Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNORD4A-201ENST00000459174 72 ntBASIC-0.07□□□□□ -2.42
RFX1P22670 MIR4788-201ENST00000639104 80 ntBASIC-0.07□□□□□ -2.42
RFX1P22670 SNORD45.2-201ENST00000363552 72 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 SNORD114-28-201ENST00000363610 72 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 SNORD114-11-201ENST00000363738 75 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 MIR204-201ENST00000385200 110 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 SNORD75.1-201ENST00000408373 60 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 RNA5SP169-201ENST00000517268 117 ntBASIC-0.08□□□□□ -2.42
RFX1P22670 SNORD115-33-201ENST00000363723 82 ntBASIC-0.09□□□□□ -2.42
RFX1P22670 SNORD95.1-201ENST00000364099 68 ntBASIC-0.09□□□□□ -2.42
RFX1P22670 SNORA32.1-201ENST00000364514 115 ntBASIC-0.09□□□□□ -2.42
RFX1P22670 AL353691.2-201ENST00000443795 59 ntBASIC-0.09□□□□□ -2.42
RFX1P22670 MIR5683-201ENST00000636514 76 ntBASIC-0.09□□□□□ -2.42
RFX1P22670 MIR409-201ENST00000362237 79 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 MIR101-1-201ENST00000362265 75 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 AP000533.3-201ENST00000447704 118 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 MIR3179-1-201ENST00000578940 84 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 MIR3179-2-201ENST00000579107 84 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 MIR3179-3-201ENST00000579566 84 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 MIR3179-4-201ENST00000617599 84 ntBASIC-0.1□□□□□ -2.43
RFX1P22670 MIR29B1-201ENST00000385015 81 ntBASIC-0.11□□□□□ -2.43
RFX1P22670 RNA5SP300-201ENST00000391197 107 ntBASIC-0.11□□□□□ -2.43
RFX1P22670 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.11□□□□□ -2.43
RFX1P22670 RNY1P9-201ENST00000532431 109 ntBASIC-0.11□□□□□ -2.43
RFX1P22670 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.12□□□□□ -2.43
RFX1P22670 SNORD114-17-201ENST00000364699 75 ntBASIC-0.12□□□□□ -2.43
RFX1P22670 MIR1468-201ENST00000410600 86 ntBASIC-0.12□□□□□ -2.43
RFX1P22670 SNORA13-201ENST00000458790 133 ntBASIC-0.12□□□□□ -2.43
RFX1P22670 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.12□□□□□ -2.43
RFX1P22670 MIR548AL-201ENST00000578416 97 ntBASIC-0.13□□□□□ -2.43
RFX1P22670 SNORA27.2-201ENST00000363365 126 ntBASIC-0.14□□□□□ -2.43
RFX1P22670 RNU6-530P-201ENST00000391180 107 ntBASIC-0.14□□□□□ -2.43
RFX1P22670 RNU6-721P-201ENST00000410155 105 ntBASIC-0.14□□□□□ -2.43
RFX1P22670 SNX3P1X-201ENST00000414887 175 ntBASIC-0.14□□□□□ -2.43
RFX1P22670 RNU6-608P-201ENST00000383927 104 ntBASIC-0.15□□□□□ -2.43
RFX1P22670 MIR4436A-201ENST00000585278 85 ntBASIC-0.15□□□□□ -2.43
RFX1P22670 MIR545-201ENST00000385085 106 ntBASIC-0.16□□□□□ -2.44
RFX1P22670 MIR196A2-201ENST00000385189 110 ntBASIC-0.16□□□□□ -2.44
RFX1P22670 RNA5SP266-201ENST00000410273 108 ntBASIC-0.16□□□□□ -2.44
RFX1P22670 RNU4-63P-201ENST00000411313 118 ntBASIC-0.16□□□□□ -2.44
RFX1P22670 MIR4723-201ENST00000585070 81 ntBASIC-0.16□□□□□ -2.44
RFX1P22670 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.17□□□□□ -2.44
RFX1P22670 RNU6-320P-201ENST00000516511 106 ntBASIC-0.17□□□□□ -2.44
RFX1P22670 MIR548AZ-201ENST00000616567 95 ntBASIC-0.17□□□□□ -2.44
RFX1P22670 RNA5SP275-201ENST00000363936 118 ntBASIC-0.18□□□□□ -2.44
RFX1P22670 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.18□□□□□ -2.44
RFX1P22670 SNORA3B-201ENST00000391305 131 ntBASIC-0.18□□□□□ -2.44
RFX1P22670 SNORD114-25-201ENST00000363742 72 ntBASIC-0.2□□□□□ -2.44
RFX1P22670 RNU6-742P-201ENST00000365289 107 ntBASIC-0.2□□□□□ -2.44
RFX1P22670 RNU6-284P-201ENST00000411105 106 ntBASIC-0.2□□□□□ -2.44
RFX1P22670 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.2□□□□□ -2.44
RFX1P22670 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.21□□□□□ -2.44
RFX1P22670 SNORD126-201ENST00000459475 77 ntBASIC-0.21□□□□□ -2.44
RFX1P22670 RPL35AP4-201ENST00000412007 102 ntBASIC-0.22□□□□□ -2.44
RFX1P22670 RNU6-986P-201ENST00000363133 102 ntBASIC-0.23□□□□□ -2.45
RFX1P22670 MIR548AX-201ENST00000580117 73 ntBASIC-0.23□□□□□ -2.45
RFX1P22670 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.24□□□□□ -2.45
RFX1P22670 MIR507-201ENST00000385234 94 ntBASIC-0.24□□□□□ -2.45
RFX1P22670 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
RFX1P22670 AC021146.6-201ENST00000514659 117 ntBASIC-0.24□□□□□ -2.45
RFX1P22670 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.25□□□□□ -2.45
RFX1P22670 MIR378F-201ENST00000578143 78 ntBASIC-0.25□□□□□ -2.45
RFX1P22670 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.26□□□□□ -2.45
RFX1P22670 RNY3P8-201ENST00000411366 126 ntBASIC-0.26□□□□□ -2.45
RFX1P22670 AL500527.2-201ENST00000454105 95 ntBASIC-0.26□□□□□ -2.45
RFX1P22670 RNU6-10P-201ENST00000384036 107 ntBASIC-0.27□□□□□ -2.45
RFX1P22670 SNORA32.3-201ENST00000384772 121 ntBASIC-0.27□□□□□ -2.45
RFX1P22670 MT-TQ-201ENST00000387372 72 ntBASIC-0.27□□□□□ -2.45
RFX1P22670 RNA5SP461-201ENST00000516451 104 ntBASIC-0.27□□□□□ -2.45
RFX1P22670 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.28□□□□□ -2.45
RFX1P22670 MIR601-201ENST00000385256 79 ntBASIC-0.28□□□□□ -2.45
RFX1P22670 MIR196A1-201ENST00000388006 70 ntBASIC-0.28□□□□□ -2.45
RFX1P22670 MIR4324-201ENST00000584846 72 ntBASIC-0.28□□□□□ -2.45
RFX1P22670 MIR6738-201ENST00000619620 64 ntBASIC-0.28□□□□□ -2.45
RFX1P22670 MIR4426-201ENST00000640330 63 ntBASIC-0.28□□□□□ -2.45
RFX1P22670 SNORD14C-201ENST00000365382 88 ntBASIC-0.29□□□□□ -2.46
RFX1P22670 SNORD64-201ENST00000386683 67 ntBASIC-0.29□□□□□ -2.46
RFX1P22670 MIR202-201ENST00000362219 110 ntBASIC-0.3□□□□□ -2.46
RFX1P22670 RNU6-361P-201ENST00000364454 107 ntBASIC-0.3□□□□□ -2.46
RFX1P22670 RNU6-431P-201ENST00000383874 107 ntBASIC-0.3□□□□□ -2.46
RFX1P22670 MIR587-201ENST00000384845 96 ntBASIC-0.3□□□□□ -2.46
RFX1P22670 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.3□□□□□ -2.46
RFX1P22670 RNU7-134P-201ENST00000458997 64 ntBASIC-0.3□□□□□ -2.46
RFX1P22670 MIR1207-201ENST00000408249 87 ntBASIC-0.32□□□□□ -2.46
RFX1P22670 uc_338.19-201ENST00000616808 99 ntBASIC-0.32□□□□□ -2.46
RFX1P22670 U4.2-201ENST00000618561 85 ntBASIC-0.32□□□□□ -2.46
RFX1P22670 MIR8485-201ENST00000401372 91 ntBASIC-0.33□□□□□ -2.46
RFX1P22670 MIR548H4-201ENST00000408689 111 ntBASIC-0.33□□□□□ -2.46
RFX1P22670 MIR4320-201ENST00000636981 65 ntBASIC-0.33□□□□□ -2.46
RFX1P22670 SNORD114-14-201ENST00000362723 75 ntBASIC-0.34□□□□□ -2.46
RFX1P22670 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.34□□□□□ -2.46
RFX1P22670 SNORD83B-201ENST00000386745 93 ntBASIC-0.34□□□□□ -2.46
RFX1P22670 SNORA17.4-201ENST00000391287 132 ntBASIC-0.34□□□□□ -2.46
RFX1P22670 AC090616.4-201ENST00000448026 115 ntBASIC-0.34□□□□□ -2.46
RFX1P22670 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.34□□□□□ -2.46
RFX1P22670 RNA5SP26-201ENST00000362406 119 ntBASIC-0.35□□□□□ -2.47
RFX1P22670 MIR4499-201ENST00000584834 69 ntBASIC-0.35□□□□□ -2.47
RFX1P22670 SNORD114-3-201ENST00000364969 75 ntBASIC-0.36□□□□□ -2.47
RFX1P22670 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms