Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 U6.58-201ENST00000613107 107 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.25□□□□□ -2.61
CCDC188H7C350 RNU6-258P-201ENST00000390884 101 ntBASIC-1.25□□□□□ -2.61
CCDC188H7C350 RNU6-141P-201ENST00000410499 105 ntBASIC-1.25□□□□□ -2.61
CCDC188H7C350 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.25□□□□□ -2.61
CCDC188H7C350 MIR5588-201ENST00000581890 63 ntBASIC-1.25□□□□□ -2.61
CCDC188H7C350 MIR5683-201ENST00000636514 76 ntBASIC-1.25□□□□□ -2.61
CCDC188H7C350 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.26□□□□□ -2.61
CCDC188H7C350 MTND4LP1-201ENST00000446263 157 ntBASIC-1.26□□□□□ -2.61
CCDC188H7C350 MIR5693-201ENST00000577722 73 ntBASIC-1.27□□□□□ -2.61
CCDC188H7C350 MIR548V-201ENST00000584165 80 ntBASIC-1.27□□□□□ -2.61
CCDC188H7C350 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.27□□□□□ -2.61
CCDC188H7C350 FTX_4.1-201ENST00000616291 147 ntBASIC-1.27□□□□□ -2.61
CCDC188H7C350 RNU6-315P-201ENST00000362666 107 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 RNU6-698P-201ENST00000363523 107 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 RNU6-34P-201ENST00000364874 107 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 RNU6-587P-201ENST00000391282 106 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 MIR548Q-201ENST00000408404 100 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 MIR4490-201ENST00000582647 84 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 MIR8053-201ENST00000613344 75 ntBASIC-1.28□□□□□ -2.61
CCDC188H7C350 RNY4P9-201ENST00000363194 97 ntBASIC-1.29□□□□□ -2.62
CCDC188H7C350 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.29□□□□□ -2.62
CCDC188H7C350 RNY4P30-201ENST00000410216 95 ntBASIC-1.29□□□□□ -2.62
CCDC188H7C350 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.29□□□□□ -2.62
CCDC188H7C350 U4.4-201ENST00000620626 117 ntBASIC-1.29□□□□□ -2.62
CCDC188H7C350 MIR664A-201ENST00000626086 82 ntBASIC-1.29□□□□□ -2.62
CCDC188H7C350 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.3□□□□□ -2.62
CCDC188H7C350 SNORD113.1-201ENST00000363280 73 ntBASIC-1.3□□□□□ -2.62
CCDC188H7C350 RNU6-668P-201ENST00000364180 107 ntBASIC-1.3□□□□□ -2.62
CCDC188H7C350 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.3□□□□□ -2.62
CCDC188H7C350 RNU6-979P-201ENST00000383896 107 ntBASIC-1.3□□□□□ -2.62
CCDC188H7C350 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.3□□□□□ -2.62
CCDC188H7C350 MIR429-201ENST00000362106 83 ntBASIC-1.31□□□□□ -2.62
CCDC188H7C350 RNU6-608P-201ENST00000383927 104 ntBASIC-1.31□□□□□ -2.62
CCDC188H7C350 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.31□□□□□ -2.62
CCDC188H7C350 SNORD45A-201ENST00000384512 84 ntBASIC-1.31□□□□□ -2.62
CCDC188H7C350 AC120024.2-201ENST00000576526 175 ntBASIC-1.31□□□□□ -2.62
CCDC188H7C350 MIR630-201ENST00000384957 97 ntBASIC-1.32□□□□□ -2.62
CCDC188H7C350 RNU6-696P-201ENST00000390834 107 ntBASIC-1.32□□□□□ -2.62
CCDC188H7C350 RNA5SP106-201ENST00000517274 100 ntBASIC-1.32□□□□□ -2.62
CCDC188H7C350 RNA5SP215-201ENST00000363440 122 ntBASIC-1.33□□□□□ -2.62
CCDC188H7C350 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.33□□□□□ -2.62
CCDC188H7C350 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.34□□□□□ -2.62
CCDC188H7C350 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.34□□□□□ -2.62
CCDC188H7C350 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.34□□□□□ -2.62
CCDC188H7C350 MIR520D-201ENST00000385002 87 ntBASIC-1.35□□□□□ -2.63
CCDC188H7C350 RNU7-171P-201ENST00000459581 62 ntBASIC-1.35□□□□□ -2.63
CCDC188H7C350 AC097484.2-201ENST00000509147 251 ntBASIC-1.35□□□□□ -2.63
CCDC188H7C350 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.35□□□□□ -2.63
CCDC188H7C350 U2.22-201ENST00000636441 106 ntBASIC-1.35□□□□□ -2.63
CCDC188H7C350 MIR509-1-201ENST00000385265 94 ntBASIC-1.36□□□□□ -2.63
CCDC188H7C350 MIR509-2-201ENST00000390724 91 ntBASIC-1.36□□□□□ -2.63
CCDC188H7C350 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.36□□□□□ -2.63
CCDC188H7C350 RNU6-598P-201ENST00000364017 105 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 RNY4P10-201ENST00000365571 96 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 SNORD113-2-201ENST00000391082 72 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.37□□□□□ -2.63
CCDC188H7C350 MIR494-201ENST00000349529 81 ntBASIC-1.38□□□□□ -2.63
CCDC188H7C350 MIR4712-201ENST00000583750 82 ntBASIC-1.38□□□□□ -2.63
CCDC188H7C350 MIR1245B-201ENST00000636115 69 ntBASIC-1.38□□□□□ -2.63
CCDC188H7C350 RNU6-153P-201ENST00000364422 104 ntBASIC-1.39□□□□□ -2.63
CCDC188H7C350 RNU6-242P-201ENST00000384359 107 ntBASIC-1.39□□□□□ -2.63
CCDC188H7C350 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.39□□□□□ -2.63
CCDC188H7C350 RNU6-70P-201ENST00000516438 60 ntBASIC-1.39□□□□□ -2.63
CCDC188H7C350 AC013734.1-201ENST00000619329 111 ntBASIC-1.39□□□□□ -2.63
CCDC188H7C350 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.4□□□□□ -2.63
CCDC188H7C350 RNA5SP173-201ENST00000364857 136 ntBASIC-1.4□□□□□ -2.63
CCDC188H7C350 RNU6-987P-201ENST00000384759 104 ntBASIC-1.4□□□□□ -2.63
CCDC188H7C350 MIR154-201ENST00000385243 84 ntBASIC-1.41□□□□□ -2.64
CCDC188H7C350 RNU6-630P-201ENST00000391258 106 ntBASIC-1.41□□□□□ -2.64
CCDC188H7C350 U2.18-201ENST00000622185 84 ntBASIC-1.41□□□□□ -2.64
CCDC188H7C350 SNORD113-3-201ENST00000364830 72 ntBASIC-1.42□□□□□ -2.64
CCDC188H7C350 MIR450A2-201ENST00000385022 100 ntBASIC-1.42□□□□□ -2.64
CCDC188H7C350 RNY4P25-201ENST00000459254 96 ntBASIC-1.42□□□□□ -2.64
CCDC188H7C350 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.42□□□□□ -2.64
CCDC188H7C350 RNU6-294P-201ENST00000364999 102 ntBASIC-1.43□□□□□ -2.64
CCDC188H7C350 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.43□□□□□ -2.64
CCDC188H7C350 RNU6-895P-201ENST00000384125 103 ntBASIC-1.43□□□□□ -2.64
CCDC188H7C350 SNORD116-16-201ENST00000384533 92 ntBASIC-1.43□□□□□ -2.64
CCDC188H7C350 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.43□□□□□ -2.64
CCDC188H7C350 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.44□□□□□ -2.64
CCDC188H7C350 RNU6-828P-201ENST00000364876 107 ntBASIC-1.44□□□□□ -2.64
CCDC188H7C350 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.44□□□□□ -2.64
CCDC188H7C350 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.44□□□□□ -2.64
CCDC188H7C350 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.44□□□□□ -2.64
CCDC188H7C350 U6.97-201ENST00000636904 101 ntBASIC-1.44□□□□□ -2.64
CCDC188H7C350 SNORA41B-201ENST00000384785 128 ntBASIC-1.45□□□□□ -2.64
CCDC188H7C350 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.46□□□□□ -2.64
CCDC188H7C350 SNORD114-13-201ENST00000364377 74 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms