Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.16□□□□□ -2.76
CHMP2AO43633 AC108019.1-201ENST00000512540 175 ntBASIC-2.17□□□□□ -2.76
CHMP2AO43633 MIR548AI-201ENST00000579940 88 ntBASIC-2.17□□□□□ -2.76
CHMP2AO43633 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.18□□□□□ -2.76
CHMP2AO43633 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.18□□□□□ -2.76
CHMP2AO43633 MIR4756-201ENST00000577874 78 ntBASIC-2.19□□□□□ -2.76
CHMP2AO43633 MIR548AM-201ENST00000584298 74 ntBASIC-2.19□□□□□ -2.76
CHMP2AO43633 RNU6-92P-201ENST00000605893 104 ntBASIC-2.19□□□□□ -2.76
CHMP2AO43633 SNORD60.1-201ENST00000362451 73 ntBASIC-2.2□□□□□ -2.76
CHMP2AO43633 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.2□□□□□ -2.76
CHMP2AO43633 RNU6-841P-201ENST00000383872 107 ntBASIC-2.2□□□□□ -2.76
CHMP2AO43633 MIR601-201ENST00000385256 79 ntBASIC-2.2□□□□□ -2.76
CHMP2AO43633 MIR1246-201ENST00000636535 73 ntBASIC-2.2□□□□□ -2.76
CHMP2AO43633 RNU6-810P-201ENST00000364001 107 ntBASIC-2.21□□□□□ -2.76
CHMP2AO43633 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.21□□□□□ -2.76
CHMP2AO43633 RNU6-787P-201ENST00000384032 107 ntBASIC-2.21□□□□□ -2.76
CHMP2AO43633 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.21□□□□□ -2.76
CHMP2AO43633 MIR1468-201ENST00000410600 86 ntBASIC-2.21□□□□□ -2.76
CHMP2AO43633 RNU6-542P-201ENST00000516405 103 ntBASIC-2.21□□□□□ -2.76
CHMP2AO43633 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.22□□□□□ -2.76
CHMP2AO43633 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.22□□□□□ -2.76
CHMP2AO43633 RNA5SP180-201ENST00000516181 101 ntBASIC-2.23□□□□□ -2.77
CHMP2AO43633 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.24□□□□□ -2.77
CHMP2AO43633 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.24□□□□□ -2.77
CHMP2AO43633 MIR581-201ENST00000384895 96 ntBASIC-2.25□□□□□ -2.77
CHMP2AO43633 SNORD116.2-201ENST00000391251 93 ntBASIC-2.25□□□□□ -2.77
CHMP2AO43633 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.25□□□□□ -2.77
CHMP2AO43633 MIR4666B-201ENST00000578142 81 ntBASIC-2.25□□□□□ -2.77
CHMP2AO43633 RNU6-242P-201ENST00000384359 107 ntBASIC-2.26□□□□□ -2.77
CHMP2AO43633 RNU4-88P-201ENST00000411220 86 ntBASIC-2.26□□□□□ -2.77
CHMP2AO43633 RNU6-231P-201ENST00000517122 103 ntBASIC-2.26□□□□□ -2.77
CHMP2AO43633 MIR7110-201ENST00000612638 86 ntBASIC-2.26□□□□□ -2.77
CHMP2AO43633 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.26□□□□□ -2.77
CHMP2AO43633 MIR202-201ENST00000362219 110 ntBASIC-2.27□□□□□ -2.77
CHMP2AO43633 RNU6-520P-201ENST00000384717 104 ntBASIC-2.27□□□□□ -2.77
CHMP2AO43633 RNU6-983P-201ENST00000516004 103 ntBASIC-2.27□□□□□ -2.77
CHMP2AO43633 snoU13.10-201ENST00000459301 103 ntBASIC-2.28□□□□□ -2.77
CHMP2AO43633 MIR548W-201ENST00000581970 74 ntBASIC-2.29□□□□□ -2.78
CHMP2AO43633 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.3□□□□□ -2.78
CHMP2AO43633 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.3□□□□□ -2.78
CHMP2AO43633 RNU6-649P-201ENST00000384463 107 ntBASIC-2.3□□□□□ -2.78
CHMP2AO43633 MIR450A2-201ENST00000385022 100 ntBASIC-2.3□□□□□ -2.78
CHMP2AO43633 RNU6-294P-201ENST00000364999 102 ntBASIC-2.31□□□□□ -2.78
CHMP2AO43633 RNU6-411P-201ENST00000384451 107 ntBASIC-2.31□□□□□ -2.78
CHMP2AO43633 RNU7-160P-201ENST00000516660 62 ntBASIC-2.31□□□□□ -2.78
CHMP2AO43633 RNU6-980P-201ENST00000516925 103 ntBASIC-2.31□□□□□ -2.78
CHMP2AO43633 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.31□□□□□ -2.78
CHMP2AO43633 RNU6-828P-201ENST00000364876 107 ntBASIC-2.32□□□□□ -2.78
CHMP2AO43633 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.32□□□□□ -2.78
CHMP2AO43633 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.33□□□□□ -2.78
CHMP2AO43633 RNU6-153P-201ENST00000364422 104 ntBASIC-2.34□□□□□ -2.78
CHMP2AO43633 RNU6-663P-201ENST00000391105 106 ntBASIC-2.34□□□□□ -2.78
CHMP2AO43633 MIR1285-2-201ENST00000408311 88 ntBASIC-2.34□□□□□ -2.78
CHMP2AO43633 AC062037.1-201ENST00000605302 128 ntBASIC-2.35□□□□□ -2.79
CHMP2AO43633 MIR664B-201ENST00000626756 61 ntBASIC-2.35□□□□□ -2.79
CHMP2AO43633 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.36□□□□□ -2.79
CHMP2AO43633 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.36□□□□□ -2.79
CHMP2AO43633 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.37□□□□□ -2.79
CHMP2AO43633 RNU6-634P-201ENST00000459134 106 ntBASIC-2.37□□□□□ -2.79
CHMP2AO43633 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.37□□□□□ -2.79
CHMP2AO43633 SNORA40.16-201ENST00000517238 121 ntBASIC-2.37□□□□□ -2.79
CHMP2AO43633 SNORA40B-201ENST00000385573 128 ntBASIC-2.38□□□□□ -2.79
CHMP2AO43633 U7.4-201ENST00000614961 63 ntBASIC-2.38□□□□□ -2.79
CHMP2AO43633 SNORD18C-201ENST00000362704 69 ntBASIC-2.39□□□□□ -2.79
CHMP2AO43633 SNORA25.5-201ENST00000363782 126 ntBASIC-2.39□□□□□ -2.79
CHMP2AO43633 MIR5582-201ENST00000579697 68 ntBASIC-2.39□□□□□ -2.79
CHMP2AO43633 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.4□□□□□ -2.79
CHMP2AO43633 RNU6-530P-201ENST00000391180 107 ntBASIC-2.4□□□□□ -2.79
CHMP2AO43633 AL603908.1-201ENST00000406098 201 ntBASIC-2.4□□□□□ -2.79
CHMP2AO43633 SNORD60-201ENST00000383903 83 ntBASIC-2.41□□□□□ -2.8
CHMP2AO43633 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.41□□□□□ -2.8
CHMP2AO43633 MIR548N-201ENST00000408742 75 ntBASIC-2.41□□□□□ -2.8
CHMP2AO43633 RNU6-122P-201ENST00000516818 107 ntBASIC-2.41□□□□□ -2.8
CHMP2AO43633 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.42□□□□□ -2.8
CHMP2AO43633 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.42□□□□□ -2.8
CHMP2AO43633 SNORA17.4-201ENST00000391287 132 ntBASIC-2.43□□□□□ -2.8
CHMP2AO43633 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.44□□□□□ -2.8
CHMP2AO43633 SNORD30.1-201ENST00000391309 70 ntBASIC-2.44□□□□□ -2.8
CHMP2AO43633 MIR365A-201ENST00000362260 87 ntBASIC-2.45□□□□□ -2.8
CHMP2AO43633 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.45□□□□□ -2.8
CHMP2AO43633 RNU6-406P-201ENST00000516470 107 ntBASIC-2.45□□□□□ -2.8
CHMP2AO43633 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.45□□□□□ -2.8
CHMP2AO43633 MIR4441-201ENST00000582623 100 ntBASIC-2.45□□□□□ -2.8
CHMP2AO43633 SNORA25.4-201ENST00000363666 124 ntBASIC-2.46□□□□□ -2.8
CHMP2AO43633 RNU6-820P-201ENST00000384273 107 ntBASIC-2.46□□□□□ -2.8
CHMP2AO43633 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.46□□□□□ -2.8
CHMP2AO43633 RNU6-361P-201ENST00000364454 107 ntBASIC-2.47□□□□□ -2.8
CHMP2AO43633 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.48□□□□□ -2.81
CHMP2AO43633 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.48□□□□□ -2.81
CHMP2AO43633 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.48□□□□□ -2.81
CHMP2AO43633 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.48□□□□□ -2.81
CHMP2AO43633 U2.22-201ENST00000636441 106 ntBASIC-2.48□□□□□ -2.81
CHMP2AO43633 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.5□□□□□ -2.81
CHMP2AO43633 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.5□□□□□ -2.81
CHMP2AO43633 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.51□□□□□ -2.81
CHMP2AO43633 RNU6-573P-201ENST00000383938 106 ntBASIC-2.51□□□□□ -2.81
CHMP2AO43633 RNU6-118P-201ENST00000516552 102 ntBASIC-2.51□□□□□ -2.81
CHMP2AO43633 MIR4426-201ENST00000640330 63 ntBASIC-2.51□□□□□ -2.81
CHMP2AO43633 RNU6-194P-201ENST00000363862 105 ntBASIC-2.52□□□□□ -2.81
CHMP2AO43633 AL451105.1-201ENST00000450005 189 ntBASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms