Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MT-TR-201ENST00000387439 65 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 RNU7-151P-201ENST00000516930 53 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.68□□□□□ -2.84
RPRD1AQ96P16 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.68□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.69□□□□□ -2.84
RPRD1AQ96P16 AC005520.4-201ENST00000604337 90 ntBASIC-2.69□□□□□ -2.84
RPRD1AQ96P16 RNU6-147P-201ENST00000383983 107 ntBASIC-2.7□□□□□ -2.84
RPRD1AQ96P16 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.7□□□□□ -2.84
RPRD1AQ96P16 MIR5588-201ENST00000581890 63 ntBASIC-2.7□□□□□ -2.84
RPRD1AQ96P16 SNORD115-31-201ENST00000365318 82 ntBASIC-2.71□□□□□ -2.84
RPRD1AQ96P16 MIR579-201ENST00000385221 98 ntBASIC-2.71□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 RNU6-172P-201ENST00000411000 93 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 MIR548W-201ENST00000581970 74 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 IGLL4P-201ENST00000614590 133 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 RNU6-669P-201ENST00000365575 107 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 SNORD116-24-201ENST00000384549 92 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 SNORD63.2-201ENST00000516303 64 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 MIR7978-201ENST00000636158 59 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 SNORA27.2-201ENST00000363365 126 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 RNY1P1-201ENST00000364372 112 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 MIR3910-1-201ENST00000580936 111 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 U6.97-201ENST00000636904 101 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 MIR154-201ENST00000385243 84 ntBASIC-2.75□□□□□ -2.85
RPRD1AQ96P16 snoU13.10-201ENST00000459301 103 ntBASIC-2.75□□□□□ -2.85
RPRD1AQ96P16 RNU6-979P-201ENST00000383896 107 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 RNU6-895P-201ENST00000384125 103 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 RNU6-70P-201ENST00000516438 60 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.77□□□□□ -2.85
RPRD1AQ96P16 SNORD54-201ENST00000459159 67 ntBASIC-2.78□□□□□ -2.85
RPRD1AQ96P16 MIR4712-201ENST00000583750 82 ntBASIC-2.78□□□□□ -2.85
RPRD1AQ96P16 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.79□□□□□ -2.86
RPRD1AQ96P16 RNU6-49P-201ENST00000384256 107 ntBASIC-2.79□□□□□ -2.86
RPRD1AQ96P16 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.79□□□□□ -2.86
RPRD1AQ96P16 MIR125B1-201ENST00000385236 88 ntBASIC-2.8□□□□□ -2.86
RPRD1AQ96P16 SNORD113-1-201ENST00000365321 69 ntBASIC-2.81□□□□□ -2.86
RPRD1AQ96P16 RNY3P8-201ENST00000411366 126 ntBASIC-2.81□□□□□ -2.86
RPRD1AQ96P16 RNU6-789P-201ENST00000517105 102 ntBASIC-2.81□□□□□ -2.86
RPRD1AQ96P16 RNU6-523P-201ENST00000516304 54 ntBASIC-2.82□□□□□ -2.86
RPRD1AQ96P16 MIR1245B-201ENST00000636115 69 ntBASIC-2.82□□□□□ -2.86
RPRD1AQ96P16 RNU7-171P-201ENST00000459581 62 ntBASIC-2.83□□□□□ -2.86
RPRD1AQ96P16 RNU6-215P-201ENST00000365169 102 ntBASIC-2.84□□□□□ -2.86
RPRD1AQ96P16 MIR466-201ENST00000580653 84 ntBASIC-2.84□□□□□ -2.86
RPRD1AQ96P16 RNA5SP93-201ENST00000362525 114 ntBASIC-2.85□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.85□□□□□ -2.87
RPRD1AQ96P16 RNU6-974P-201ENST00000384099 108 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 RNU6-542P-201ENST00000516405 103 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 RNU6-919P-201ENST00000516731 104 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 MIR4748-201ENST00000578076 82 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 RNU6-92P-201ENST00000605893 104 ntBASIC-2.87□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.88□□□□□ -2.87
RPRD1AQ96P16 SNORD20-201ENST00000384550 80 ntBASIC-2.88□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 MIR3134-201ENST00000579433 74 ntBASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 MIR548AI-201ENST00000579940 88 ntBASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 MIR581-201ENST00000384895 96 ntBASIC-2.9□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.91□□□□□ -2.88
RPRD1AQ96P16 RNU6-687P-201ENST00000516443 89 ntBASIC-2.92□□□□□ -2.88
RPRD1AQ96P16 RNU7-160P-201ENST00000516660 62 ntBASIC-2.92□□□□□ -2.88
RPRD1AQ96P16 SNORD18C-201ENST00000362704 69 ntBASIC-2.93□□□□□ -2.88
RPRD1AQ96P16 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.93□□□□□ -2.88
RPRD1AQ96P16 RNA5SP89-201ENST00000410300 108 ntBASIC-2.94□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.95□□□□□ -2.88
RPRD1AQ96P16 FTX_4.1-201ENST00000616291 147 ntBASIC-2.95□□□□□ -2.88
RPRD1AQ96P16 SNORD60.1-201ENST00000362451 73 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 AL606753.1-201ENST00000427435 87 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 AC097484.2-201ENST00000509147 251 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.97□□□□□ -2.88
RPRD1AQ96P16 MIR7110-201ENST00000612638 86 ntBASIC-2.97□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 RNU6-828P-201ENST00000364876 107 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 RNU6-242P-201ENST00000384359 107 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 RNU6-520P-201ENST00000384717 104 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 MIR494-201ENST00000349529 81 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.403-201ENST00000383977 101 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 RNU6-44P-201ENST00000384045 107 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 RNU6-231P-201ENST00000517122 103 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 RNU6-810P-201ENST00000364001 107 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 RNY4P7-201ENST00000364600 96 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.02□□□□□ -2.89
RPRD1AQ96P16 MIR4666B-201ENST00000578142 81 ntBASIC-3.02□□□□□ -2.89
RPRD1AQ96P16 MIR202-201ENST00000362219 110 ntBASIC-3.03□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.03□□□□□ -2.89
RPRD1AQ96P16 RNY4P30-201ENST00000410216 95 ntBASIC-3.03□□□□□ -2.89
RPRD1AQ96P16 RNU6-411P-201ENST00000384451 107 ntBASIC-3.04□□□□□ -2.9
RPRD1AQ96P16 MIR548N-201ENST00000408742 75 ntBASIC-3.04□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 1764.5 ms