Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-974P-201ENST00000384099 108 ntBASIC-0.75□□□□□ -2.53
HDAC3O15379 MT-TQ-201ENST00000387372 72 ntBASIC-0.75□□□□□ -2.53
HDAC3O15379 RNU4-63P-201ENST00000411313 118 ntBASIC-0.75□□□□□ -2.53
HDAC3O15379 MIR6086-201ENST00000638065 55 ntBASIC-0.75□□□□□ -2.53
HDAC3O15379 RNU6-247P-201ENST00000362636 107 ntBASIC-0.76□□□□□ -2.53
HDAC3O15379 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.76□□□□□ -2.53
HDAC3O15379 RNU6-669P-201ENST00000365575 107 ntBASIC-0.76□□□□□ -2.53
HDAC3O15379 SNORD63.2-201ENST00000516303 64 ntBASIC-0.76□□□□□ -2.53
HDAC3O15379 SNORA40.16-201ENST00000517238 121 ntBASIC-0.76□□□□□ -2.53
HDAC3O15379 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.77□□□□□ -2.53
HDAC3O15379 MIR3938-201ENST00000582157 103 ntBASIC-0.77□□□□□ -2.53
HDAC3O15379 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.78□□□□□ -2.53
HDAC3O15379 SNORA40B-201ENST00000385573 128 ntBASIC-0.78□□□□□ -2.53
HDAC3O15379 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.78□□□□□ -2.53
HDAC3O15379 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.79□□□□□ -2.54
HDAC3O15379 RNA5SP476-201ENST00000516613 103 ntBASIC-0.8□□□□□ -2.54
HDAC3O15379 RNY1P9-201ENST00000532431 109 ntBASIC-0.8□□□□□ -2.54
HDAC3O15379 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.81□□□□□ -2.54
HDAC3O15379 RNU7-160P-201ENST00000516660 62 ntBASIC-0.81□□□□□ -2.54
HDAC3O15379 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.81□□□□□ -2.54
HDAC3O15379 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
HDAC3O15379 RNU7-119P-201ENST00000459279 63 ntBASIC-0.82□□□□□ -2.54
HDAC3O15379 RNU6-164P-201ENST00000364604 103 ntBASIC-0.83□□□□□ -2.54
HDAC3O15379 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.83□□□□□ -2.54
HDAC3O15379 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.83□□□□□ -2.54
HDAC3O15379 MIR6874-201ENST00000635894 71 ntBASIC-0.83□□□□□ -2.54
HDAC3O15379 RNU6-446P-201ENST00000362827 106 ntBASIC-0.84□□□□□ -2.54
HDAC3O15379 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.84□□□□□ -2.54
HDAC3O15379 AC091912.2-201ENST00000624798 167 ntBASIC-0.84□□□□□ -2.54
HDAC3O15379 SNORD114-15-201ENST00000364687 72 ntBASIC-0.85□□□□□ -2.55
HDAC3O15379 RNU6-828P-201ENST00000364876 107 ntBASIC-0.85□□□□□ -2.55
HDAC3O15379 RNU6-590P-201ENST00000365039 107 ntBASIC-0.85□□□□□ -2.55
HDAC3O15379 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
HDAC3O15379 RNU6-576P-201ENST00000390854 102 ntBASIC-0.85□□□□□ -2.55
HDAC3O15379 SNORA27.2-201ENST00000363365 126 ntBASIC-0.86□□□□□ -2.55
HDAC3O15379 RNU6-563P-201ENST00000364872 108 ntBASIC-0.86□□□□□ -2.55
HDAC3O15379 RNU6-520P-201ENST00000384717 104 ntBASIC-0.86□□□□□ -2.55
HDAC3O15379 MIR8485-201ENST00000401372 91 ntBASIC-0.86□□□□□ -2.55
HDAC3O15379 AC139453.2-201ENST00000487255 133 ntBASIC-0.86□□□□□ -2.55
HDAC3O15379 MIR378F-201ENST00000578143 78 ntBASIC-0.87□□□□□ -2.55
HDAC3O15379 MIR1468-201ENST00000410600 86 ntBASIC-0.88□□□□□ -2.55
HDAC3O15379 RNY3P8-201ENST00000411366 126 ntBASIC-0.88□□□□□ -2.55
HDAC3O15379 AC018880.2-201ENST00000414265 201 ntBASIC-0.88□□□□□ -2.55
HDAC3O15379 AC125388.1-201ENST00000459631 156 ntBASIC-0.88□□□□□ -2.55
HDAC3O15379 MIR633-201ENST00000384821 98 ntBASIC-0.89□□□□□ -2.55
HDAC3O15379 SCARNA17-201ENST00000516183 144 ntBASIC-0.89□□□□□ -2.55
HDAC3O15379 AC120024.2-201ENST00000576526 175 ntBASIC-0.89□□□□□ -2.55
HDAC3O15379 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.9□□□□□ -2.55
HDAC3O15379 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.9□□□□□ -2.55
