Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-219P-201ENST00000364728 107 ntBASIC-4.83□□□□□ -3.18
CFAP54Q96N23 Y_RNA.276-201ENST00000364732 109 ntBASIC-4.83□□□□□ -3.18
CFAP54Q96N23 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-4.84□□□□□ -3.18
CFAP54Q96N23 RN7SKP298-201ENST00000515950 94 ntBASIC-4.84□□□□□ -3.18
CFAP54Q96N23 MIR3915-201ENST00000578518 97 ntBASIC-4.84□□□□□ -3.18
CFAP54Q96N23 SNORA26.8-201ENST00000391306 124 ntBASIC-4.85□□□□□ -3.19
CFAP54Q96N23 RNU6-823P-201ENST00000391042 103 ntBASIC-4.85□□□□□ -3.19
CFAP54Q96N23 MTND4P17-201ENST00000470444 350 ntBASIC-4.85□□□□□ -3.19
CFAP54Q96N23 RNU6-294P-201ENST00000364999 102 ntBASIC-4.86□□□□□ -3.19
CFAP54Q96N23 AL157777.2-201ENST00000258070 137 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 SNORD33.1-201ENST00000516213 88 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 AC113139.1-201ENST00000605049 239 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 MIR1302-11-201ENST00000408051 138 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 MIR1302-9-201ENST00000408365 138 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 MIR1302-10-201ENST00000408734 138 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 MIR1252-201ENST00000408861 65 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 MIR1302-2-201ENST00000607096 138 ntBASIC-4.87□□□□□ -3.19
CFAP54Q96N23 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.88□□□□□ -3.19
CFAP54Q96N23 MTND4LP32-201ENST00000636111 270 ntBASIC-4.88□□□□□ -3.19
CFAP54Q96N23 RNU6-1091P-201ENST00000363945 107 ntBASIC-4.88□□□□□ -3.19
CFAP54Q96N23 Y_RNA.693-201ENST00000516641 110 ntBASIC-4.88□□□□□ -3.19
CFAP54Q96N23 RNU7-30P-201ENST00000516835 62 ntBASIC-4.89□□□□□ -3.19
CFAP54Q96N23 RNU6-483P-201ENST00000384088 108 ntBASIC-4.9□□□□□ -3.19
CFAP54Q96N23 RNU6-109P-201ENST00000516364 107 ntBASIC-4.9□□□□□ -3.19
CFAP54Q96N23 RNU6-184P-201ENST00000516514 107 ntBASIC-4.9□□□□□ -3.19
CFAP54Q96N23 MIR3134-201ENST00000579433 74 ntBASIC-4.9□□□□□ -3.19
CFAP54Q96N23 Y_RNA.252-201ENST00000364556 101 ntBASIC-4.91□□□□□ -3.19
CFAP54Q96N23 AC114801.3-201ENST00000510231 177 ntBASIC-4.91□□□□□ -3.19
CFAP54Q96N23 MIR548BB-201ENST00000626714 66 ntBASIC-4.91□□□□□ -3.19
CFAP54Q96N23 RNU6-634P-201ENST00000459134 106 ntBASIC-4.93□□□□□ -3.2
CFAP54Q96N23 MIR4643-201ENST00000577473 78 ntBASIC-4.93□□□□□ -3.2
CFAP54Q96N23 SNORD113-6-201ENST00000363345 75 ntBASIC-4.93□□□□□ -3.2
CFAP54Q96N23 SNORA81.3-201ENST00000517283 198 ntBASIC-4.93□□□□□ -3.2
CFAP54Q96N23 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.94□□□□□ -3.2
CFAP54Q96N23 Y_RNA.645-201ENST00000391229 102 ntBASIC-4.94□□□□□ -3.2
CFAP54Q96N23 Y_RNA.89-201ENST00000363031 102 ntBASIC-4.95□□□□□ -3.2
CFAP54Q96N23 MIR1302-5-201ENST00000408164 150 ntBASIC-4.95□□□□□ -3.2
CFAP54Q96N23 RNU6-232P-201ENST00000517144 64 ntBASIC-4.95□□□□□ -3.2
CFAP54Q96N23 RNU6-81P-201ENST00000365608 104 ntBASIC-4.95□□□□□ -3.2
CFAP54Q96N23 SNORD116-29-201ENST00000384516 83 ntBASIC-4.95□□□□□ -3.2
CFAP54Q96N23 RNU6-675P-201ENST00000384236 104 ntBASIC-4.96□□□□□ -3.2
CFAP54Q96N23 RNU7-107P-201ENST00000459121 61 ntBASIC-4.96□□□□□ -3.2
CFAP54Q96N23 Y_RNA.516-201ENST00000384541 124 ntBASIC-4.97□□□□□ -3.2
CFAP54Q96N23 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-4.97□□□□□ -3.2
CFAP54Q96N23 Y_RNA.259-201ENST00000364619 101 ntBASIC-4.97□□□□□ -3.21
CFAP54Q96N23 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.97□□□□□ -3.21
CFAP54Q96N23 RNU4-71P-201ENST00000516258 113 ntBASIC-4.98□□□□□ -3.21
CFAP54Q96N23 RNU7-152P-201ENST00000458982 64 ntBASIC-4.98□□□□□ -3.21
CFAP54Q96N23 Y_RNA.277-201ENST00000364754 102 ntBASIC-4.98□□□□□ -3.21
CFAP54Q96N23 SNORD116-4-201ENST00000384733 96 ntBASIC-4.99□□□□□ -3.21
CFAP54Q96N23 RNU6-485P-201ENST00000363475 107 ntBASIC-4.99□□□□□ -3.21
CFAP54Q96N23 U6.95-201ENST00000636931 70 ntBASIC-4.99□□□□□ -3.21
CFAP54Q96N23 Y_RNA.94-201ENST00000363068 106 ntBASIC-5□□□□□ -3.21
CFAP54Q96N23 RNU6-844P-201ENST00000517175 102 ntBASIC-5□□□□□ -3.21
CFAP54Q96N23 AC044792.1-201ENST00000593294 196 ntBASIC-5□□□□□ -3.21
CFAP54Q96N23 RNU4-14P-201ENST00000410858 122 ntBASIC-5.01□□□□□ -3.21
CFAP54Q96N23 Y_RNA.58-201ENST00000362807 102 ntBASIC-5.02□□□□□ -3.21
CFAP54Q96N23 MIR4509-3-201ENST00000578671 94 ntBASIC-5.02□□□□□ -3.21
CFAP54Q96N23 MIR4509-2-201ENST00000583920 94 ntBASIC-5.02□□□□□ -3.21
CFAP54Q96N23 MIR4509-1-201ENST00000618224 94 ntBASIC-5.02□□□□□ -3.21
CFAP54Q96N23 RNU6-539P-201ENST00000516665 103 ntBASIC-5.03□□□□□ -3.21
CFAP54Q96N23 SNORD116-21-201ENST00000384507 92 ntBASIC-5.03□□□□□ -3.22
CFAP54Q96N23 AC109635.3-201ENST00000529536 185 ntBASIC-5.04□□□□□ -3.22
CFAP54Q96N23 Y_RNA.626-201ENST00000411288 95 ntBASIC-5.05□□□□□ -3.22
CFAP54Q96N23 RNU7-125P-201ENST00000458760 62 ntBASIC-5.06□□□□□ -3.22
CFAP54Q96N23 SNORA40.13-201ENST00000516379 120 ntBASIC-5.06□□□□□ -3.22
CFAP54Q96N23 SNORD111B-201ENST00000408587 80 ntBASIC-5.06□□□□□ -3.22
CFAP54Q96N23 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-5.06□□□□□ -3.22
CFAP54Q96N23 Y_RNA.26-201ENST00000362539 101 ntBASIC-5.07□□□□□ -3.22
CFAP54Q96N23 Y_RNA.210-201ENST00000364161 110 ntBASIC-5.07□□□□□ -3.22
CFAP54Q96N23 Y_RNA.579-201ENST00000390939 94 ntBASIC-5.07□□□□□ -3.22
CFAP54Q96N23 Y_RNA.573-201ENST00000384763 105 ntBASIC-5.08□□□□□ -3.22
CFAP54Q96N23 RNU6-871P-201ENST00000516122 100 ntBASIC-5.08□□□□□ -3.22
CFAP54Q96N23 SNORD113-4-201ENST00000364802 75 ntBASIC-5.08□□□□□ -3.22
CFAP54Q96N23 SNORD30.1-201ENST00000391309 70 ntBASIC-5.08□□□□□ -3.22
CFAP54Q96N23 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.09□□□□□ -3.22
CFAP54Q96N23 DLEU2_1.1-201ENST00000612089 120 ntBASIC-5.09□□□□□ -3.22
CFAP54Q96N23 RNU6-446P-201ENST00000362827 106 ntBASIC-5.09□□□□□ -3.22
CFAP54Q96N23 RNU6-829P-201ENST00000363700 112 ntBASIC-5.09□□□□□ -3.22
CFAP54Q96N23 MIR3914-2-201ENST00000637339 95 ntBASIC-5.1□□□□□ -3.23
CFAP54Q96N23 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.1□□□□□ -3.23
CFAP54Q96N23 U7.4-201ENST00000614961 63 ntBASIC-5.1□□□□□ -3.23
CFAP54Q96N23 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.1□□□□□ -3.23
CFAP54Q96N23 SNORD116-18-201ENST00000383961 92 ntBASIC-5.11□□□□□ -3.23
CFAP54Q96N23 RNU7-171P-201ENST00000459581 62 ntBASIC-5.12□□□□□ -3.23
CFAP54Q96N23 MIR3611-201ENST00000584484 83 ntBASIC-5.12□□□□□ -3.23
CFAP54Q96N23 RNU6-277P-201ENST00000516272 106 ntBASIC-5.13□□□□□ -3.23
CFAP54Q96N23 MIR4712-201ENST00000583750 82 ntBASIC-5.13□□□□□ -3.23
CFAP54Q96N23 RNU5A-2P-201ENST00000384337 116 ntBASIC-5.13□□□□□ -3.23
CFAP54Q96N23 MIR548X2-201ENST00000579776 100 ntBASIC-5.13□□□□□ -3.23
CFAP54Q96N23 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-5.14□□□□□ -3.23
CFAP54Q96N23 Y_RNA.712-201ENST00000517011 92 ntBASIC-5.16□□□□□ -3.24
CFAP54Q96N23 AC113195.1-201ENST00000579952 141 ntBASIC-5.16□□□□□ -3.24
CFAP54Q96N23 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.17□□□□□ -3.24
CFAP54Q96N23 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.17□□□□□ -3.24
CFAP54Q96N23 AC004792.1-201ENST00000614523 137 ntBASIC-5.17□□□□□ -3.24
CFAP54Q96N23 MALAT1.1-201ENST00000618249 95 ntBASIC-5.17□□□□□ -3.24
CFAP54Q96N23 RNU6-713P-201ENST00000384761 107 ntBASIC-5.17□□□□□ -3.24
CFAP54Q96N23 Y_RNA.662-201ENST00000516028 97 ntBASIC-5.17□□□□□ -3.24
CFAP54Q96N23 DEFB108C-201ENST00000400154 252 ntBASIC-5.18□□□□□ -3.24
Retrieved 100 of 98,524 protein–RNA pairs in 289.3 ms