
USP44Q9H0E7 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.61□□□□□ -2.67
USP44Q9H0E7 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.61□□□□□ -2.67
USP44Q9H0E7 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms