Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 MIR125B1-201ENST00000385236 88 ntBASIC-1.86□□□□□ -2.71
LRIT3Q3SXY7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.86□□□□□ -2.71
LRIT3Q3SXY7 MIR7978-201ENST00000636158 59 ntBASIC-1.86□□□□□ -2.71
LRIT3Q3SXY7 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 SNORD116-24-201ENST00000384549 92 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 AC108019.1-201ENST00000512540 175 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 MIR3139-201ENST00000579145 76 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 AC005520.4-201ENST00000604337 90 ntBASIC-1.87□□□□□ -2.71
LRIT3Q3SXY7 SNORA27.2-201ENST00000363365 126 ntBASIC-1.88□□□□□ -2.71
LRIT3Q3SXY7 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.88□□□□□ -2.71
LRIT3Q3SXY7 RNU6-669P-201ENST00000365575 107 ntBASIC-1.88□□□□□ -2.71
LRIT3Q3SXY7 RNU6-995P-201ENST00000391244 107 ntBASIC-1.88□□□□□ -2.71
LRIT3Q3SXY7 RNU6-228P-201ENST00000362700 106 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 AL603908.1-201ENST00000406098 201 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 RNU6-172P-201ENST00000411000 93 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 RNU6-789P-201ENST00000517105 102 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 MIR548AM-201ENST00000584298 74 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 AC013734.1-201ENST00000619329 111 ntBASIC-1.89□□□□□ -2.71
LRIT3Q3SXY7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.9□□□□□ -2.71
LRIT3Q3SXY7 MIR579-201ENST00000385221 98 ntBASIC-1.9□□□□□ -2.71
LRIT3Q3SXY7 SNORD63.2-201ENST00000516303 64 ntBASIC-1.9□□□□□ -2.71
LRIT3Q3SXY7 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.91□□□□□ -2.72
LRIT3Q3SXY7 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.91□□□□□ -2.72
LRIT3Q3SXY7 MT-TM-201ENST00000387377 68 ntBASIC-1.91□□□□□ -2.72
LRIT3Q3SXY7 RNU6-523P-201ENST00000516304 54 ntBASIC-1.91□□□□□ -2.72
LRIT3Q3SXY7 MIR5588-201ENST00000581890 63 ntBASIC-1.91□□□□□ -2.72
LRIT3Q3SXY7 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.92□□□□□ -2.72
LRIT3Q3SXY7 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.92□□□□□ -2.72
LRIT3Q3SXY7 RNU6-979P-201ENST00000383896 107 ntBASIC-1.92□□□□□ -2.72
LRIT3Q3SXY7 MIR4712-201ENST00000583750 82 ntBASIC-1.93□□□□□ -2.72
LRIT3Q3SXY7 MIR664B-201ENST00000626756 61 ntBASIC-1.95□□□□□ -2.72
LRIT3Q3SXY7 SNORD115-31-201ENST00000365318 82 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 RNU6-974P-201ENST00000384099 108 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 RNY3P8-201ENST00000411366 126 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 RNU7-171P-201ENST00000459581 62 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 MIR4756-201ENST00000577874 78 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 MIR548AI-201ENST00000579940 88 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.96□□□□□ -2.72
LRIT3Q3SXY7 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.97□□□□□ -2.72
LRIT3Q3SXY7 RNU6-70P-201ENST00000516438 60 ntBASIC-1.97□□□□□ -2.72
LRIT3Q3SXY7 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.97□□□□□ -2.72
LRIT3Q3SXY7 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.98□□□□□ -2.73
LRIT3Q3SXY7 RNU6-44P-201ENST00000384045 107 ntBASIC-1.98□□□□□ -2.73
LRIT3Q3SXY7 RNU6-49P-201ENST00000384256 107 ntBASIC-1.98□□□□□ -2.73
LRIT3Q3SXY7 MIR154-201ENST00000385243 84 ntBASIC-1.98□□□□□ -2.73
LRIT3Q3SXY7 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.98□□□□□ -2.73
LRIT3Q3SXY7 MIR1245B-201ENST00000636115 69 ntBASIC-1.98□□□□□ -2.73
LRIT3Q3SXY7 RNU6-895P-201ENST00000384125 103 ntBASIC-1.99□□□□□ -2.73
LRIT3Q3SXY7 RNA5SP89-201ENST00000410300 108 ntBASIC-1.99□□□□□ -2.73
LRIT3Q3SXY7 RNU6-542P-201ENST00000516405 103 ntBASIC-1.99□□□□□ -2.73
LRIT3Q3SXY7 RNU7-160P-201ENST00000516660 62 ntBASIC-1.99□□□□□ -2.73
LRIT3Q3SXY7 RNU6-92P-201ENST00000605893 104 ntBASIC-1.99□□□□□ -2.73
LRIT3Q3SXY7 U6.97-201ENST00000636904 101 ntBASIC-2□□□□□ -2.73
LRIT3Q3SXY7 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.01□□□□□ -2.73
LRIT3Q3SXY7 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.01□□□□□ -2.73
LRIT3Q3SXY7 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 RNU4-88P-201ENST00000411220 86 ntBASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 RNU6-687P-201ENST00000516443 89 ntBASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 MIR3134-201ENST00000579433 74 ntBASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
LRIT3Q3SXY7 MIR548W-201ENST00000581970 74 ntBASIC-2.03□□□□□ -2.73
LRIT3Q3SXY7 SNORD60.1-201ENST00000362451 73 ntBASIC-2.04□□□□□ -2.74
LRIT3Q3SXY7 RNU6-242P-201ENST00000384359 107 ntBASIC-2.04□□□□□ -2.74
LRIT3Q3SXY7 RNY4P30-201ENST00000410216 95 ntBASIC-2.04□□□□□ -2.74
LRIT3Q3SXY7 SNORD18C-201ENST00000362704 69 ntBASIC-2.05□□□□□ -2.74
LRIT3Q3SXY7 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.05□□□□□ -2.74
LRIT3Q3SXY7 RNU6-520P-201ENST00000384717 104 ntBASIC-2.06□□□□□ -2.74
LRIT3Q3SXY7 MIR581-201ENST00000384895 96 ntBASIC-2.06□□□□□ -2.74
LRIT3Q3SXY7 snoU13.10-201ENST00000459301 103 ntBASIC-2.06□□□□□ -2.74
LRIT3Q3SXY7 MIR7110-201ENST00000612638 86 ntBASIC-2.06□□□□□ -2.74
LRIT3Q3SXY7 RNU6-828P-201ENST00000364876 107 ntBASIC-2.07□□□□□ -2.74
LRIT3Q3SXY7 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.07□□□□□ -2.74
LRIT3Q3SXY7 RNU6-406P-201ENST00000516470 107 ntBASIC-2.07□□□□□ -2.74
LRIT3Q3SXY7 RNU6-231P-201ENST00000517122 103 ntBASIC-2.07□□□□□ -2.74
LRIT3Q3SXY7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.07□□□□□ -2.74
LRIT3Q3SXY7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.08□□□□□ -2.74
LRIT3Q3SXY7 MIR548N-201ENST00000408742 75 ntBASIC-2.09□□□□□ -2.74
LRIT3Q3SXY7 RNU6-810P-201ENST00000364001 107 ntBASIC-2.1□□□□□ -2.75
LRIT3Q3SXY7 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.1□□□□□ -2.75
LRIT3Q3SXY7 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.1□□□□□ -2.75
LRIT3Q3SXY7 MIR4666B-201ENST00000578142 81 ntBASIC-2.1□□□□□ -2.75
LRIT3Q3SXY7 MIR202-201ENST00000362219 110 ntBASIC-2.11□□□□□ -2.75
LRIT3Q3SXY7 MIR494-201ENST00000349529 81 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 SNORD60-201ENST00000383903 83 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 MIR450A2-201ENST00000385022 100 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.12□□□□□ -2.75
LRIT3Q3SXY7 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.13□□□□□ -2.75
LRIT3Q3SXY7 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.13□□□□□ -2.75
LRIT3Q3SXY7 RNU6-411P-201ENST00000384451 107 ntBASIC-2.13□□□□□ -2.75
LRIT3Q3SXY7 RNU6-649P-201ENST00000384463 107 ntBASIC-2.13□□□□□ -2.75
LRIT3Q3SXY7 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms