Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU6-834P-201ENST00000362367 110 ntBASIC-3.25□□□□□ -2.93
RPA3P35244 RNU6-895P-201ENST00000384125 103 ntBASIC-3.25□□□□□ -2.93
RPA3P35244 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.25□□□□□ -2.93
RPA3P35244 MIR4748-201ENST00000578076 82 ntBASIC-3.25□□□□□ -2.93
RPA3P35244 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.26□□□□□ -2.93
RPA3P35244 MIR488-201ENST00000365739 83 ntBASIC-3.27□□□□□ -2.93
RPA3P35244 RNU7-160P-201ENST00000516660 62 ntBASIC-3.27□□□□□ -2.93
RPA3P35244 RNU6-844P-201ENST00000517175 102 ntBASIC-3.27□□□□□ -2.93
RPA3P35244 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.28□□□□□ -2.93
RPA3P35244 SNORD60-201ENST00000383903 83 ntBASIC-3.28□□□□□ -2.93
RPA3P35244 MIR154-201ENST00000385243 84 ntBASIC-3.28□□□□□ -2.93
RPA3P35244 AC090425.1-201ENST00000610007 140 ntBASIC-3.28□□□□□ -2.93
RPA3P35244 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.29□□□□□ -2.94
RPA3P35244 RNU6-649P-201ENST00000384463 107 ntBASIC-3.29□□□□□ -2.94
RPA3P35244 MIR581-201ENST00000384895 96 ntBASIC-3.29□□□□□ -2.94
RPA3P35244 MIR202-201ENST00000362219 110 ntBASIC-3.3□□□□□ -2.94
RPA3P35244 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.3□□□□□ -2.94
RPA3P35244 RNY1P1-201ENST00000364372 112 ntBASIC-3.31□□□□□ -2.94
RPA3P35244 RNU6-828P-201ENST00000364876 107 ntBASIC-3.31□□□□□ -2.94
RPA3P35244 RNU6-70P-201ENST00000516438 60 ntBASIC-3.31□□□□□ -2.94
RPA3P35244 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.31□□□□□ -2.94
RPA3P35244 RNU6-92P-201ENST00000605893 104 ntBASIC-3.31□□□□□ -2.94
RPA3P35244 AC099654.10-201ENST00000640395 161 ntBASIC-3.32□□□□□ -2.94
RPA3P35244 AC097484.2-201ENST00000509147 251 ntBASIC-3.33□□□□□ -2.94
RPA3P35244 MIR7110-201ENST00000612638 86 ntBASIC-3.33□□□□□ -2.94
RPA3P35244 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.34□□□□□ -2.94
RPA3P35244 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.34□□□□□ -2.94
RPA3P35244 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.34□□□□□ -2.94
RPA3P35244 RNU6-542P-201ENST00000516405 103 ntBASIC-3.34□□□□□ -2.94
RPA3P35244 FTX_4.1-201ENST00000616291 147 ntBASIC-3.34□□□□□ -2.94
RPA3P35244 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.35□□□□□ -2.95
RPA3P35244 MIR548N-201ENST00000408742 75 ntBASIC-3.35□□□□□ -2.95
RPA3P35244 MIR548AI-201ENST00000579940 88 ntBASIC-3.35□□□□□ -2.95
RPA3P35244 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.36□□□□□ -2.95
RPA3P35244 RNU6-810P-201ENST00000364001 107 ntBASIC-3.36□□□□□ -2.95
RPA3P35244 RNU6-81P-201ENST00000365608 104 ntBASIC-3.36□□□□□ -2.95
RPA3P35244 RNU6-640P-201ENST00000363693 105 ntBASIC-3.37□□□□□ -2.95
RPA3P35244 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.37□□□□□ -2.95
RPA3P35244 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.38□□□□□ -2.95
RPA3P35244 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.38□□□□□ -2.95
RPA3P35244 SNORA17.4-201ENST00000391287 132 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.39□□□□□ -2.95
RPA3P35244 SNORD60.1-201ENST00000362451 73 ntBASIC-3.4□□□□□ -2.95
RPA3P35244 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.4□□□□□ -2.95
RPA3P35244 IGLL4P-201ENST00000614590 133 ntBASIC-3.4□□□□□ -2.95
RPA3P35244 RNA5SP93-201ENST00000362525 114 ntBASIC-3.41□□□□□ -2.96
RPA3P35244 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.41□□□□□ -2.96
RPA3P35244 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.41□□□□□ -2.96
RPA3P35244 SNORD116.2-201ENST00000391251 93 ntBASIC-3.41□□□□□ -2.96
RPA3P35244 RNU6-231P-201ENST00000517122 103 ntBASIC-3.41□□□□□ -2.96
RPA3P35244 MIR5588-201ENST00000581890 63 ntBASIC-3.41□□□□□ -2.96
RPA3P35244 RNU6-22P-201ENST00000384355 107 ntBASIC-3.43□□□□□ -2.96
RPA3P35244 RNU6-794P-201ENST00000517261 64 ntBASIC-3.43□□□□□ -2.96
RPA3P35244 MIR4712-201ENST00000583750 82 ntBASIC-3.43□□□□□ -2.96
RPA3P35244 RNU6-361P-201ENST00000364454 107 ntBASIC-3.44□□□□□ -2.96
RPA3P35244 RNU6-209P-201ENST00000384118 107 ntBASIC-3.44□□□□□ -2.96
RPA3P35244 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.44□□□□□ -2.96
RPA3P35244 RNU6-32P-201ENST00000383948 107 ntBASIC-3.45□□□□□ -2.96
RPA3P35244 RNU6-13P-201ENST00000384248 107 ntBASIC-3.45□□□□□ -2.96
RPA3P35244 RNU6-12P-201ENST00000384604 107 ntBASIC-3.45□□□□□ -2.96
RPA3P35244 RNU6-41P-201ENST00000384741 107 ntBASIC-3.45□□□□□ -2.96
RPA3P35244 RNU6-979P-201ENST00000383896 107 ntBASIC-3.46□□□□□ -2.96
RPA3P35244 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.46□□□□□ -2.96
RPA3P35244 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.47□□□□□ -2.96
RPA3P35244 MIR4719-201ENST00000585233 84 ntBASIC-3.47□□□□□ -2.96
RPA3P35244 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.47□□□□□ -2.96
RPA3P35244 RNU6-530P-201ENST00000391180 107 ntBASIC-3.48□□□□□ -2.97
RPA3P35244 MIR1245B-201ENST00000636115 69 ntBASIC-3.48□□□□□ -2.97
RPA3P35244 RNY4P9-201ENST00000363194 97 ntBASIC-3.49□□□□□ -2.97
RPA3P35244 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.49□□□□□ -2.97
RPA3P35244 MIR3134-201ENST00000579433 74 ntBASIC-3.49□□□□□ -2.97
RPA3P35244 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.5□□□□□ -2.97
RPA3P35244 SNORA40B-201ENST00000385573 128 ntBASIC-3.5□□□□□ -2.97
RPA3P35244 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.51□□□□□ -2.97
RPA3P35244 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.51□□□□□ -2.97
RPA3P35244 RNU6-687P-201ENST00000516443 89 ntBASIC-3.51□□□□□ -2.97
RPA3P35244 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.52□□□□□ -2.97
RPA3P35244 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.52□□□□□ -2.97
RPA3P35244 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.53□□□□□ -2.97
RPA3P35244 RNU7-171P-201ENST00000459581 62 ntBASIC-3.53□□□□□ -2.97
RPA3P35244 RNU6-313P-201ENST00000516317 112 ntBASIC-3.53□□□□□ -2.97
RPA3P35244 SNORD113-3-201ENST00000364830 72 ntBASIC-3.55□□□□□ -2.98
RPA3P35244 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.55□□□□□ -2.98
RPA3P35244 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.55□□□□□ -2.98
RPA3P35244 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.55□□□□□ -2.98
RPA3P35244 MIR379-201ENST00000362218 67 ntBASIC-3.56□□□□□ -2.98
RPA3P35244 RNU6-230P-201ENST00000362457 104 ntBASIC-3.56□□□□□ -2.98
RPA3P35244 RNU6-912P-201ENST00000363800 104 ntBASIC-3.57□□□□□ -2.98
RPA3P35244 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.57□□□□□ -2.98
RPA3P35244 RNU6-147P-201ENST00000383983 107 ntBASIC-3.57□□□□□ -2.98
RPA3P35244 MIR4426-201ENST00000640330 63 ntBASIC-3.57□□□□□ -2.98
RPA3P35244 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.58□□□□□ -2.98
RPA3P35244 SNORD45.2-201ENST00000363552 72 ntBASIC-3.58□□□□□ -2.98
RPA3P35244 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.58□□□□□ -2.98
RPA3P35244 RNY4P7-201ENST00000364600 96 ntBASIC-3.59□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms