Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MIR548AA1-201ENST00000384971 97 ntBASIC-1.85□□□□□ -2.71
SIX3O95343 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.86□□□□□ -2.71
SIX3O95343 RNU6-675P-201ENST00000384236 104 ntBASIC-1.86□□□□□ -2.71
SIX3O95343 RNU6-919P-201ENST00000516731 104 ntBASIC-1.86□□□□□ -2.71
SIX3O95343 MIR3170-201ENST00000582699 77 ntBASIC-1.86□□□□□ -2.71
SIX3O95343 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.87□□□□□ -2.71
SIX3O95343 MIR579-201ENST00000385221 98 ntBASIC-1.87□□□□□ -2.71
SIX3O95343 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.87□□□□□ -2.71
SIX3O95343 RNA5SP173-201ENST00000364857 136 ntBASIC-1.88□□□□□ -2.71
SIX3O95343 RNU6-895P-201ENST00000384125 103 ntBASIC-1.88□□□□□ -2.71
SIX3O95343 SNORA41B-201ENST00000384785 128 ntBASIC-1.88□□□□□ -2.71
SIX3O95343 SNORD20-201ENST00000384550 80 ntBASIC-1.89□□□□□ -2.71
SIX3O95343 MIR154-201ENST00000385243 84 ntBASIC-1.89□□□□□ -2.71
SIX3O95343 RNU6-995P-201ENST00000391244 107 ntBASIC-1.89□□□□□ -2.71
SIX3O95343 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.89□□□□□ -2.71
SIX3O95343 RNU6-70P-201ENST00000516438 60 ntBASIC-1.89□□□□□ -2.71
SIX3O95343 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.89□□□□□ -2.71
SIX3O95343 SNORD113-1-201ENST00000365321 69 ntBASIC-1.9□□□□□ -2.71
SIX3O95343 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.9□□□□□ -2.71
SIX3O95343 SNORD116-16-201ENST00000384533 92 ntBASIC-1.9□□□□□ -2.71
SIX3O95343 AC120024.2-201ENST00000576526 175 ntBASIC-1.9□□□□□ -2.71
SIX3O95343 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
SIX3O95343 AL603908.1-201ENST00000406098 201 ntBASIC-1.91□□□□□ -2.72
SIX3O95343 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.92□□□□□ -2.72
SIX3O95343 RNY4P30-201ENST00000410216 95 ntBASIC-1.92□□□□□ -2.72
SIX3O95343 RNU6-789P-201ENST00000517105 102 ntBASIC-1.92□□□□□ -2.72
SIX3O95343 MIR5588-201ENST00000581890 63 ntBASIC-1.92□□□□□ -2.72
SIX3O95343 RNU6-49P-201ENST00000384256 107 ntBASIC-1.93□□□□□ -2.72
SIX3O95343 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.93□□□□□ -2.72
SIX3O95343 RNU6-695P-201ENST00000391157 104 ntBASIC-1.93□□□□□ -2.72
SIX3O95343 SNORD1B-201ENST00000363091 84 ntBASIC-1.94□□□□□ -2.72
SIX3O95343 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.94□□□□□ -2.72
SIX3O95343 RNU6-215P-201ENST00000365169 102 ntBASIC-1.94□□□□□ -2.72
SIX3O95343 RNU7-151P-201ENST00000516930 53 ntBASIC-1.94□□□□□ -2.72
SIX3O95343 MIR23C-201ENST00000579846 100 ntBASIC-1.94□□□□□ -2.72
SIX3O95343 RNU6-315P-201ENST00000362666 107 ntBASIC-1.95□□□□□ -2.72
SIX3O95343 RNU6-563P-201ENST00000364872 108 ntBASIC-1.95□□□□□ -2.72
SIX3O95343 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.95□□□□□ -2.72
SIX3O95343 MIR548AI-201ENST00000579940 88 ntBASIC-1.95□□□□□ -2.72
SIX3O95343 RNU6-258P-201ENST00000390884 101 ntBASIC-1.97□□□□□ -2.72
SIX3O95343 SNORD63.2-201ENST00000516303 64 ntBASIC-1.97□□□□□ -2.72
SIX3O95343 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.97□□□□□ -2.72
SIX3O95343 RNU6-44P-201ENST00000384045 107 ntBASIC-1.98□□□□□ -2.73
SIX3O95343 RNU6-172P-201ENST00000411000 93 ntBASIC-1.98□□□□□ -2.73
SIX3O95343 MIR3123-201ENST00000583417 75 ntBASIC-1.98□□□□□ -2.73
SIX3O95343 MIR494-201ENST00000349529 81 ntBASIC-1.99□□□□□ -2.73
SIX3O95343 RNU6-841P-201ENST00000383872 107 ntBASIC-1.99□□□□□ -2.73
SIX3O95343 RNU6-979P-201ENST00000383896 107 ntBASIC-2□□□□□ -2.73
SIX3O95343 RNA5SP89-201ENST00000410300 108 ntBASIC-2□□□□□ -2.73
SIX3O95343 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2□□□□□ -2.73
SIX3O95343 MIR548AM-201ENST00000584298 74 ntBASIC-2.01□□□□□ -2.73
SIX3O95343 U6.97-201ENST00000636904 101 ntBASIC-2.01□□□□□ -2.73
SIX3O95343 SNORD115-31-201ENST00000365318 82 ntBASIC-2.03□□□□□ -2.73
SIX3O95343 RNU6-669P-201ENST00000365575 107 ntBASIC-2.03□□□□□ -2.73
SIX3O95343 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.03□□□□□ -2.73
SIX3O95343 RNU6-242P-201ENST00000384359 107 ntBASIC-2.04□□□□□ -2.74
SIX3O95343 SNORD116-24-201ENST00000384549 92 ntBASIC-2.04□□□□□ -2.74
SIX3O95343 MIR4712-201ENST00000583750 82 ntBASIC-2.04□□□□□ -2.74
SIX3O95343 MIR1245B-201ENST00000636115 69 ntBASIC-2.04□□□□□ -2.74
SIX3O95343 MIR3134-201ENST00000579433 74 ntBASIC-2.06□□□□□ -2.74
SIX3O95343 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.06□□□□□ -2.74
SIX3O95343 RNU6-987P-201ENST00000384759 104 ntBASIC-2.07□□□□□ -2.74
SIX3O95343 RNU4-88P-201ENST00000411220 86 ntBASIC-2.07□□□□□ -2.74
SIX3O95343 RNU7-171P-201ENST00000459581 62 ntBASIC-2.07□□□□□ -2.74
SIX3O95343 SNORA27.2-201ENST00000363365 126 ntBASIC-2.08□□□□□ -2.74
SIX3O95343 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.08□□□□□ -2.74
SIX3O95343 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.08□□□□□ -2.74
SIX3O95343 MIR7978-201ENST00000636158 59 ntBASIC-2.08□□□□□ -2.74
SIX3O95343 RNU6-974P-201ENST00000384099 108 ntBASIC-2.09□□□□□ -2.74
SIX3O95343 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.09□□□□□ -2.74
SIX3O95343 AC013734.1-201ENST00000619329 111 ntBASIC-2.09□□□□□ -2.74
SIX3O95343 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.1□□□□□ -2.75
SIX3O95343 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.1□□□□□ -2.75
SIX3O95343 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.11□□□□□ -2.75
SIX3O95343 RNY3P8-201ENST00000411366 126 ntBASIC-2.11□□□□□ -2.75
SIX3O95343 RNU6-542P-201ENST00000516405 103 ntBASIC-2.11□□□□□ -2.75
SIX3O95343 RNU6-92P-201ENST00000605893 104 ntBASIC-2.11□□□□□ -2.75
SIX3O95343 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.12□□□□□ -2.75
SIX3O95343 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.12□□□□□ -2.75
SIX3O95343 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.12□□□□□ -2.75
SIX3O95343 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.13□□□□□ -2.75
SIX3O95343 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.13□□□□□ -2.75
SIX3O95343 MIR450A2-201ENST00000385022 100 ntBASIC-2.14□□□□□ -2.75
SIX3O95343 SNORD116.2-201ENST00000391251 93 ntBASIC-2.14□□□□□ -2.75
SIX3O95343 RNA5SP106-201ENST00000517274 100 ntBASIC-2.14□□□□□ -2.75
SIX3O95343 AC005520.4-201ENST00000604337 90 ntBASIC-2.14□□□□□ -2.75
SIX3O95343 RNU6-294P-201ENST00000364999 102 ntBASIC-2.15□□□□□ -2.75
SIX3O95343 RNU6-687P-201ENST00000516443 89 ntBASIC-2.15□□□□□ -2.75
SIX3O95343 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.16□□□□□ -2.76
SIX3O95343 RNU6-523P-201ENST00000516304 54 ntBASIC-2.16□□□□□ -2.76
SIX3O95343 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.16□□□□□ -2.76
SIX3O95343 MIR7110-201ENST00000612638 86 ntBASIC-2.17□□□□□ -2.76
SIX3O95343 RNU6-810P-201ENST00000364001 107 ntBASIC-2.18□□□□□ -2.76
SIX3O95343 RNU6-411P-201ENST00000384451 107 ntBASIC-2.18□□□□□ -2.76
SIX3O95343 RNU6-406P-201ENST00000516470 107 ntBASIC-2.19□□□□□ -2.76
SIX3O95343 MIR548W-201ENST00000581970 74 ntBASIC-2.19□□□□□ -2.76
SIX3O95343 SNORD60.1-201ENST00000362451 73 ntBASIC-2.2□□□□□ -2.76
SIX3O95343 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.2□□□□□ -2.76
SIX3O95343 RNU6-520P-201ENST00000384717 104 ntBASIC-2.2□□□□□ -2.76
SIX3O95343 MIR125B1-201ENST00000385236 88 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 290.9 ms