Protein–RNA interactions for Protein: Q2UY09

COL28A1, Collagen alpha-1(XXVIII) chain, humanhuman

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1Q2UY09 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.78□□□□□ -2.53
COL28A1Q2UY09 MIR507-201ENST00000385234 94 ntBASIC-0.78□□□□□ -2.53
COL28A1Q2UY09 MIR5591-201ENST00000578248 65 ntBASIC-0.78□□□□□ -2.53
COL28A1Q2UY09 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.79□□□□□ -2.54
COL28A1Q2UY09 MIR6502-201ENST00000617296 76 ntBASIC-0.79□□□□□ -2.54
COL28A1Q2UY09 U2.18-201ENST00000622185 84 ntBASIC-0.79□□□□□ -2.54
COL28A1Q2UY09 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 RNU6-630P-201ENST00000391258 106 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 RPL35AP4-201ENST00000412007 102 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 RNU6-871P-201ENST00000516122 100 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 RNA5SP180-201ENST00000516181 101 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 MIR1246-201ENST00000636535 73 ntBASIC-0.8□□□□□ -2.54
COL28A1Q2UY09 SNORD1B-201ENST00000363091 84 ntBASIC-0.81□□□□□ -2.54
COL28A1Q2UY09 MIR548Q-201ENST00000408404 100 ntBASIC-0.81□□□□□ -2.54
COL28A1Q2UY09 MIR4490-201ENST00000582647 84 ntBASIC-0.81□□□□□ -2.54
COL28A1Q2UY09 RNU6-92P-201ENST00000605893 104 ntBASIC-0.81□□□□□ -2.54
COL28A1Q2UY09 RNU6-164P-201ENST00000364604 103 ntBASIC-0.82□□□□□ -2.54
COL28A1Q2UY09 SNORD30.1-201ENST00000391309 70 ntBASIC-0.82□□□□□ -2.54
COL28A1Q2UY09 MIR4441-201ENST00000582623 100 ntBASIC-0.82□□□□□ -2.54
COL28A1Q2UY09 SNORA25.4-201ENST00000363666 124 ntBASIC-0.83□□□□□ -2.54
COL28A1Q2UY09 RNU6-776P-201ENST00000364403 104 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 MIR548AA1-201ENST00000384971 97 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 RNA5SP86-201ENST00000390869 98 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 AC090616.4-201ENST00000448026 115 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 MIR4770-201ENST00000579149 58 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 MIR4662A-201ENST00000637499 67 ntBASIC-0.84□□□□□ -2.54
COL28A1Q2UY09 SNORD60.1-201ENST00000362451 73 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 RNY4P27-201ENST00000363341 96 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 RNU6-649P-201ENST00000384463 107 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 MIR487B-201ENST00000385021 84 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 MIR1285-2-201ENST00000408311 88 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 AC005520.4-201ENST00000604337 90 ntBASIC-0.85□□□□□ -2.55
COL28A1Q2UY09 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.86□□□□□ -2.55
COL28A1Q2UY09 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.86□□□□□ -2.55
COL28A1Q2UY09 RNU6-539P-201ENST00000516665 103 ntBASIC-0.86□□□□□ -2.55
COL28A1Q2UY09 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.86□□□□□ -2.55
COL28A1Q2UY09 U6.111-201ENST00000636093 83 ntBASIC-0.86□□□□□ -2.55
COL28A1Q2UY09 MIR520D-201ENST00000385002 87 ntBASIC-0.87□□□□□ -2.55
COL28A1Q2UY09 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.87□□□□□ -2.55
COL28A1Q2UY09 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.88□□□□□ -2.55
COL28A1Q2UY09 RNU6-172P-201ENST00000411000 93 ntBASIC-0.88□□□□□ -2.55
COL28A1Q2UY09 MIR3170-201ENST00000582699 77 ntBASIC-0.88□□□□□ -2.55
COL28A1Q2UY09 SNORA25.5-201ENST00000363782 126 ntBASIC-0.89□□□□□ -2.55
COL28A1Q2UY09 RNU6-608P-201ENST00000383927 104 ntBASIC-0.89□□□□□ -2.55
COL28A1Q2UY09 MIR548H1-201ENST00000408610 102 ntBASIC-0.89□□□□□ -2.55
COL28A1Q2UY09 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.89□□□□□ -2.55
COL28A1Q2UY09 SNORA72.7-201ENST00000516349 94 ntBASIC-0.9□□□□□ -2.55
COL28A1Q2UY09 RNU7-151P-201ENST00000516930 53 ntBASIC-0.9□□□□□ -2.55
COL28A1Q2UY09 MIR4511-201ENST00000582784 87 ntBASIC-0.9□□□□□ -2.55
COL28A1Q2UY09 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.91□□□□□ -2.56
COL28A1Q2UY09 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.91□□□□□ -2.56
COL28A1Q2UY09 RNU6-983P-201ENST00000516004 103 ntBASIC-0.91□□□□□ -2.56
COL28A1Q2UY09 AC103706.3-201ENST00000636297 85 ntBASIC-0.91□□□□□ -2.56
COL28A1Q2UY09 SNORD18.1-201ENST00000363807 70 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 RNU6-400P-201ENST00000391173 106 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 RNU6-995P-201ENST00000391244 107 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 AC018880.2-201ENST00000414265 201 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 RNU6-122P-201ENST00000516818 107 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 MIR7978-201ENST00000636158 59 ntBASIC-0.92□□□□□ -2.56
COL28A1Q2UY09 RNU6-79P-201ENST00000362511 107 ntBASIC-0.93□□□□□ -2.56
COL28A1Q2UY09 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.93□□□□□ -2.56
COL28A1Q2UY09 RNU6-800P-201ENST00000384473 103 ntBASIC-0.93□□□□□ -2.56
COL28A1Q2UY09 MIR579-201ENST00000385221 98 ntBASIC-0.93□□□□□ -2.56
COL28A1Q2UY09 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.94□□□□□ -2.56
COL28A1Q2UY09 RNU6-247P-201ENST00000362636 107 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 RNU6-563P-201ENST00000364872 108 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 MIR125B1-201ENST00000385236 88 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 AC108019.1-201ENST00000512540 175 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 RNU6-231P-201ENST00000517122 103 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 MIR7110-201ENST00000612638 86 ntBASIC-0.95□□□□□ -2.56
COL28A1Q2UY09 RNU6-258P-201ENST00000390884 101 ntBASIC-0.96□□□□□ -2.56
COL28A1Q2UY09 MIR4756-201ENST00000577874 78 ntBASIC-0.96□□□□□ -2.56
COL28A1Q2UY09 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.97□□□□□ -2.56
COL28A1Q2UY09 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.97□□□□□ -2.56
COL28A1Q2UY09 RNU7-160P-201ENST00000516660 62 ntBASIC-0.97□□□□□ -2.56
COL28A1Q2UY09 RNU6-940P-201ENST00000363433 104 ntBASIC-0.98□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.98□□□□□ -2.57
COL28A1Q2UY09 RNU6-669P-201ENST00000365575 107 ntBASIC-0.98□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.98□□□□□ -2.57
COL28A1Q2UY09 RNU6-695P-201ENST00000391157 104 ntBASIC-0.98□□□□□ -2.57
COL28A1Q2UY09 MIR23C-201ENST00000579846 100 ntBASIC-0.98□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.99□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.99□□□□□ -2.57
COL28A1Q2UY09 AC114801.3-201ENST00000510231 177 ntBASIC-0.99□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.99□□□□□ -2.57
COL28A1Q2UY09 MIR3123-201ENST00000583417 75 ntBASIC-0.99□□□□□ -2.57
COL28A1Q2UY09 RNU6-810P-201ENST00000364001 107 ntBASIC-1□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.225-201ENST00000364326 97 ntBASIC-1□□□□□ -2.57
COL28A1Q2UY09 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
COL28A1Q2UY09 AC120024.2-201ENST00000576526 175 ntBASIC-1□□□□□ -2.57
COL28A1Q2UY09 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.01□□□□□ -2.57
COL28A1Q2UY09 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.01□□□□□ -2.57
COL28A1Q2UY09 SNORD116.2-201ENST00000391251 93 ntBASIC-1.01□□□□□ -2.57
COL28A1Q2UY09 AC110620.1-201ENST00000416042 228 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms