Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 SNORD114-15-201ENST00000364687 72 ntBASIC-0.89□□□□□ -2.55
VPS53Q5VIR6 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.89□□□□□ -2.55
VPS53Q5VIR6 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.89□□□□□ -2.55
VPS53Q5VIR6 MIR6086-201ENST00000638065 55 ntBASIC-0.89□□□□□ -2.55
VPS53Q5VIR6 RNU6-446P-201ENST00000362827 106 ntBASIC-0.9□□□□□ -2.55
VPS53Q5VIR6 RNU6-608P-201ENST00000383927 104 ntBASIC-0.9□□□□□ -2.55
VPS53Q5VIR6 snoU83B.1-201ENST00000517136 88 ntBASIC-0.9□□□□□ -2.55
VPS53Q5VIR6 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.91□□□□□ -2.56
VPS53Q5VIR6 MIR633-201ENST00000384821 98 ntBASIC-0.91□□□□□ -2.56
VPS53Q5VIR6 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.91□□□□□ -2.56
VPS53Q5VIR6 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.91□□□□□ -2.56
VPS53Q5VIR6 SNORD63.2-201ENST00000516303 64 ntBASIC-0.92□□□□□ -2.56
VPS53Q5VIR6 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.92□□□□□ -2.56
VPS53Q5VIR6 RNA5SP26-201ENST00000362406 119 ntBASIC-0.93□□□□□ -2.56
VPS53Q5VIR6 RNU6-829P-201ENST00000363700 112 ntBASIC-0.93□□□□□ -2.56
VPS53Q5VIR6 RNU6-499P-201ENST00000365615 107 ntBASIC-0.93□□□□□ -2.56
VPS53Q5VIR6 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.94□□□□□ -2.56
VPS53Q5VIR6 SNORD95.1-201ENST00000364099 68 ntBASIC-0.94□□□□□ -2.56
VPS53Q5VIR6 AC079150.2-201ENST00000443733 78 ntBASIC-0.94□□□□□ -2.56
VPS53Q5VIR6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
VPS53Q5VIR6 MIR6818-201ENST00000621576 65 ntBASIC-0.95□□□□□ -2.56
VPS53Q5VIR6 SNORA27.2-201ENST00000363365 126 ntBASIC-0.96□□□□□ -2.56
VPS53Q5VIR6 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.96□□□□□ -2.56
VPS53Q5VIR6 RNU6-258P-201ENST00000390884 101 ntBASIC-0.97□□□□□ -2.56
VPS53Q5VIR6 RNU4-63P-201ENST00000411313 118 ntBASIC-0.97□□□□□ -2.56
VPS53Q5VIR6 snoU13.19-201ENST00000459148 104 ntBASIC-0.97□□□□□ -2.56
VPS53Q5VIR6 MIR23C-201ENST00000579846 100 ntBASIC-0.97□□□□□ -2.56
VPS53Q5VIR6 MIR1468-201ENST00000410600 86 ntBASIC-0.98□□□□□ -2.57
VPS53Q5VIR6 RPL35AP4-201ENST00000412007 102 ntBASIC-0.98□□□□□ -2.57
VPS53Q5VIR6 AL500527.2-201ENST00000454105 95 ntBASIC-0.98□□□□□ -2.57
VPS53Q5VIR6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.98□□□□□ -2.57
VPS53Q5VIR6 MT-TQ-201ENST00000387372 72 ntBASIC-0.99□□□□□ -2.57
VPS53Q5VIR6 Y_RNA.603-201ENST00000410571 108 ntBASIC-1□□□□□ -2.57
VPS53Q5VIR6 AC090616.4-201ENST00000448026 115 ntBASIC-1□□□□□ -2.57
VPS53Q5VIR6 RNU6-974P-201ENST00000384099 108 ntBASIC-1.01□□□□□ -2.57
VPS53Q5VIR6 RNU6-419P-201ENST00000517030 63 ntBASIC-1.01□□□□□ -2.57
VPS53Q5VIR6 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.03□□□□□ -2.57
VPS53Q5VIR6 MIR196A1-201ENST00000388006 70 ntBASIC-1.03□□□□□ -2.57
VPS53Q5VIR6 RNY1P9-201ENST00000532431 109 ntBASIC-1.03□□□□□ -2.57
VPS53Q5VIR6 SNORD45.2-201ENST00000363552 72 ntBASIC-1.04□□□□□ -2.58
VPS53Q5VIR6 SNORD113-4-201ENST00000364802 75 ntBASIC-1.04□□□□□ -2.58
VPS53Q5VIR6 AL451105.1-201ENST00000450005 189 ntBASIC-1.04□□□□□ -2.58
VPS53Q5VIR6 MIR548X-201ENST00000580069 75 ntBASIC-1.05□□□□□ -2.58
VPS53Q5VIR6 RNU6-164P-201ENST00000364604 103 ntBASIC-1.07□□□□□ -2.58
VPS53Q5VIR6 SNORD83B-201ENST00000386745 93 ntBASIC-1.07□□□□□ -2.58
VPS53Q5VIR6 uc_338.19-201ENST00000616808 99 ntBASIC-1.08□□□□□ -2.58
VPS53Q5VIR6 RNU6-576P-201ENST00000390854 102 ntBASIC-1.09□□□□□ -2.58
VPS53Q5VIR6 RNA5SP476-201ENST00000516613 103 ntBASIC-1.09□□□□□ -2.58
VPS53Q5VIR6 MIR4499-201ENST00000584834 69 ntBASIC-1.09□□□□□ -2.58
VPS53Q5VIR6 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.1□□□□□ -2.59
VPS53Q5VIR6 AC018880.2-201ENST00000414265 201 ntBASIC-1.12□□□□□ -2.59
VPS53Q5VIR6 RNU6-30P-201ENST00000384561 107 ntBASIC-1.13□□□□□ -2.59
VPS53Q5VIR6 HAR1A.1-201ENST00000459583 118 ntBASIC-1.14□□□□□ -2.59
VPS53Q5VIR6 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.14□□□□□ -2.59
VPS53Q5VIR6 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.15□□□□□ -2.59
VPS53Q5VIR6 RNU7-134P-201ENST00000458997 64 ntBASIC-1.15□□□□□ -2.59
VPS53Q5VIR6 RNA5SP67-201ENST00000516422 131 ntBASIC-1.15□□□□□ -2.59
VPS53Q5VIR6 MIR548AX-201ENST00000580117 73 ntBASIC-1.17□□□□□ -2.6
VPS53Q5VIR6 RNU6-530P-201ENST00000391180 107 ntBASIC-1.18□□□□□ -2.6
VPS53Q5VIR6 SCARNA17-201ENST00000516183 144 ntBASIC-1.18□□□□□ -2.6
VPS53Q5VIR6 RNU6-980P-201ENST00000516925 103 ntBASIC-1.18□□□□□ -2.6
VPS53Q5VIR6 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.18□□□□□ -2.6
VPS53Q5VIR6 RNU6-79P-201ENST00000362511 107 ntBASIC-1.19□□□□□ -2.6
VPS53Q5VIR6 RNU4-33P-201ENST00000364316 85 ntBASIC-1.19□□□□□ -2.6
VPS53Q5VIR6 RNU6-614P-201ENST00000384369 107 ntBASIC-1.19□□□□□ -2.6
VPS53Q5VIR6 RNY3P8-201ENST00000411366 126 ntBASIC-1.19□□□□□ -2.6
VPS53Q5VIR6 AC120024.2-201ENST00000576526 175 ntBASIC-1.19□□□□□ -2.6
VPS53Q5VIR6 U6.59-201ENST00000615686 107 ntBASIC-1.19□□□□□ -2.6
VPS53Q5VIR6 RNU6-361P-201ENST00000364454 107 ntBASIC-1.2□□□□□ -2.6
VPS53Q5VIR6 AC091912.2-201ENST00000624798 167 ntBASIC-1.23□□□□□ -2.61
VPS53Q5VIR6 SNORD60-201ENST00000383903 83 ntBASIC-1.25□□□□□ -2.61
VPS53Q5VIR6 MIR202-201ENST00000362219 110 ntBASIC-1.26□□□□□ -2.61
VPS53Q5VIR6 RNU6-563P-201ENST00000364872 108 ntBASIC-1.26□□□□□ -2.61
VPS53Q5VIR6 MIR6874-201ENST00000635894 71 ntBASIC-1.26□□□□□ -2.61
VPS53Q5VIR6 RNU6-400P-201ENST00000391173 106 ntBASIC-1.27□□□□□ -2.61
VPS53Q5VIR6 SNORA17.4-201ENST00000391287 132 ntBASIC-1.27□□□□□ -2.61
VPS53Q5VIR6 MTND4LP19-201ENST00000403051 166 ntBASIC-1.28□□□□□ -2.61
VPS53Q5VIR6 AC013734.1-201ENST00000619329 111 ntBASIC-1.28□□□□□ -2.61
VPS53Q5VIR6 MIR4426-201ENST00000640330 63 ntBASIC-1.28□□□□□ -2.61
VPS53Q5VIR6 MIR6738-201ENST00000619620 64 ntBASIC-1.29□□□□□ -2.62
VPS53Q5VIR6 MIR4324-201ENST00000584846 72 ntBASIC-1.3□□□□□ -2.62
VPS53Q5VIR6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.31□□□□□ -2.62
VPS53Q5VIR6 RNU6-936P-201ENST00000384005 107 ntBASIC-1.31□□□□□ -2.62
VPS53Q5VIR6 MIR548N-201ENST00000408742 75 ntBASIC-1.31□□□□□ -2.62
VPS53Q5VIR6 RNU6-808P-201ENST00000391233 108 ntBASIC-1.32□□□□□ -2.62
VPS53Q5VIR6 RNU6-176P-201ENST00000517196 105 ntBASIC-1.33□□□□□ -2.62
VPS53Q5VIR6 MIR378F-201ENST00000578143 78 ntBASIC-1.33□□□□□ -2.62
VPS53Q5VIR6 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.34□□□□□ -2.62
VPS53Q5VIR6 MIR4306-201ENST00000583390 91 ntBASIC-1.34□□□□□ -2.62
VPS53Q5VIR6 RNU6-742P-201ENST00000365289 107 ntBASIC-1.35□□□□□ -2.63
VPS53Q5VIR6 RNU6-10P-201ENST00000384036 107 ntBASIC-1.36□□□□□ -2.63
VPS53Q5VIR6 SNORD18C-201ENST00000362704 69 ntBASIC-1.37□□□□□ -2.63
VPS53Q5VIR6 RNU6-300P-201ENST00000459080 104 ntBASIC-1.38□□□□□ -2.63
VPS53Q5VIR6 U6.97-201ENST00000636904 101 ntBASIC-1.38□□□□□ -2.63
VPS53Q5VIR6 MIR6502-201ENST00000617296 76 ntBASIC-1.39□□□□□ -2.63
VPS53Q5VIR6 MIR548AL-201ENST00000578416 97 ntBASIC-1.4□□□□□ -2.63
VPS53Q5VIR6 RNU6-753P-201ENST00000363926 107 ntBASIC-1.41□□□□□ -2.64
VPS53Q5VIR6 MIR409-201ENST00000362237 79 ntBASIC-1.42□□□□□ -2.64
VPS53Q5VIR6 RNU6-838P-201ENST00000363399 108 ntBASIC-1.42□□□□□ -2.64
VPS53Q5VIR6 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms