Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNY1P9-201ENST00000532431 109 ntBASIC-0.25□□□□□ -2.45
NR2E3Q9Y5X4 MIR548AX-201ENST00000580117 73 ntBASIC-0.26□□□□□ -2.45
NR2E3Q9Y5X4 MIR4263-201ENST00000584745 83 ntBASIC-0.26□□□□□ -2.45
NR2E3Q9Y5X4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
NR2E3Q9Y5X4 RNU6-590P-201ENST00000365039 107 ntBASIC-0.27□□□□□ -2.45
NR2E3Q9Y5X4 RNU6-92P-201ENST00000605893 104 ntBASIC-0.27□□□□□ -2.45
NR2E3Q9Y5X4 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
NR2E3Q9Y5X4 SNORA25.5-201ENST00000363782 126 ntBASIC-0.29□□□□□ -2.46
NR2E3Q9Y5X4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.29□□□□□ -2.46
NR2E3Q9Y5X4 AC093726.3-201ENST00000637588 150 ntBASIC-0.29□□□□□ -2.46
NR2E3Q9Y5X4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.29□□□□□ -2.46
NR2E3Q9Y5X4 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.3□□□□□ -2.46
NR2E3Q9Y5X4 RNA5SP192-201ENST00000364404 120 ntBASIC-0.3□□□□□ -2.46
NR2E3Q9Y5X4 SNORD116-16-201ENST00000384533 92 ntBASIC-0.3□□□□□ -2.46
NR2E3Q9Y5X4 MIR527-201ENST00000385244 85 ntBASIC-0.3□□□□□ -2.46
NR2E3Q9Y5X4 AC110620.1-201ENST00000416042 228 ntBASIC-0.3□□□□□ -2.46
NR2E3Q9Y5X4 SNORD60.1-201ENST00000362451 73 ntBASIC-0.31□□□□□ -2.46
NR2E3Q9Y5X4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.31□□□□□ -2.46
NR2E3Q9Y5X4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
NR2E3Q9Y5X4 U6.58-201ENST00000613107 107 ntBASIC-0.31□□□□□ -2.46
NR2E3Q9Y5X4 MIR124-2-201ENST00000385081 109 ntBASIC-0.32□□□□□ -2.46
NR2E3Q9Y5X4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
NR2E3Q9Y5X4 RNU6-669P-201ENST00000365575 107 ntBASIC-0.34□□□□□ -2.46
NR2E3Q9Y5X4 RNU6-122P-201ENST00000516818 107 ntBASIC-0.34□□□□□ -2.46
NR2E3Q9Y5X4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.35□□□□□ -2.47
NR2E3Q9Y5X4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.36□□□□□ -2.47
NR2E3Q9Y5X4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
NR2E3Q9Y5X4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.36□□□□□ -2.47
NR2E3Q9Y5X4 U7.5-201ENST00000517224 61 ntBASIC-0.36□□□□□ -2.47
NR2E3Q9Y5X4 RNU6-598P-201ENST00000364017 105 ntBASIC-0.37□□□□□ -2.47
NR2E3Q9Y5X4 SNORD14C-201ENST00000365382 88 ntBASIC-0.37□□□□□ -2.47
NR2E3Q9Y5X4 MIR518B-201ENST00000385127 83 ntBASIC-0.37□□□□□ -2.47
NR2E3Q9Y5X4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.37□□□□□ -2.47
NR2E3Q9Y5X4 RNU6-924P-201ENST00000362926 108 ntBASIC-0.38□□□□□ -2.47
NR2E3Q9Y5X4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.38□□□□□ -2.47
NR2E3Q9Y5X4 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.39□□□□□ -2.47
NR2E3Q9Y5X4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.39□□□□□ -2.47
NR2E3Q9Y5X4 SNORD1B-201ENST00000363091 84 ntBASIC-0.4□□□□□ -2.47
NR2E3Q9Y5X4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
NR2E3Q9Y5X4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.4□□□□□ -2.47
NR2E3Q9Y5X4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.4□□□□□ -2.47
NR2E3Q9Y5X4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.41□□□□□ -2.48
NR2E3Q9Y5X4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.41□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.41□□□□□ -2.48
NR2E3Q9Y5X4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-940P-201ENST00000363433 104 ntBASIC-0.42□□□□□ -2.48
NR2E3Q9Y5X4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.42□□□□□ -2.48
NR2E3Q9Y5X4 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.42□□□□□ -2.48
NR2E3Q9Y5X4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-788P-201ENST00000390967 104 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 SNORA13-201ENST00000458790 133 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 AC125388.1-201ENST00000459631 156 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 MIR466-201ENST00000580653 84 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.43□□□□□ -2.48
NR2E3Q9Y5X4 MIR429-201ENST00000362106 83 ntBASIC-0.44□□□□□ -2.48
NR2E3Q9Y5X4 MIR204-201ENST00000385200 110 ntBASIC-0.44□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-696P-201ENST00000390834 107 ntBASIC-0.44□□□□□ -2.48
NR2E3Q9Y5X4 U2.18-201ENST00000622185 84 ntBASIC-0.44□□□□□ -2.48
NR2E3Q9Y5X4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.45□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.45□□□□□ -2.48
NR2E3Q9Y5X4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.46□□□□□ -2.48
NR2E3Q9Y5X4 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
NR2E3Q9Y5X4 AP000533.3-201ENST00000447704 118 ntBASIC-0.47□□□□□ -2.48
NR2E3Q9Y5X4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.47□□□□□ -2.48
NR2E3Q9Y5X4 SNORD19-201ENST00000391191 68 ntBASIC-0.48□□□□□ -2.49
NR2E3Q9Y5X4 MIR3938-201ENST00000582157 103 ntBASIC-0.48□□□□□ -2.49
NR2E3Q9Y5X4 RNU6-231P-201ENST00000517122 103 ntBASIC-0.49□□□□□ -2.49
NR2E3Q9Y5X4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.5□□□□□ -2.49
NR2E3Q9Y5X4 RNU6-172P-201ENST00000411000 93 ntBASIC-0.5□□□□□ -2.49
NR2E3Q9Y5X4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
NR2E3Q9Y5X4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.5□□□□□ -2.49
NR2E3Q9Y5X4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.51□□□□□ -2.49
NR2E3Q9Y5X4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.51□□□□□ -2.49
NR2E3Q9Y5X4 MIR4436A-201ENST00000585278 85 ntBASIC-0.51□□□□□ -2.49
NR2E3Q9Y5X4 MT-TQ-201ENST00000387372 72 ntBASIC-0.52□□□□□ -2.49
NR2E3Q9Y5X4 AP002795.1-201ENST00000534879 84 ntBASIC-0.52□□□□□ -2.49
NR2E3Q9Y5X4 RNU6-446P-201ENST00000362827 106 ntBASIC-0.53□□□□□ -2.49
NR2E3Q9Y5X4 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.53□□□□□ -2.49
NR2E3Q9Y5X4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.53□□□□□ -2.49
NR2E3Q9Y5X4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.54□□□□□ -2.5
NR2E3Q9Y5X4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 MIR601-201ENST00000385256 79 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 SNORA3B-201ENST00000391305 131 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 AC021146.6-201ENST00000514659 117 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 MIR7110-201ENST00000612638 86 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 MIR7978-201ENST00000636158 59 ntBASIC-0.55□□□□□ -2.5
NR2E3Q9Y5X4 MIR548AA1-201ENST00000384971 97 ntBASIC-0.56□□□□□ -2.5
NR2E3Q9Y5X4 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.56□□□□□ -2.5
NR2E3Q9Y5X4 RNU7-151P-201ENST00000516930 53 ntBASIC-0.56□□□□□ -2.5
NR2E3Q9Y5X4 SNORA40.16-201ENST00000517238 121 ntBASIC-0.56□□□□□ -2.5
NR2E3Q9Y5X4 MIR3681-201ENST00000580089 72 ntBASIC-0.56□□□□□ -2.5
NR2E3Q9Y5X4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.58□□□□□ -2.5
NR2E3Q9Y5X4 MIR633-201ENST00000384821 98 ntBASIC-0.58□□□□□ -2.5
NR2E3Q9Y5X4 MIR579-201ENST00000385221 98 ntBASIC-0.59□□□□□ -2.5
NR2E3Q9Y5X4 RNU6-810P-201ENST00000364001 107 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms