Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 RNU6-598P-201ENST00000364017 105 ntBASIC-1.36□□□□□ -2.63
TRIM9Q9C026 SNORD113-2-201ENST00000391082 72 ntBASIC-1.36□□□□□ -2.63
TRIM9Q9C026 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.36□□□□□ -2.63
TRIM9Q9C026 RNU6-294P-201ENST00000364999 102 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 RNU6-242P-201ENST00000384359 107 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 MIR450A2-201ENST00000385022 100 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 RNU6-70P-201ENST00000516438 60 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.38□□□□□ -2.63
TRIM9Q9C026 RNU6-630P-201ENST00000391258 106 ntBASIC-1.38□□□□□ -2.63
TRIM9Q9C026 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.38□□□□□ -2.63
TRIM9Q9C026 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.38□□□□□ -2.63
TRIM9Q9C026 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 RNA5SP173-201ENST00000364857 136 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 U2.18-201ENST00000622185 84 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.4□□□□□ -2.63
TRIM9Q9C026 MIR154-201ENST00000385243 84 ntBASIC-1.4□□□□□ -2.63
TRIM9Q9C026 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.4□□□□□ -2.63
TRIM9Q9C026 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.41□□□□□ -2.64
TRIM9Q9C026 AC018880.2-201ENST00000414265 201 ntBASIC-1.41□□□□□ -2.64
TRIM9Q9C026 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 SNORD116-16-201ENST00000384533 92 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 MIR5582-201ENST00000579697 68 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.43□□□□□ -2.64
TRIM9Q9C026 RNU6-608P-201ENST00000383927 104 ntBASIC-1.43□□□□□ -2.64
TRIM9Q9C026 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.43□□□□□ -2.64
TRIM9Q9C026 RNU6-79P-201ENST00000362511 107 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 RNU6-895P-201ENST00000384125 103 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 MIR4666B-201ENST00000578142 81 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 MIR548AA1-201ENST00000384971 97 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 RNU6-400P-201ENST00000391173 106 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 MIR3134-201ENST00000579433 74 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 SNORA41B-201ENST00000384785 128 ntBASIC-1.46□□□□□ -2.64
TRIM9Q9C026 RNU6-194P-201ENST00000363862 105 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 SNORD115-31-201ENST00000365318 82 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 SNORD116-24-201ENST00000384549 92 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 RNU6-803P-201ENST00000516034 102 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.47□□□□□ -2.64
TRIM9Q9C026 MIR3170-201ENST00000582699 77 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 RNU6-787P-201ENST00000384032 107 ntBASIC-1.48□□□□□ -2.65
TRIM9Q9C026 RNU6-247P-201ENST00000362636 107 ntBASIC-1.49□□□□□ -2.65
TRIM9Q9C026 SNORD1B-201ENST00000363091 84 ntBASIC-1.49□□□□□ -2.65
TRIM9Q9C026 MIR23C-201ENST00000579846 100 ntBASIC-1.49□□□□□ -2.65
TRIM9Q9C026 RNU6-820P-201ENST00000384273 107 ntBASIC-1.5□□□□□ -2.65
TRIM9Q9C026 AC062037.1-201ENST00000605302 128 ntBASIC-1.5□□□□□ -2.65
TRIM9Q9C026 RNU6-995P-201ENST00000391244 107 ntBASIC-1.51□□□□□ -2.65
TRIM9Q9C026 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
TRIM9Q9C026 RNU6-687P-201ENST00000516443 89 ntBASIC-1.52□□□□□ -2.65
TRIM9Q9C026 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.53□□□□□ -2.65
TRIM9Q9C026 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.53□□□□□ -2.65
TRIM9Q9C026 RNU6-230P-201ENST00000362457 104 ntBASIC-1.54□□□□□ -2.66
TRIM9Q9C026 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
TRIM9Q9C026 RNU7-151P-201ENST00000516930 53 ntBASIC-1.54□□□□□ -2.66
TRIM9Q9C026 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.55□□□□□ -2.66
TRIM9Q9C026 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.55□□□□□ -2.66
TRIM9Q9C026 RNU6-695P-201ENST00000391157 104 ntBASIC-1.56□□□□□ -2.66
TRIM9Q9C026 RNU6-172P-201ENST00000411000 93 ntBASIC-1.56□□□□□ -2.66
TRIM9Q9C026 RNU6-563P-201ENST00000364872 108 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 RNU6-411P-201ENST00000384451 107 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 MIR579-201ENST00000385221 98 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 RNU6-542P-201ENST00000516405 103 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 AC120024.2-201ENST00000576526 175 ntBASIC-1.58□□□□□ -2.66
TRIM9Q9C026 U7.4-201ENST00000614961 63 ntBASIC-1.58□□□□□ -2.66
TRIM9Q9C026 RNU6-258P-201ENST00000390884 101 ntBASIC-1.59□□□□□ -2.66
TRIM9Q9C026 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.59□□□□□ -2.66
TRIM9Q9C026 SNORD63.2-201ENST00000516303 64 ntBASIC-1.6□□□□□ -2.67
TRIM9Q9C026 RNU6-92P-201ENST00000605893 104 ntBASIC-1.6□□□□□ -2.67
TRIM9Q9C026 RNA5SP170-201ENST00000517150 101 ntBASIC-1.61□□□□□ -2.67
TRIM9Q9C026 MIR7978-201ENST00000636158 59 ntBASIC-1.61□□□□□ -2.67
TRIM9Q9C026 RNU6-669P-201ENST00000365575 107 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
TRIM9Q9C026 MIR3123-201ENST00000583417 75 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 SNORA27.2-201ENST00000363365 126 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 SNORD73B-201ENST00000364394 72 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 RNU4-88P-201ENST00000411220 86 ntBASIC-1.64□□□□□ -2.67
TRIM9Q9C026 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.64□□□□□ -2.67
TRIM9Q9C026 RNU6-841P-201ENST00000383872 107 ntBASIC-1.65□□□□□ -2.67
TRIM9Q9C026 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.66□□□□□ -2.68
TRIM9Q9C026 RNU6-634P-201ENST00000459134 106 ntBASIC-1.66□□□□□ -2.68
TRIM9Q9C026 MIR548AM-201ENST00000584298 74 ntBASIC-1.66□□□□□ -2.68
TRIM9Q9C026 SNORD60.1-201ENST00000362451 73 ntBASIC-1.67□□□□□ -2.68
TRIM9Q9C026 RNU6-573P-201ENST00000383938 106 ntBASIC-1.67□□□□□ -2.68
TRIM9Q9C026 MIR125B1-201ENST00000385236 88 ntBASIC-1.67□□□□□ -2.68
TRIM9Q9C026 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms