Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL450471.1-201ENST00000447509 127 ntBASIC-2.13□□□□□ -2.75
CLDN6P56747 SNORD33.1-201ENST00000516213 88 ntBASIC-2.13□□□□□ -2.75
CLDN6P56747 MIR3914-2-201ENST00000637339 95 ntBASIC-2.13□□□□□ -2.75
CLDN6P56747 SNORD116-10-201ENST00000363791 102 ntBASIC-2.14□□□□□ -2.75
CLDN6P56747 MIR1236-201ENST00000408340 102 ntBASIC-2.14□□□□□ -2.75
CLDN6P56747 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.14□□□□□ -2.75
CLDN6P56747 RNU6-388P-201ENST00000517012 105 ntBASIC-2.14□□□□□ -2.75
CLDN6P56747 RNU6-389P-201ENST00000517048 105 ntBASIC-2.14□□□□□ -2.75
CLDN6P56747 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.15□□□□□ -2.75
CLDN6P56747 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.15□□□□□ -2.75
CLDN6P56747 MIR656-201ENST00000385224 78 ntBASIC-2.15□□□□□ -2.75
CLDN6P56747 AC139453.2-201ENST00000487255 133 ntBASIC-2.15□□□□□ -2.75
CLDN6P56747 RNU7-160P-201ENST00000516660 62 ntBASIC-2.16□□□□□ -2.76
CLDN6P56747 RNA5SP224-201ENST00000365069 126 ntBASIC-2.17□□□□□ -2.76
CLDN6P56747 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.17□□□□□ -2.76
CLDN6P56747 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.17□□□□□ -2.76
CLDN6P56747 AL353621.2-201ENST00000605340 133 ntBASIC-2.17□□□□□ -2.76
CLDN6P56747 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.18□□□□□ -2.76
CLDN6P56747 SNORD45C-201ENST00000383893 79 ntBASIC-2.18□□□□□ -2.76
CLDN6P56747 RNU6-257P-201ENST00000410238 98 ntBASIC-2.18□□□□□ -2.76
CLDN6P56747 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.18□□□□□ -2.76
CLDN6P56747 U6.95-201ENST00000636931 70 ntBASIC-2.18□□□□□ -2.76
CLDN6P56747 SNORD45.1-201ENST00000363181 77 ntBASIC-2.19□□□□□ -2.76
CLDN6P56747 RNU6-681P-201ENST00000364012 104 ntBASIC-2.19□□□□□ -2.76
CLDN6P56747 RNU6-463P-201ENST00000384340 107 ntBASIC-2.19□□□□□ -2.76
CLDN6P56747 RNU6-904P-201ENST00000516206 101 ntBASIC-2.19□□□□□ -2.76
CLDN6P56747 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.19□□□□□ -2.76
CLDN6P56747 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.2□□□□□ -2.76
CLDN6P56747 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.2□□□□□ -2.76
CLDN6P56747 RNU6-537P-201ENST00000517277 103 ntBASIC-2.2□□□□□ -2.76
CLDN6P56747 MIR3675-201ENST00000583661 73 ntBASIC-2.2□□□□□ -2.76
CLDN6P56747 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 RNA5SP215-201ENST00000363440 122 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 MIR545-201ENST00000385085 106 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 SNORD116.2-201ENST00000391251 93 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 RNU6-182P-201ENST00000516970 105 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 RNU6-176P-201ENST00000517196 105 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 AC062037.1-201ENST00000605302 128 ntBASIC-2.21□□□□□ -2.76
CLDN6P56747 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.22□□□□□ -2.76
CLDN6P56747 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.22□□□□□ -2.76
CLDN6P56747 MIR7110-201ENST00000612638 86 ntBASIC-2.22□□□□□ -2.76
CLDN6P56747 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.23□□□□□ -2.77
CLDN6P56747 AL451105.1-201ENST00000450005 189 ntBASIC-2.23□□□□□ -2.77
CLDN6P56747 SNORA8.1-201ENST00000384250 140 ntBASIC-2.24□□□□□ -2.77
CLDN6P56747 AP001318.4-201ENST00000616637 121 ntBASIC-2.24□□□□□ -2.77
CLDN6P56747 RNU6-822P-201ENST00000362707 106 ntBASIC-2.25□□□□□ -2.77
CLDN6P56747 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.25□□□□□ -2.77
CLDN6P56747 RNU6-231P-201ENST00000517122 103 ntBASIC-2.25□□□□□ -2.77
CLDN6P56747 SNORA40.16-201ENST00000517238 121 ntBASIC-2.25□□□□□ -2.77
CLDN6P56747 SNORD113.1-201ENST00000363280 73 ntBASIC-2.26□□□□□ -2.77
CLDN6P56747 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.26□□□□□ -2.77
CLDN6P56747 SNORD115.2-201ENST00000391126 59 ntBASIC-2.26□□□□□ -2.77
CLDN6P56747 RNU7-61P-201ENST00000515897 61 ntBASIC-2.26□□□□□ -2.77
CLDN6P56747 RNU6-886P-201ENST00000384319 105 ntBASIC-2.27□□□□□ -2.77
CLDN6P56747 SNORD45A-201ENST00000384512 84 ntBASIC-2.27□□□□□ -2.77
CLDN6P56747 RNU6-422P-201ENST00000384632 107 ntBASIC-2.27□□□□□ -2.77
CLDN6P56747 RNU7-200P-201ENST00000516105 62 ntBASIC-2.27□□□□□ -2.77
CLDN6P56747 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.27□□□□□ -2.77
CLDN6P56747 SNORA40B-201ENST00000385573 128 ntBASIC-2.28□□□□□ -2.77
CLDN6P56747 MTND4LP1-201ENST00000446263 157 ntBASIC-2.28□□□□□ -2.77
CLDN6P56747 RNU6-836P-201ENST00000362920 107 ntBASIC-2.29□□□□□ -2.78
CLDN6P56747 MIR363-201ENST00000384840 75 ntBASIC-2.29□□□□□ -2.78
CLDN6P56747 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
CLDN6P56747 MIR664A-201ENST00000626086 82 ntBASIC-2.3□□□□□ -2.78
CLDN6P56747 SNORD60.1-201ENST00000362451 73 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 RNA5SP173-201ENST00000364857 136 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 SNORD116-21-201ENST00000384507 92 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 MT-TG-201ENST00000387429 68 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.31□□□□□ -2.78
CLDN6P56747 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 RNU6-162P-201ENST00000516228 103 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 RNU6-659P-201ENST00000516454 104 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 RNU6-789P-201ENST00000517105 102 ntBASIC-2.31□□□□□ -2.78
CLDN6P56747 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.32□□□□□ -2.78
CLDN6P56747 AC074348.1-201ENST00000426503 132 ntBASIC-2.32□□□□□ -2.78
CLDN6P56747 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.33□□□□□ -2.78
CLDN6P56747 SNORD45.2-201ENST00000363552 72 ntBASIC-2.33□□□□□ -2.78
CLDN6P56747 SNORD116-24-201ENST00000384549 92 ntBASIC-2.33□□□□□ -2.78
CLDN6P56747 MIR590-201ENST00000385008 97 ntBASIC-2.33□□□□□ -2.78
CLDN6P56747 RNU6-129P-201ENST00000391022 107 ntBASIC-2.33□□□□□ -2.78
CLDN6P56747 MIR4484-201ENST00000582855 83 ntBASIC-2.33□□□□□ -2.78
CLDN6P56747 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.34□□□□□ -2.78
CLDN6P56747 RNU4-85P-201ENST00000364675 123 ntBASIC-2.34□□□□□ -2.78
CLDN6P56747 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.34□□□□□ -2.78
CLDN6P56747 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.34□□□□□ -2.78
CLDN6P56747 MIR1302-5-201ENST00000408164 150 ntBASIC-2.34□□□□□ -2.78
CLDN6P56747 U7.3-201ENST00000616123 62 ntBASIC-2.34□□□□□ -2.78
CLDN6P56747 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.35□□□□□ -2.79
CLDN6P56747 MIR519C-201ENST00000385053 87 ntBASIC-2.35□□□□□ -2.79
CLDN6P56747 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 RNU6-303P-201ENST00000517091 106 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 MIR548AI-201ENST00000579940 88 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 RNU6-92P-201ENST00000605893 104 ntBASIC-2.36□□□□□ -2.79
CLDN6P56747 RNU6-624P-201ENST00000363411 107 ntBASIC-2.37□□□□□ -2.79
CLDN6P56747 RNU6-419P-201ENST00000517030 63 ntBASIC-2.37□□□□□ -2.79
CLDN6P56747 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.38□□□□□ -2.79
CLDN6P56747 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.39□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms