Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MIR548AX-201ENST00000580117 73 ntBASIC-0.74□□□□□ -2.53
CLCN3P51790 RNU6-608P-201ENST00000383927 104 ntBASIC-0.75□□□□□ -2.53
CLCN3P51790 RNU6-520P-201ENST00000384717 104 ntBASIC-0.75□□□□□ -2.53
CLCN3P51790 MT-TQ-201ENST00000387372 72 ntBASIC-0.75□□□□□ -2.53
CLCN3P51790 RNU7-119P-201ENST00000459279 63 ntBASIC-0.75□□□□□ -2.53
CLCN3P51790 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.75□□□□□ -2.53
CLCN3P51790 MIR507-201ENST00000385234 94 ntBASIC-0.76□□□□□ -2.53
CLCN3P51790 RNU6-810P-201ENST00000364001 107 ntBASIC-0.77□□□□□ -2.53
CLCN3P51790 SNORA40B-201ENST00000385573 128 ntBASIC-0.77□□□□□ -2.53
CLCN3P51790 AC125388.1-201ENST00000459631 156 ntBASIC-0.77□□□□□ -2.53
CLCN3P51790 MIR4490-201ENST00000582647 84 ntBASIC-0.77□□□□□ -2.53
CLCN3P51790 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.78□□□□□ -2.53
CLCN3P51790 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
CLCN3P51790 RNU6-258P-201ENST00000390884 101 ntBASIC-0.78□□□□□ -2.53
CLCN3P51790 RNU6-995P-201ENST00000391244 107 ntBASIC-0.78□□□□□ -2.53
CLCN3P51790 RNU7-134P-201ENST00000458997 64 ntBASIC-0.78□□□□□ -2.53
CLCN3P51790 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.78□□□□□ -2.53
CLCN3P51790 MIR409-201ENST00000362237 79 ntBASIC-0.79□□□□□ -2.54
CLCN3P51790 RNU6-446P-201ENST00000362827 106 ntBASIC-0.79□□□□□ -2.54
CLCN3P51790 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.79□□□□□ -2.54
CLCN3P51790 SNORD116.2-201ENST00000391251 93 ntBASIC-0.79□□□□□ -2.54
CLCN3P51790 MIR6818-201ENST00000621576 65 ntBASIC-0.79□□□□□ -2.54
CLCN3P51790 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.8□□□□□ -2.54
CLCN3P51790 RNU6-974P-201ENST00000384099 108 ntBASIC-0.81□□□□□ -2.54
CLCN3P51790 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.81□□□□□ -2.54
CLCN3P51790 RNY1P9-201ENST00000532431 109 ntBASIC-0.81□□□□□ -2.54
CLCN3P51790 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.81□□□□□ -2.54
CLCN3P51790 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
CLCN3P51790 RNU6-788P-201ENST00000390967 104 ntBASIC-0.83□□□□□ -2.54
CLCN3P51790 AC090616.4-201ENST00000448026 115 ntBASIC-0.83□□□□□ -2.54
CLCN3P51790 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.83□□□□□ -2.54
CLCN3P51790 snoU83B.1-201ENST00000517136 88 ntBASIC-0.83□□□□□ -2.54
CLCN3P51790 MIR4499-201ENST00000584834 69 ntBASIC-0.83□□□□□ -2.54
CLCN3P51790 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.84□□□□□ -2.54
CLCN3P51790 RNU6-828P-201ENST00000364876 107 ntBASIC-0.85□□□□□ -2.55
CLCN3P51790 RNA5SP266-201ENST00000410273 108 ntBASIC-0.85□□□□□ -2.55
CLCN3P51790 SNORD63.2-201ENST00000516303 64 ntBASIC-0.86□□□□□ -2.55
CLCN3P51790 uc_338.19-201ENST00000616808 99 ntBASIC-0.86□□□□□ -2.55
CLCN3P51790 RNU6-247P-201ENST00000362636 107 ntBASIC-0.87□□□□□ -2.55
CLCN3P51790 SNORA27.2-201ENST00000363365 126 ntBASIC-0.87□□□□□ -2.55
CLCN3P51790 RNU6-829P-201ENST00000363700 112 ntBASIC-0.87□□□□□ -2.55
CLCN3P51790 RNA5SP331-201ENST00000364986 107 ntBASIC-0.88□□□□□ -2.55
CLCN3P51790 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.88□□□□□ -2.55
CLCN3P51790 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.89□□□□□ -2.55
CLCN3P51790 MIR633-201ENST00000384821 98 ntBASIC-0.89□□□□□ -2.55
CLCN3P51790 SNORD83B-201ENST00000386745 93 ntBASIC-0.89□□□□□ -2.55
CLCN3P51790 AC079150.2-201ENST00000443733 78 ntBASIC-0.89□□□□□ -2.55
CLCN3P51790 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.89□□□□□ -2.55
CLCN3P51790 SNORD113-4-201ENST00000364802 75 ntBASIC-0.9□□□□□ -2.55
CLCN3P51790 MIR1468-201ENST00000410600 86 ntBASIC-0.9□□□□□ -2.55
CLCN3P51790 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.91□□□□□ -2.56
CLCN3P51790 RNU6-419P-201ENST00000517030 63 ntBASIC-0.91□□□□□ -2.56
CLCN3P51790 MIR23C-201ENST00000579846 100 ntBASIC-0.91□□□□□ -2.56
CLCN3P51790 RNU6-164P-201ENST00000364604 103 ntBASIC-0.92□□□□□ -2.56
CLCN3P51790 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.92□□□□□ -2.56
CLCN3P51790 SCARNA17-201ENST00000516183 144 ntBASIC-0.93□□□□□ -2.56
CLCN3P51790 RNU6-499P-201ENST00000365615 107 ntBASIC-0.94□□□□□ -2.56
CLCN3P51790 AL451105.1-201ENST00000450005 189 ntBASIC-0.94□□□□□ -2.56
CLCN3P51790 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.95□□□□□ -2.56
CLCN3P51790 MIR6874-201ENST00000635894 71 ntBASIC-0.95□□□□□ -2.56
CLCN3P51790 MIR548X-201ENST00000580069 75 ntBASIC-0.96□□□□□ -2.56
CLCN3P51790 AC091912.2-201ENST00000624798 167 ntBASIC-0.96□□□□□ -2.56
CLCN3P51790 RNU6-79P-201ENST00000362511 107 ntBASIC-0.97□□□□□ -2.56
CLCN3P51790 MIR587-201ENST00000384845 96 ntBASIC-0.97□□□□□ -2.56
CLCN3P51790 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.97□□□□□ -2.56
CLCN3P51790 MIR8485-201ENST00000401372 91 ntBASIC-0.97□□□□□ -2.56
CLCN3P51790 SNX3P1X-201ENST00000414887 175 ntBASIC-0.97□□□□□ -2.56
CLCN3P51790 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.98□□□□□ -2.57
CLCN3P51790 RNU6-563P-201ENST00000364872 108 ntBASIC-0.98□□□□□ -2.57
CLCN3P51790 RNU6-576P-201ENST00000390854 102 ntBASIC-0.99□□□□□ -2.57
CLCN3P51790 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.99□□□□□ -2.57
CLCN3P51790 RNY3P8-201ENST00000411366 126 ntBASIC-1□□□□□ -2.57
CLCN3P51790 MIR6738-201ENST00000619620 64 ntBASIC-1□□□□□ -2.57
CLCN3P51790 AC018880.2-201ENST00000414265 201 ntBASIC-1.02□□□□□ -2.57
CLCN3P51790 RNU6-980P-201ENST00000516925 103 ntBASIC-1.02□□□□□ -2.57
CLCN3P51790 AC120024.2-201ENST00000576526 175 ntBASIC-1.02□□□□□ -2.57
CLCN3P51790 MIR378F-201ENST00000578143 78 ntBASIC-1.02□□□□□ -2.57
CLCN3P51790 AC013734.1-201ENST00000619329 111 ntBASIC-1.02□□□□□ -2.57
CLCN3P51790 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.03□□□□□ -2.57
CLCN3P51790 RNU6-10P-201ENST00000384036 107 ntBASIC-1.03□□□□□ -2.57
CLCN3P51790 SNORD45.2-201ENST00000363552 72 ntBASIC-1.05□□□□□ -2.58
CLCN3P51790 RNU6-361P-201ENST00000364454 107 ntBASIC-1.05□□□□□ -2.58
CLCN3P51790 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.05□□□□□ -2.58
CLCN3P51790 MIR4324-201ENST00000584846 72 ntBASIC-1.07□□□□□ -2.58
CLCN3P51790 RNU6-530P-201ENST00000391180 107 ntBASIC-1.09□□□□□ -2.58
CLCN3P51790 MIR4306-201ENST00000583390 91 ntBASIC-1.09□□□□□ -2.58
CLCN3P51790 MIR4320-201ENST00000636981 65 ntBASIC-1.09□□□□□ -2.58
CLCN3P51790 RNU6-400P-201ENST00000391173 106 ntBASIC-1.1□□□□□ -2.59
CLCN3P51790 MIR202-201ENST00000362219 110 ntBASIC-1.11□□□□□ -2.59
CLCN3P51790 RNU4-33P-201ENST00000364316 85 ntBASIC-1.11□□□□□ -2.59
CLCN3P51790 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.11□□□□□ -2.59
CLCN3P51790 MIR548N-201ENST00000408742 75 ntBASIC-1.11□□□□□ -2.59
CLCN3P51790 MIR6502-201ENST00000617296 76 ntBASIC-1.11□□□□□ -2.59
CLCN3P51790 U6.97-201ENST00000636904 101 ntBASIC-1.12□□□□□ -2.59
CLCN3P51790 MIR581-201ENST00000384895 96 ntBASIC-1.14□□□□□ -2.59
CLCN3P51790 SNORA17.4-201ENST00000391287 132 ntBASIC-1.14□□□□□ -2.59
CLCN3P51790 RNU6-742P-201ENST00000365289 107 ntBASIC-1.15□□□□□ -2.59
CLCN3P51790 SNORD60-201ENST00000383903 83 ntBASIC-1.16□□□□□ -2.6
CLCN3P51790 MIR4426-201ENST00000640330 63 ntBASIC-1.16□□□□□ -2.6
CLCN3P51790 MIR601-201ENST00000385256 79 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 238.8 ms