Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.35□□□□□ -2.63
SCN2AQ99250 RNU6-608P-201ENST00000383927 104 ntBASIC-1.35□□□□□ -2.63
SCN2AQ99250 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.35□□□□□ -2.63
SCN2AQ99250 RNU6-895P-201ENST00000384125 103 ntBASIC-1.35□□□□□ -2.63
SCN2AQ99250 RNU6-695P-201ENST00000391157 104 ntBASIC-1.35□□□□□ -2.63
SCN2AQ99250 RNU6-228P-201ENST00000362700 106 ntBASIC-1.36□□□□□ -2.63
SCN2AQ99250 MIR23C-201ENST00000579846 100 ntBASIC-1.36□□□□□ -2.63
SCN2AQ99250 RNU6-411P-201ENST00000384451 107 ntBASIC-1.37□□□□□ -2.63
SCN2AQ99250 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.37□□□□□ -2.63
SCN2AQ99250 MIR6502-201ENST00000617296 76 ntBASIC-1.37□□□□□ -2.63
SCN2AQ99250 SNORA26.2-201ENST00000390922 122 ntBASIC-1.37□□□□□ -2.63
SCN2AQ99250 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.38□□□□□ -2.63
SCN2AQ99250 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.38□□□□□ -2.63
SCN2AQ99250 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 SNORD116-24-201ENST00000384549 92 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 RNU6-634P-201ENST00000459134 106 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 RNU6-79P-201ENST00000362511 107 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 SNORA25.4-201ENST00000363666 124 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 RNU6-242P-201ENST00000384359 107 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 RNU6-400P-201ENST00000391173 106 ntBASIC-1.39□□□□□ -2.63
SCN2AQ99250 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.4□□□□□ -2.63
SCN2AQ99250 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.4□□□□□ -2.63
SCN2AQ99250 RNU6-995P-201ENST00000391244 107 ntBASIC-1.41□□□□□ -2.64
SCN2AQ99250 RNU6-669P-201ENST00000365575 107 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 MIR520D-201ENST00000385002 87 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 MIR1302-4-201ENST00000408701 150 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 MIR3134-201ENST00000579433 74 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 RPL35AP4-201ENST00000412007 102 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 MIR7978-201ENST00000636158 59 ntBASIC-1.42□□□□□ -2.64
SCN2AQ99250 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
SCN2AQ99250 MIR4679-1-201ENST00000637619 75 ntBASIC-1.43□□□□□ -2.64
SCN2AQ99250 RNU6-857P-201ENST00000515893 110 ntBASIC-1.44□□□□□ -2.64
SCN2AQ99250 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.44□□□□□ -2.64
SCN2AQ99250 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 RNU6-983P-201ENST00000516004 103 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 RNU6-687P-201ENST00000516443 89 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.45□□□□□ -2.64
SCN2AQ99250 RNY4P29-201ENST00000410801 97 ntBASIC-1.46□□□□□ -2.64
SCN2AQ99250 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.47□□□□□ -2.64
SCN2AQ99250 RNU6-540P-201ENST00000384622 101 ntBASIC-1.47□□□□□ -2.64
SCN2AQ99250 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.47□□□□□ -2.64
SCN2AQ99250 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.47□□□□□ -2.65
SCN2AQ99250 RNA5SP170-201ENST00000517150 101 ntBASIC-1.47□□□□□ -2.65
SCN2AQ99250 RNU6-598P-201ENST00000364017 105 ntBASIC-1.48□□□□□ -2.65
SCN2AQ99250 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.48□□□□□ -2.65
SCN2AQ99250 MIR579-201ENST00000385221 98 ntBASIC-1.48□□□□□ -2.65
SCN2AQ99250 MIR125B1-201ENST00000385236 88 ntBASIC-1.48□□□□□ -2.65
SCN2AQ99250 RNU6-172P-201ENST00000411000 93 ntBASIC-1.48□□□□□ -2.65
SCN2AQ99250 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.48□□□□□ -2.65
SCN2AQ99250 RNU6-871P-201ENST00000516122 100 ntBASIC-1.49□□□□□ -2.65
SCN2AQ99250 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.49□□□□□ -2.65
SCN2AQ99250 SNORD63.2-201ENST00000516303 64 ntBASIC-1.49□□□□□ -2.65
SCN2AQ99250 RNU6-523P-201ENST00000516304 54 ntBASIC-1.49□□□□□ -2.65
SCN2AQ99250 RNU6-563P-201ENST00000364872 108 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 RNU6-649P-201ENST00000384463 107 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 SNORA40B-201ENST00000385573 128 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 SNORD116.2-201ENST00000391251 93 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 RNU7-160P-201ENST00000516660 62 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 MIR4511-201ENST00000582784 87 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 RNU6-539P-201ENST00000516665 103 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 MIR6874-201ENST00000635894 71 ntBASIC-1.5□□□□□ -2.65
SCN2AQ99250 SNORA27.2-201ENST00000363365 126 ntBASIC-1.52□□□□□ -2.65
SCN2AQ99250 SNORD73B-201ENST00000364394 72 ntBASIC-1.52□□□□□ -2.65
SCN2AQ99250 MIR3938-201ENST00000582157 103 ntBASIC-1.52□□□□□ -2.65
SCN2AQ99250 MIR664B-201ENST00000626756 61 ntBASIC-1.52□□□□□ -2.65
SCN2AQ99250 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.53□□□□□ -2.65
SCN2AQ99250 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.53□□□□□ -2.65
SCN2AQ99250 MIR7110-201ENST00000612638 86 ntBASIC-1.53□□□□□ -2.65
SCN2AQ99250 RNY4P7-201ENST00000364600 96 ntBASIC-1.54□□□□□ -2.66
SCN2AQ99250 RNU6-520P-201ENST00000384717 104 ntBASIC-1.54□□□□□ -2.66
SCN2AQ99250 RNU6-841P-201ENST00000383872 107 ntBASIC-1.55□□□□□ -2.66
SCN2AQ99250 RNU7-119P-201ENST00000459279 63 ntBASIC-1.55□□□□□ -2.66
SCN2AQ99250 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.55□□□□□ -2.66
SCN2AQ99250 SNORD18C-201ENST00000362704 69 ntBASIC-1.56□□□□□ -2.66
SCN2AQ99250 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.56□□□□□ -2.66
SCN2AQ99250 SNORD78.1-201ENST00000390866 65 ntBASIC-1.56□□□□□ -2.66
SCN2AQ99250 MIR548H1-201ENST00000408610 102 ntBASIC-1.56□□□□□ -2.66
SCN2AQ99250 SNORD60-201ENST00000383903 83 ntBASIC-1.56□□□□□ -2.66
SCN2AQ99250 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.57□□□□□ -2.66
SCN2AQ99250 MIR379-201ENST00000362218 67 ntBASIC-1.57□□□□□ -2.66
SCN2AQ99250 SNORD18.1-201ENST00000363807 70 ntBASIC-1.57□□□□□ -2.66
SCN2AQ99250 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.57□□□□□ -2.66
SCN2AQ99250 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.57□□□□□ -2.66
SCN2AQ99250 RNU6-810P-201ENST00000364001 107 ntBASIC-1.59□□□□□ -2.66
SCN2AQ99250 RNU6-974P-201ENST00000384099 108 ntBASIC-1.59□□□□□ -2.66
SCN2AQ99250 SNORA40.16-201ENST00000517238 121 ntBASIC-1.59□□□□□ -2.66
SCN2AQ99250 RNU6-471P-201ENST00000383944 106 ntBASIC-1.59□□□□□ -2.66
SCN2AQ99250 SNORD30.1-201ENST00000391309 70 ntBASIC-1.59□□□□□ -2.66
SCN2AQ99250 RNY3P8-201ENST00000411366 126 ntBASIC-1.59□□□□□ -2.66
SCN2AQ99250 RNU6-258P-201ENST00000390884 101 ntBASIC-1.6□□□□□ -2.67
SCN2AQ99250 MIR3123-201ENST00000583417 75 ntBASIC-1.6□□□□□ -2.67
SCN2AQ99250 MIR548N-201ENST00000408742 75 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms