Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MIR145-201ENST00000384967 88 ntBASIC0.65□□□□□ -2.31
EMP3P54852 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
EMP3P54852 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
EMP3P54852 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
EMP3P54852 SNORA13-201ENST00000458790 133 ntBASIC0.64□□□□□ -2.31
EMP3P54852 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
EMP3P54852 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
EMP3P54852 MIR598-201ENST00000384868 97 ntBASIC0.63□□□□□ -2.31
EMP3P54852 AL500527.2-201ENST00000454105 95 ntBASIC0.63□□□□□ -2.31
EMP3P54852 AC018880.2-201ENST00000414265 201 ntBASIC0.62□□□□□ -2.31
EMP3P54852 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
EMP3P54852 PVT1_3.1-201ENST00000620853 95 ntBASIC0.59□□□□□ -2.31
EMP3P54852 RNU6-46P-201ENST00000383860 107 ntBASIC0.58□□□□□ -2.32
EMP3P54852 MIR4315-1-201ENST00000636800 73 ntBASIC0.58□□□□□ -2.32
EMP3P54852 MIR4315-2-201ENST00000640925 73 ntBASIC0.58□□□□□ -2.32
EMP3P54852 RNU6-1043P-201ENST00000410355 99 ntBASIC0.57□□□□□ -2.32
EMP3P54852 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
EMP3P54852 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.57□□□□□ -2.32
EMP3P54852 RNU6-1327P-201ENST00000365302 105 ntBASIC0.55□□□□□ -2.32
EMP3P54852 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
EMP3P54852 SNORD19B.1-201ENST00000630615 80 ntBASIC0.55□□□□□ -2.32
EMP3P54852 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
EMP3P54852 Y_RNA.349-201ENST00000365406 102 ntBASIC0.54□□□□□ -2.32
EMP3P54852 MIR204-201ENST00000385200 110 ntBASIC0.54□□□□□ -2.32
EMP3P54852 Z95118.1-201ENST00000421372 247 ntBASIC0.54□□□□□ -2.32
EMP3P54852 RNA5SP480-201ENST00000516840 109 ntBASIC0.54□□□□□ -2.32
EMP3P54852 MIR6513-201ENST00000621188 64 ntBASIC0.54□□□□□ -2.32
EMP3P54852 MIR548H1-201ENST00000408610 102 ntBASIC0.53□□□□□ -2.32
EMP3P54852 RNU6-854P-201ENST00000364036 107 ntBASIC0.52□□□□□ -2.33
EMP3P54852 Y_RNA.59-201ENST00000362828 102 ntBASIC0.51□□□□□ -2.33
EMP3P54852 SNORD114-5-201ENST00000362928 70 ntBASIC0.51□□□□□ -2.33
EMP3P54852 RNA5SP214-201ENST00000363378 118 ntBASIC0.5□□□□□ -2.33
EMP3P54852 RN7SL793P-201ENST00000583259 296 ntBASIC0.49□□□□□ -2.33
EMP3P54852 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
EMP3P54852 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
EMP3P54852 SNORD113-3-201ENST00000364830 72 ntBASIC0.47□□□□□ -2.33
EMP3P54852 MIR6818-201ENST00000621576 65 ntBASIC0.47□□□□□ -2.33
EMP3P54852 Y_RNA.540-201ENST00000384638 111 ntBASIC0.46□□□□□ -2.34
EMP3P54852 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
EMP3P54852 SNORD114-26-201ENST00000363543 72 ntBASIC0.45□□□□□ -2.34
EMP3P54852 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
EMP3P54852 MIR4263-201ENST00000584745 83 ntBASIC0.45□□□□□ -2.34
EMP3P54852 SNORD114-23-201ENST00000363536 72 ntBASIC0.44□□□□□ -2.34
EMP3P54852 SNORD114-9-201ENST00000364370 72 ntBASIC0.44□□□□□ -2.34
EMP3P54852 RNU6-164P-201ENST00000364604 103 ntBASIC0.43□□□□□ -2.34
EMP3P54852 RNU6-422P-201ENST00000384632 107 ntBASIC0.43□□□□□ -2.34
EMP3P54852 RNU6-1034P-201ENST00000365335 101 ntBASIC0.42□□□□□ -2.34
EMP3P54852 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
EMP3P54852 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
EMP3P54852 MIR6779-201ENST00000617283 64 ntBASIC0.42□□□□□ -2.34