HDAC3O15379 RNU6-30P-201ENST00000384561 107 ntBASIC-0.9□□□□□ -2.55
HDAC3O15379 MIR548AX-201ENST00000580117 73 ntBASIC-0.9□□□□□ -2.55
HDAC3O15379 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.9□□□□□ -2.55
HDAC3O15379 RNU6-79P-201ENST00000362511 107 ntBASIC-0.91□□□□□ -2.56
HDAC3O15379 SNORD113-4-201ENST00000364802 75 ntBASIC-0.91□□□□□ -2.56
HDAC3O15379 AC013734.1-201ENST00000619329 111 ntBASIC-0.91□□□□□ -2.56
HDAC3O15379 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.92□□□□□ -2.56
HDAC3O15379 HAR1A.1-201ENST00000459583 118 ntBASIC-0.92□□□□□ -2.56
HDAC3O15379 MIR23C-201ENST00000579846 100 ntBASIC-0.92□□□□□ -2.56
HDAC3O15379 RNU6-829P-201ENST00000363700 112 ntBASIC-0.93□□□□□ -2.56
HDAC3O15379 snoU13.19-201ENST00000459148 104 ntBASIC-0.93□□□□□ -2.56
HDAC3O15379 RNU6-419P-201ENST00000517030 63 ntBASIC-0.94□□□□□ -2.56
HDAC3O15379 AL451105.1-201ENST00000450005 189 ntBASIC-0.95□□□□□ -2.56
HDAC3O15379 RNU6-530P-201ENST00000391180 107 ntBASIC-0.96□□□□□ -2.56
HDAC3O15379 MIR4306-201ENST00000583390 91 ntBASIC-0.96□□□□□ -2.56
HDAC3O15379 MIR202-201ENST00000362219 110 ntBASIC-0.97□□□□□ -2.56
HDAC3O15379 MIR6502-201ENST00000617296 76 ntBASIC-0.97□□□□□ -2.56
HDAC3O15379 AC079150.2-201ENST00000443733 78 ntBASIC-0.98□□□□□ -2.57
HDAC3O15379 U6.97-201ENST00000636904 101 ntBASIC-0.98□□□□□ -2.57
HDAC3O15379 RNU6-400P-201ENST00000391173 106 ntBASIC-1□□□□□ -2.57
HDAC3O15379 MIR548X-201ENST00000580069 75 ntBASIC-1□□□□□ -2.57
HDAC3O15379 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.01□□□□□ -2.57
HDAC3O15379 MIR581-201ENST00000384895 96 ntBASIC-1.02□□□□□ -2.57
HDAC3O15379 MIR4520-1-201ENST00000582609 70 ntBASIC-1.02□□□□□ -2.57
HDAC3O15379 RNU6-361P-201ENST00000364454 107 ntBASIC-1.03□□□□□ -2.57
HDAC3O15379 RNA5SP67-201ENST00000516422 131 ntBASIC-1.03□□□□□ -2.57
HDAC3O15379 SNORD45.2-201ENST00000363552 72 ntBASIC-1.04□□□□□ -2.58
HDAC3O15379 RNU6-499P-201ENST00000365615 107 ntBASIC-1.04□□□□□ -2.58
HDAC3O15379 SNORA17.4-201ENST00000391287 132 ntBASIC-1.04□□□□□ -2.58
HDAC3O15379 MIR4426-201ENST00000640330 63 ntBASIC-1.04□□□□□ -2.58
HDAC3O15379 RNU6-742P-201ENST00000365289 107 ntBASIC-1.05□□□□□ -2.58
HDAC3O15379 RNU6-788P-201ENST00000390967 104 ntBASIC-1.05□□□□□ -2.58
HDAC3O15379 RNU6-695P-201ENST00000391157 104 ntBASIC-1.06□□□□□ -2.58
HDAC3O15379 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
HDAC3O15379 SNORD60-201ENST00000383903 83 ntBASIC-1.07□□□□□ -2.58
HDAC3O15379 MIR548N-201ENST00000408742 75 ntBASIC-1.07□□□□□ -2.58
HDAC3O15379 RNU6-980P-201ENST00000516925 103 ntBASIC-1.07□□□□□ -2.58
HDAC3O15379 RNU6-706P-201ENST00000517229 104 ntBASIC-1.08□□□□□ -2.58
HDAC3O15379 MIR4324-201ENST00000584846 72 ntBASIC-1.08□□□□□ -2.58
HDAC3O15379 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.09□□□□□ -2.58
HDAC3O15379 AC138207.3-201ENST00000585289 166 ntBASIC-1.09□□□□□ -2.58
HDAC3O15379 MIR6738-201ENST00000619620 64 ntBASIC-1.09□□□□□ -2.58
HDAC3O15379 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.1□□□□□ -2.59
HDAC3O15379 RNU4-33P-201ENST00000364316 85 ntBASIC-1.1□□□□□ -2.59
HDAC3O15379 MIR3123-201ENST00000583417 75 ntBASIC-1.1□□□□□ -2.59
HDAC3O15379 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.11□□□□□ -2.59
HDAC3O15379 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.11□□□□□ -2.59
HDAC3O15379 SNORD18C-201ENST00000362704 69 ntBASIC-1.12□□□□□ -2.59
HDAC3O15379 MIR587-201ENST00000384845 96 ntBASIC-1.12□□□□□ -2.59
HDAC3O15379 MIR5591-201ENST00000578248 65 ntBASIC-1.12□□□□□ -2.59
HDAC3O15379 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms