Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNU6-901P-201ENST00000384593 106 ntBASIC0.49□□□□□ -2.33
HRH3Q9Y5N1 RNU6-732P-201ENST00000516033 103 ntBASIC0.49□□□□□ -2.33
HRH3Q9Y5N1 MIR4315-1-201ENST00000636800 73 ntBASIC0.49□□□□□ -2.33
HRH3Q9Y5N1 MIR4315-2-201ENST00000640925 73 ntBASIC0.49□□□□□ -2.33
HRH3Q9Y5N1 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 MIR548Q-201ENST00000408404 100 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 Y_RNA.613-201ENST00000410726 97 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 AC096531.1-201ENST00000419107 107 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 RNU6-180P-201ENST00000516697 61 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 MIR6507-201ENST00000613630 70 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
HRH3Q9Y5N1 RNU6-1111P-201ENST00000391118 107 ntBASIC0.47□□□□□ -2.33
HRH3Q9Y5N1 SNORD19-201ENST00000391191 68 ntBASIC0.47□□□□□ -2.33
HRH3Q9Y5N1 MIR1197-201ENST00000408818 88 ntBASIC0.47□□□□□ -2.33
HRH3Q9Y5N1 MIR548H2-201ENST00000408874 88 ntBASIC0.47□□□□□ -2.33
HRH3Q9Y5N1 MIR330-201ENST00000362196 94 ntBASIC0.46□□□□□ -2.34
HRH3Q9Y5N1 Y_RNA.433-201ENST00000384089 102 ntBASIC0.46□□□□□ -2.34
HRH3Q9Y5N1 SNORD56B-201ENST00000384713 71 ntBASIC0.46□□□□□ -2.34
HRH3Q9Y5N1 MIR548H4-201ENST00000408689 111 ntBASIC0.46□□□□□ -2.34
HRH3Q9Y5N1 MIR4743-201ENST00000584576 69 ntBASIC0.45□□□□□ -2.34
HRH3Q9Y5N1 AL445193.1-201ENST00000441183 141 ntBASIC0.44□□□□□ -2.34
HRH3Q9Y5N1 AP002795.1-201ENST00000534879 84 ntBASIC0.44□□□□□ -2.34
HRH3Q9Y5N1 MIR6854-201ENST00000614935 69 ntBASIC0.44□□□□□ -2.34
HRH3Q9Y5N1 SNORA42.1-201ENST00000363515 137 ntBASIC0.43□□□□□ -2.34
HRH3Q9Y5N1 SNORD45.2-201ENST00000363552 72 ntBASIC0.43□□□□□ -2.34
HRH3Q9Y5N1 MIR593-201ENST00000384856 100 ntBASIC0.43□□□□□ -2.34
HRH3Q9Y5N1 U6.103-201ENST00000637085 61 ntBASIC0.43□□□□□ -2.34
HRH3Q9Y5N1 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
HRH3Q9Y5N1 AC114755.3-201ENST00000481111 251 ntBASIC0.42□□□□□ -2.34
HRH3Q9Y5N1 RNU7-159P-201ENST00000459284 62 ntBASIC0.41□□□□□ -2.34
HRH3Q9Y5N1 RNU6-59P-201ENST00000384787 107 ntBASIC0.4□□□□□ -2.35
HRH3Q9Y5N1 AC244250.2-201ENST00000418731 148 ntBASIC0.4□□□□□ -2.35
HRH3Q9Y5N1 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
HRH3Q9Y5N1 AC138207.3-201ENST00000585289 166 ntBASIC0.39□□□□□ -2.35
HRH3Q9Y5N1 AC104408.1-201ENST00000605241 170 ntBASIC0.39□□□□□ -2.35
HRH3Q9Y5N1 RNU6-1233P-201ENST00000362922 102 ntBASIC0.38□□□□□ -2.35
HRH3Q9Y5N1 MIR1468-201ENST00000410600 86 ntBASIC0.38□□□□□ -2.35
HRH3Q9Y5N1 SNORA62.5-201ENST00000516634 120 ntBASIC0.38□□□□□ -2.35
HRH3Q9Y5N1 Y_RNA.699-201ENST00000516803 93 ntBASIC0.38□□□□□ -2.35
HRH3Q9Y5N1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.38□□□□□ -2.35
HRH3Q9Y5N1 MIR4426-201ENST00000640330 63 ntBASIC0.38□□□□□ -2.35
HRH3Q9Y5N1 Y_RNA.321-201ENST00000365149 102 ntBASIC0.37□□□□□ -2.35
HRH3Q9Y5N1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
HRH3Q9Y5N1 MIR145-201ENST00000384967 88 ntBASIC0.36□□□□□ -2.35
HRH3Q9Y5N1 RNY3P8-201ENST00000411366 126 ntBASIC0.36□□□□□ -2.35
HRH3Q9Y5N1 RNU7-165P-201ENST00000458864 60 ntBASIC0.36□□□□□ -2.35
HRH3Q9Y5N1 SNORD38.3-201ENST00000516599 73 ntBASIC0.36□□□□□ -2.35
HRH3Q9Y5N1 RNA5SP214-201ENST00000363378 118 ntBASIC0.35□□□□□ -2.35
HRH3Q9Y5N1 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
HRH3Q9Y5N1 MIR4514-201ENST00000581410 57 ntBASIC0.35□□□□□ -2.35
HRH3Q9Y5N1 MIR202-201ENST00000362219 110 ntBASIC0.34□□□□□ -2.36
HRH3Q9Y5N1 RNU6-1326P-201ENST00000391262 107 ntBASIC0.34□□□□□ -2.36
HRH3Q9Y5N1 MIR4280-201ENST00000582178 76 ntBASIC0.34□□□□□ -2.36
HRH3Q9Y5N1 MIR2909-201ENST00000617113 69 ntBASIC0.34□□□□□ -2.36
HRH3Q9Y5N1 SNORA27.2-201ENST00000363365 126 ntBASIC0.33□□□□□ -2.36
HRH3Q9Y5N1 Y_RNA.206-201ENST00000364136 102 ntBASIC0.33□□□□□ -2.36
HRH3Q9Y5N1 Y_RNA.345-201ENST00000365384 92 ntBASIC0.33□□□□□ -2.36
HRH3Q9Y5N1 RNU6-608P-201ENST00000383927 104 ntBASIC0.33□□□□□ -2.36
HRH3Q9Y5N1 MIR655-201ENST00000362159 97 ntBASIC0.32□□□□□ -2.36
HRH3Q9Y5N1 SNORD114-5-201ENST00000362928 70 ntBASIC0.32□□□□□ -2.36
HRH3Q9Y5N1 RNA5SP476-201ENST00000516613 103 ntBASIC0.32□□□□□ -2.36
HRH3Q9Y5N1 SNORD18.2-201ENST00000459604 70 ntBASIC0.31□□□□□ -2.36
HRH3Q9Y5N1 MIR5683-201ENST00000636514 76 ntBASIC0.31□□□□□ -2.36
HRH3Q9Y5N1 MIR4317-201ENST00000637586 65 ntBASIC0.31□□□□□ -2.36
HRH3Q9Y5N1 RNU6-46P-201ENST00000383860 107 ntBASIC0.3□□□□□ -2.36
HRH3Q9Y5N1 RNA5SP63-201ENST00000391225 112 ntBASIC0.3□□□□□ -2.36
HRH3Q9Y5N1 RPL35AP4-201ENST00000412007 102 ntBASIC0.3□□□□□ -2.36
HRH3Q9Y5N1 RNA5SP169-201ENST00000517268 117 ntBASIC0.3□□□□□ -2.36
HRH3Q9Y5N1 RNU6-1047P-201ENST00000364418 107 ntBASIC0.29□□□□□ -2.36
HRH3Q9Y5N1 HAR1A.1-201ENST00000459583 118 ntBASIC0.29□□□□□ -2.36
HRH3Q9Y5N1 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
HRH3Q9Y5N1 RNU6-929P-201ENST00000384429 107 ntBASIC0.27□□□□□ -2.37
HRH3Q9Y5N1 AC023932.2-201ENST00000603176 175 ntBASIC0.27□□□□□ -2.37
HRH3Q9Y5N1 SNORA26.4-201ENST00000391188 123 ntBASIC0.26□□□□□ -2.37
HRH3Q9Y5N1 MIR6851-201ENST00000617060 67 ntBASIC0.26□□□□□ -2.37
HRH3Q9Y5N1 SNORD114-9-201ENST00000364370 72 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 SNORD49B-201ENST00000365172 72 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 AL353691.2-201ENST00000443795 59 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 RNU6-300P-201ENST00000459080 104 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 SNORD22.1-201ENST00000516331 125 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 MIR6086-201ENST00000638065 55 ntBASIC0.25□□□□□ -2.37
HRH3Q9Y5N1 RNU6-361P-201ENST00000364454 107 ntBASIC0.24□□□□□ -2.37
HRH3Q9Y5N1 AC104692.1-201ENST00000472406 90 ntBASIC0.24□□□□□ -2.37
HRH3Q9Y5N1 SNORD114-17-201ENST00000364699 75 ntBASIC0.23□□□□□ -2.37
HRH3Q9Y5N1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
HRH3Q9Y5N1 SNORA17.4-201ENST00000391287 132 ntBASIC0.23□□□□□ -2.37
HRH3Q9Y5N1 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
HRH3Q9Y5N1 SNORD111B-201ENST00000408587 80 ntBASIC0.21□□□□□ -2.38
HRH3Q9Y5N1 SNORD74.6-201ENST00000364796 70 ntBASIC0.2□□□□□ -2.38
HRH3Q9Y5N1 MIR507-201ENST00000385234 94 ntBASIC0.2□□□□□ -2.38
HRH3Q9Y5N1 RNY1P9-201ENST00000532431 109 ntBASIC0.2□□□□□ -2.38
HRH3Q9Y5N1 MIR4263-201ENST00000584745 83 ntBASIC0.2□□□□□ -2.38
HRH3Q9Y5N1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
HRH3Q9Y5N1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.2□□□□□ -2.38
HRH3Q9Y5N1 SNORD115-33-201ENST00000363723 82 ntBASIC0.19□□□□□ -2.38
HRH3Q9Y5N1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
HRH3Q9Y5N1 AP000533.3-201ENST00000447704 118 ntBASIC0.19□□□□□ -2.38
HRH3Q9Y5N1 AL590491.3-201ENST00000610731 82 ntBASIC0.19□□□□□ -2.38
HRH3Q9Y5N1 AC013734.1-201ENST00000619329 111 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 272.5 ms