EMP3P54852 SNORD114-11-201ENST00000363738 75 ntBASIC0.41□□□□□ -2.34
EMP3P54852 AC104692.1-201ENST00000472406 90 ntBASIC0.41□□□□□ -2.34
EMP3P54852 MIR193B-201ENST00000384907 83 ntBASIC0.4□□□□□ -2.35
EMP3P54852 MIR147A-201ENST00000385079 72 ntBASIC0.4□□□□□ -2.35
EMP3P54852 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.39□□□□□ -2.35
EMP3P54852 RNU6-431P-201ENST00000383874 107 ntBASIC0.38□□□□□ -2.35
EMP3P54852 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
EMP3P54852 AC010487.4-201ENST00000637027 61 ntBASIC0.36□□□□□ -2.35
EMP3P54852 Y_RNA.63-201ENST00000362841 102 ntBASIC0.35□□□□□ -2.35
EMP3P54852 Y_RNA.449-201ENST00000384187 102 ntBASIC0.35□□□□□ -2.35
EMP3P54852 snoU13.10-201ENST00000459301 103 ntBASIC0.35□□□□□ -2.35
EMP3P54852 MIR1273G-201ENST00000577677 100 ntBASIC0.35□□□□□ -2.35
EMP3P54852 MIR548W-201ENST00000581970 74 ntBASIC0.34□□□□□ -2.36
EMP3P54852 MIR4788-201ENST00000639104 80 ntBASIC0.33□□□□□ -2.36
EMP3P54852 SNORD114-12-201ENST00000365400 75 ntBASIC0.32□□□□□ -2.36
EMP3P54852 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.32□□□□□ -2.36
EMP3P54852 MIR3666-201ENST00000607845 111 ntBASIC0.32□□□□□ -2.36
EMP3P54852 Y_RNA.484-201ENST00000384389 103 ntBASIC0.31□□□□□ -2.36
EMP3P54852 SNORD64-201ENST00000386683 67 ntBASIC0.31□□□□□ -2.36
EMP3P54852 RNU7-134P-201ENST00000458997 64 ntBASIC0.31□□□□□ -2.36
EMP3P54852 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
EMP3P54852 RNU6-627P-201ENST00000364032 102 ntBASIC0.28□□□□□ -2.36
EMP3P54852 AC021146.6-201ENST00000514659 117 ntBASIC0.28□□□□□ -2.36
EMP3P54852 SNORA18.1-201ENST00000363418 128 ntBASIC0.27□□□□□ -2.37
EMP3P54852 RNU6-983P-201ENST00000516004 103 ntBASIC0.27□□□□□ -2.37
EMP3P54852 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
EMP3P54852 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
EMP3P54852 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
EMP3P54852 MIR4290-201ENST00000583807 95 ntBASIC0.26□□□□□ -2.37
EMP3P54852 MIR6874-201ENST00000635894 71 ntBASIC0.26□□□□□ -2.37
EMP3P54852 MIR3123-201ENST00000583417 75 ntBASIC0.25□□□□□ -2.37
EMP3P54852 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
EMP3P54852 RNU6-400P-201ENST00000391173 106 ntBASIC0.24□□□□□ -2.37
EMP3P54852 RNA5SP330-201ENST00000517096 96 ntBASIC0.24□□□□□ -2.37
EMP3P54852 snoU83B.1-201ENST00000517136 88 ntBASIC0.24□□□□□ -2.37
EMP3P54852 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.24□□□□□ -2.37
EMP3P54852 RNA5SP300-201ENST00000391197 107 ntBASIC0.23□□□□□ -2.37
EMP3P54852 Y_RNA.115-201ENST00000363272 98 ntBASIC0.22□□□□□ -2.37
EMP3P54852 AC091912.2-201ENST00000624798 167 ntBASIC0.22□□□□□ -2.37
EMP3P54852 MIR330-201ENST00000362196 94 ntBASIC0.21□□□□□ -2.38
EMP3P54852 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
EMP3P54852 MIR382-201ENST00000637119 76 ntBASIC0.21□□□□□ -2.38
EMP3P54852 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
EMP3P54852 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
EMP3P54852 RNU6-892P-201ENST00000410335 99 ntBASIC0.16□□□□□ -2.38
EMP3P54852 SNORD4A-201ENST00000459174 72 ntBASIC0.16□□□□□ -2.38
EMP3P54852 MIRLET7A2-201ENST00000362105 72 ntBASIC0.15□□□□□ -2.39
EMP3P54852 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
EMP3P54852 RNA5SP457-201ENST00000363657 124 ntBASIC0.13□□□□□ -2.39
EMP3P54852 MIR124-1-201ENST00000385275 85 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms