Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SNORD116-24-201ENST00000384549 92 ntBASIC-0.74□□□□□ -2.53
KRT3P12035 SNORA41B-201ENST00000384785 128 ntBASIC-0.74□□□□□ -2.53
KRT3P12035 AC108019.1-201ENST00000512540 175 ntBASIC-0.74□□□□□ -2.53
KRT3P12035 MIR4756-201ENST00000577874 78 ntBASIC-0.74□□□□□ -2.53
KRT3P12035 SNORD1B-201ENST00000363091 84 ntBASIC-0.75□□□□□ -2.53
KRT3P12035 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.75□□□□□ -2.53
KRT3P12035 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.75□□□□□ -2.53
KRT3P12035 MIR3170-201ENST00000582699 77 ntBASIC-0.75□□□□□ -2.53
KRT3P12035 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 SNORD115-31-201ENST00000365318 82 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 RNU6-820P-201ENST00000384273 107 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 RNU6-695P-201ENST00000391157 104 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 RNU6-995P-201ENST00000391244 107 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 RNU6-542P-201ENST00000516405 103 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 MIR3134-201ENST00000579433 74 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.76□□□□□ -2.53
KRT3P12035 RNU6-247P-201ENST00000362636 107 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 RNU6-411P-201ENST00000384451 107 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 RNU6-258P-201ENST00000390884 101 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 RNU6-687P-201ENST00000516443 89 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.77□□□□□ -2.53
KRT3P12035 AC120024.2-201ENST00000576526 175 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 MIR3123-201ENST00000583417 75 ntBASIC-0.77□□□□□ -2.53
KRT3P12035 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.78□□□□□ -2.53
KRT3P12035 MIR5582-201ENST00000579697 68 ntBASIC-0.78□□□□□ -2.53
KRT3P12035 RNU6-92P-201ENST00000605893 104 ntBASIC-0.78□□□□□ -2.53
KRT3P12035 RNU6-119P-201ENST00000364882 107 ntBASIC-0.79□□□□□ -2.54
KRT3P12035 RNU6-787P-201ENST00000384032 107 ntBASIC-0.79□□□□□ -2.54
KRT3P12035 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.79□□□□□ -2.54
KRT3P12035 RNU6-172P-201ENST00000411000 93 ntBASIC-0.79□□□□□ -2.54
KRT3P12035 RNU7-151P-201ENST00000516930 53 ntBASIC-0.79□□□□□ -2.54
KRT3P12035 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 RNU4-88P-201ENST00000411220 86 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 RNU6-980P-201ENST00000516925 103 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 MIR548AM-201ENST00000584298 74 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 U7.4-201ENST00000614961 63 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 AC013734.1-201ENST00000619329 111 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 MIR664B-201ENST00000626756 61 ntBASIC-0.8□□□□□ -2.54
KRT3P12035 SNORA27.2-201ENST00000363365 126 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 RNY4P7-201ENST00000364600 96 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 RNU6-841P-201ENST00000383872 107 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 MIR496-201ENST00000385226 102 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
KRT3P12035 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.81□□□□□ -2.54
KRT3P12035 AC005520.4-201ENST00000604337 90 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 AC062037.1-201ENST00000605302 128 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 MIR7978-201ENST00000636158 59 ntBASIC-0.81□□□□□ -2.54
KRT3P12035 RNU6-669P-201ENST00000365575 107 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 MIR579-201ENST00000385221 98 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 MIR125B1-201ENST00000385236 88 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 RNU6-634P-201ENST00000459134 106 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 SNORD63.2-201ENST00000516303 64 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 U6.97-201ENST00000636904 101 ntBASIC-0.82□□□□□ -2.54
KRT3P12035 SNORD60.1-201ENST00000362451 73 ntBASIC-0.83□□□□□ -2.54
KRT3P12035 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.83□□□□□ -2.54
KRT3P12035 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.83□□□□□ -2.54
KRT3P12035 RNU6-663P-201ENST00000391105 106 ntBASIC-0.83□□□□□ -2.54
KRT3P12035 RNU7-160P-201ENST00000516660 62 ntBASIC-0.83□□□□□ -2.54
KRT3P12035 MIR3202-2-201ENST00000635980 79 ntBASIC-0.83□□□□□ -2.54
KRT3P12035 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.84□□□□□ -2.54
KRT3P12035 snoU13.10-201ENST00000459301 103 ntBASIC-0.84□□□□□ -2.54
KRT3P12035 MIR548W-201ENST00000581970 74 ntBASIC-0.84□□□□□ -2.54
KRT3P12035 MIR7110-201ENST00000612638 86 ntBASIC-0.84□□□□□ -2.54
KRT3P12035 RNA5SP405-201ENST00000363059 114 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 SNORA25.4-201ENST00000363666 124 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 RNU6-974P-201ENST00000384099 108 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 RNY3P8-201ENST00000411366 126 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 RNU6-523P-201ENST00000516304 54 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.85□□□□□ -2.55
KRT3P12035 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
KRT3P12035 RNU6-871P-201ENST00000516122 100 ntBASIC-0.86□□□□□ -2.55
KRT3P12035 RNU6-118P-201ENST00000516552 102 ntBASIC-0.86□□□□□ -2.55
KRT3P12035 RNU6-231P-201ENST00000517122 103 ntBASIC-0.86□□□□□ -2.55
KRT3P12035 RNA5SP170-201ENST00000517150 101 ntBASIC-0.86□□□□□ -2.55
KRT3P12035 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.86□□□□□ -2.55
KRT3P12035 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 RNU6-828P-201ENST00000364876 107 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 RNU6-122P-201ENST00000516818 107 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 MIR3139-201ENST00000579145 76 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.87□□□□□ -2.55
KRT3P12035 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms