Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR548H1-201ENST00000408610 102 ntBASIC-1.5□□□□□ -2.65
SCN4AP35499 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.51□□□□□ -2.65
SCN4AP35499 SNORD60.1-201ENST00000362451 73 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 RNU6-153P-201ENST00000364422 104 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 RNU6-787P-201ENST00000384032 107 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 RNU6-663P-201ENST00000391105 106 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 MIR5582-201ENST00000579697 68 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 MIR494-201ENST00000349529 81 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 SNORD115-31-201ENST00000365318 82 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 MIR4712-201ENST00000583750 82 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
SCN4AP35499 RNU6-995P-201ENST00000391244 107 ntBASIC-1.53□□□□□ -2.65
SCN4AP35499 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 MIR3134-201ENST00000579433 74 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 RNY4P27-201ENST00000363341 96 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 RNU6-226P-201ENST00000363778 107 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 AC013734.1-201ENST00000619329 111 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 RNU6-841P-201ENST00000383872 107 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-974P-201ENST00000384099 108 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 MIR579-201ENST00000385221 98 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-563P-201ENST00000364872 108 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-687P-201ENST00000516443 89 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-895P-201ENST00000384125 103 ntBASIC-1.57□□□□□ -2.66
SCN4AP35499 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.57□□□□□ -2.66
SCN4AP35499 RNU6-523P-201ENST00000516304 54 ntBASIC-1.58□□□□□ -2.66
SCN4AP35499 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.58□□□□□ -2.66
SCN4AP35499 RNU6-411P-201ENST00000384451 107 ntBASIC-1.59□□□□□ -2.66
SCN4AP35499 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.59□□□□□ -2.66
SCN4AP35499 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.59□□□□□ -2.66
SCN4AP35499 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 SNORD45.2-201ENST00000363552 72 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 RNU6-172P-201ENST00000411000 93 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 MIR548AM-201ENST00000584298 74 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 U2.22-201ENST00000636441 106 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 RNU6-228P-201ENST00000362700 106 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 SNORD18C-201ENST00000362704 69 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 U6.97-201ENST00000636904 101 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 SNORD63.2-201ENST00000516303 64 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 MIR379-201ENST00000362218 67 ntBASIC-1.62□□□□□ -2.67
SCN4AP35499 RNU6-634P-201ENST00000459134 106 ntBASIC-1.62□□□□□ -2.67
SCN4AP35499 MIR3938-201ENST00000582157 103 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 MIR3123-201ENST00000583417 75 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNU6-810P-201ENST00000364001 107 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNU6-361P-201ENST00000364454 107 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNA5SP86-201ENST00000390869 98 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNU7-160P-201ENST00000516660 62 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.64□□□□□ -2.67
SCN4AP35499 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.64□□□□□ -2.67
SCN4AP35499 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.65□□□□□ -2.67
SCN4AP35499 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 RNU6-242P-201ENST00000384359 107 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 RNU6-649P-201ENST00000384463 107 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 RNU6-258P-201ENST00000390884 101 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 SNORD116.2-201ENST00000391251 93 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 MIR548W-201ENST00000581970 74 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 MIR125B1-201ENST00000385236 88 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 SNORA40B-201ENST00000385573 128 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 MIR7110-201ENST00000612638 86 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 MIR548N-201ENST00000408742 75 ntBASIC-1.67□□□□□ -2.68
SCN4AP35499 AC062037.1-201ENST00000605302 128 ntBASIC-1.67□□□□□ -2.68
SCN4AP35499 SNORA25.4-201ENST00000363666 124 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 RNU6-279P-201ENST00000391297 101 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 MIR4511-201ENST00000582784 87 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 MIR3202-2-201ENST00000635980 79 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 snoU13.10-201ENST00000459301 103 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 AC108019.1-201ENST00000512540 175 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 RNU6-119P-201ENST00000364882 107 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 RNU6-540P-201ENST00000384622 101 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 MIR487B-201ENST00000385021 84 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 RNU6-520P-201ENST00000384717 104 ntBASIC-1.7□□□□□ -2.68
SCN4AP35499 RNU7-119P-201ENST00000459279 63 ntBASIC-1.7□□□□□ -2.68
SCN4AP35499 MIR664B-201ENST00000626756 61 ntBASIC-1.7□□□□□ -2.68
SCN4AP35499 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
SCN4AP35499 SNORD18.1-201ENST00000363807 70 ntBASIC-1.71□□□□□ -2.68
SCN4AP35499 RNU6-983P-201ENST00000516004 103 ntBASIC-1.71□□□□□ -2.68
SCN4AP35499 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.71□□□□□ -2.68
SCN4AP35499 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.72□□□□□ -2.68
SCN4AP35499 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.72□□□□□ -2.68
SCN4AP35499 MIR4679-1-201ENST00000637619 75 ntBASIC-1.72□□□□□ -2.68
SCN4AP35499 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 RNU6-573P-201ENST00000383938 106 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 SNORA26.2-201ENST00000390922 122 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 SNORD30.1-201ENST00000391309 70 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 RNU6-857P-201ENST00000515893 110 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 MIR4756-201ENST00000577874 78 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.74□□□□□ -2.69
SCN4AP35499 SNORA17.4-201ENST00000391287 132 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 262.8 ms