Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR4317-201ENST00000637586 65 ntBASIC0.65□□□□□ -2.31
LMCD1Q9NZU5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LMCD1Q9NZU5 SNORA27.2-201ENST00000363365 126 ntBASIC0.64□□□□□ -2.31
LMCD1Q9NZU5 RNU6-900P-201ENST00000384498 102 ntBASIC0.64□□□□□ -2.31
LMCD1Q9NZU5 AC108740.1-201ENST00000498629 225 ntBASIC0.64□□□□□ -2.31
LMCD1Q9NZU5 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
LMCD1Q9NZU5 RNU6-863P-201ENST00000515989 104 ntBASIC0.63□□□□□ -2.31
LMCD1Q9NZU5 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
LMCD1Q9NZU5 RNU6-361P-201ENST00000364454 107 ntBASIC0.62□□□□□ -2.31
LMCD1Q9NZU5 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
LMCD1Q9NZU5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
LMCD1Q9NZU5 RNU6-485P-201ENST00000363475 107 ntBASIC0.61□□□□□ -2.31
LMCD1Q9NZU5 RNU6-127P-201ENST00000390897 107 ntBASIC0.61□□□□□ -2.31
LMCD1Q9NZU5 SNORA68.3-201ENST00000515906 83 ntBASIC0.61□□□□□ -2.31
LMCD1Q9NZU5 AP002795.1-201ENST00000534879 84 ntBASIC0.61□□□□□ -2.31
LMCD1Q9NZU5 RNU6-133P-201ENST00000383989 107 ntBASIC0.6□□□□□ -2.31
LMCD1Q9NZU5 RNA5SP476-201ENST00000516613 103 ntBASIC0.6□□□□□ -2.31
LMCD1Q9NZU5 Y_RNA.699-201ENST00000516803 93 ntBASIC0.6□□□□□ -2.31
LMCD1Q9NZU5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.59□□□□□ -2.31
LMCD1Q9NZU5 RNU6-455P-201ENST00000384681 107 ntBASIC0.59□□□□□ -2.31
LMCD1Q9NZU5 MIR548Q-201ENST00000408404 100 ntBASIC0.59□□□□□ -2.31
LMCD1Q9NZU5 MIR2909-201ENST00000617113 69 ntBASIC0.59□□□□□ -2.31
LMCD1Q9NZU5 MIR202-201ENST00000362219 110 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 RNU6-1233P-201ENST00000362922 102 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 MIR548H2-201ENST00000408874 88 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 RNY3P8-201ENST00000411366 126 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 AC114755.3-201ENST00000481111 251 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 MIR6854-201ENST00000614935 69 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 MIR6514-201ENST00000622549 70 ntBASIC0.58□□□□□ -2.32
LMCD1Q9NZU5 RNU6-608P-201ENST00000383927 104 ntBASIC0.57□□□□□ -2.32
LMCD1Q9NZU5 RNU6-815P-201ENST00000384080 113 ntBASIC0.57□□□□□ -2.32
LMCD1Q9NZU5 SNORD56B-201ENST00000384713 71 ntBASIC0.57□□□□□ -2.32
LMCD1Q9NZU5 MIR124-2-201ENST00000385081 109 ntBASIC0.57□□□□□ -2.32
LMCD1Q9NZU5 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
LMCD1Q9NZU5 MIR643-201ENST00000385267 97 ntBASIC0.56□□□□□ -2.32
LMCD1Q9NZU5 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
LMCD1Q9NZU5 RNU6-300P-201ENST00000459080 104 ntBASIC0.55□□□□□ -2.32
LMCD1Q9NZU5 CR383656.4-201ENST00000546909 122 ntBASIC0.55□□□□□ -2.32
LMCD1Q9NZU5 SNORA50A-201ENST00000384225 134 ntBASIC0.54□□□□□ -2.32
LMCD1Q9NZU5 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
LMCD1Q9NZU5 RNA5SP169-201ENST00000517268 117 ntBASIC0.54□□□□□ -2.32
LMCD1Q9NZU5 MIR148A-201ENST00000362215 68 ntBASIC0.53□□□□□ -2.32
LMCD1Q9NZU5 MIRLET7D-201ENST00000362263 87 ntBASIC0.53□□□□□ -2.32
LMCD1Q9NZU5 RNA5SP63-201ENST00000391225 112 ntBASIC0.53□□□□□ -2.32
LMCD1Q9NZU5 SNORA17.4-201ENST00000391287 132 ntBASIC0.53□□□□□ -2.32
LMCD1Q9NZU5 HAR1A.1-201ENST00000459583 118 ntBASIC0.52□□□□□ -2.33
LMCD1Q9NZU5 RNU6-180P-201ENST00000516697 61 ntBASIC0.52□□□□□ -2.33
LMCD1Q9NZU5 AC023932.2-201ENST00000603176 175 ntBASIC0.52□□□□□ -2.33
LMCD1Q9NZU5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.51□□□□□ -2.33
LMCD1Q9NZU5 AC244250.2-201ENST00000418731 148 ntBASIC0.5□□□□□ -2.33
LMCD1Q9NZU5 RNA5SP163-201ENST00000410304 99 ntBASIC0.49□□□□□ -2.33
LMCD1Q9NZU5 RNA5SP285-201ENST00000516619 119 ntBASIC0.49□□□□□ -2.33
LMCD1Q9NZU5 RNY1P9-201ENST00000532431 109 ntBASIC0.49□□□□□ -2.33
LMCD1Q9NZU5 MIR5683-201ENST00000636514 76 ntBASIC0.49□□□□□ -2.33
LMCD1Q9NZU5 MIR4280-201ENST00000582178 76 ntBASIC0.48□□□□□ -2.33
LMCD1Q9NZU5 MIR655-201ENST00000362159 97 ntBASIC0.47□□□□□ -2.33
LMCD1Q9NZU5 SNORA26.4-201ENST00000391188 123 ntBASIC0.47□□□□□ -2.33
LMCD1Q9NZU5 MIR4514-201ENST00000581410 57 ntBASIC0.47□□□□□ -2.33
LMCD1Q9NZU5 RNU6-901P-201ENST00000384593 106 ntBASIC0.46□□□□□ -2.34
LMCD1Q9NZU5 MIR548N-201ENST00000408742 75 ntBASIC0.46□□□□□ -2.34
LMCD1Q9NZU5 RNU6-176P-201ENST00000517196 105 ntBASIC0.46□□□□□ -2.34
LMCD1Q9NZU5 AC069113.3-201ENST00000521019 150 ntBASIC0.46□□□□□ -2.34
LMCD1Q9NZU5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
LMCD1Q9NZU5 MIR892B-201ENST00000401279 77 ntBASIC0.44□□□□□ -2.34
LMCD1Q9NZU5 AL353691.2-201ENST00000443795 59 ntBASIC0.44□□□□□ -2.34
LMCD1Q9NZU5 AC090625.1-201ENST00000357130 210 ntBASIC0.43□□□□□ -2.34
LMCD1Q9NZU5 MIR581-201ENST00000384895 96 ntBASIC0.42□□□□□ -2.34
LMCD1Q9NZU5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.42□□□□□ -2.34
LMCD1Q9NZU5 AL445193.1-201ENST00000441183 141 ntBASIC0.42□□□□□ -2.34
LMCD1Q9NZU5 RNU6-68P-201ENST00000516576 104 ntBASIC0.42□□□□□ -2.34
LMCD1Q9NZU5 SNORD115-33-201ENST00000363723 82 ntBASIC0.41□□□□□ -2.34
LMCD1Q9NZU5 Y_RNA.382-201ENST00000365672 114 ntBASIC0.41□□□□□ -2.34
LMCD1Q9NZU5 SNORD60-201ENST00000383903 83 ntBASIC0.41□□□□□ -2.34
LMCD1Q9NZU5 MIR593-201ENST00000384856 100 ntBASIC0.41□□□□□ -2.34
LMCD1Q9NZU5 MIR6851-201ENST00000617060 67 ntBASIC0.41□□□□□ -2.34
LMCD1Q9NZU5 SNORD38.3-201ENST00000516599 73 ntBASIC0.4□□□□□ -2.35
LMCD1Q9NZU5 AC013734.1-201ENST00000619329 111 ntBASIC0.4□□□□□ -2.35
LMCD1Q9NZU5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.4□□□□□ -2.35
LMCD1Q9NZU5 MIR6086-201ENST00000638065 55 ntBASIC0.4□□□□□ -2.35
LMCD1Q9NZU5 RNU7-165P-201ENST00000458864 60 ntBASIC0.39□□□□□ -2.35
LMCD1Q9NZU5 Y_RNA.134-201ENST00000363435 105 ntBASIC0.38□□□□□ -2.35
LMCD1Q9NZU5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
LMCD1Q9NZU5 RPL35AP4-201ENST00000412007 102 ntBASIC0.38□□□□□ -2.35
LMCD1Q9NZU5 SNORD18.2-201ENST00000459604 70 ntBASIC0.38□□□□□ -2.35
LMCD1Q9NZU5 Y_RNA.320-201ENST00000365144 102 ntBASIC0.37□□□□□ -2.35
LMCD1Q9NZU5 RNA5SP67-201ENST00000516422 131 ntBASIC0.37□□□□□ -2.35
LMCD1Q9NZU5 MIR4743-201ENST00000584576 69 ntBASIC0.37□□□□□ -2.35
LMCD1Q9NZU5 Y_RNA.223-201ENST00000364290 113 ntBASIC0.36□□□□□ -2.35
LMCD1Q9NZU5 SNORD74.6-201ENST00000364796 70 ntBASIC0.36□□□□□ -2.35
LMCD1Q9NZU5 MIR145-201ENST00000384967 88 ntBASIC0.35□□□□□ -2.35
LMCD1Q9NZU5 MIR610-201ENST00000385139 96 ntBASIC0.35□□□□□ -2.35
LMCD1Q9NZU5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.35□□□□□ -2.35
LMCD1Q9NZU5 SNORD22.1-201ENST00000516331 125 ntBASIC0.34□□□□□ -2.36
LMCD1Q9NZU5 MIR6759-201ENST00000638110 65 ntBASIC0.34□□□□□ -2.36
LMCD1Q9NZU5 RNU7-159P-201ENST00000459284 62 ntBASIC0.33□□□□□ -2.36
LMCD1Q9NZU5 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
LMCD1Q9NZU5 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
LMCD1Q9NZU5 SNORD114-17-201ENST00000364699 75 ntBASIC0.32□□□□□ -2.36
LMCD1Q9NZU5 SNORD115.2-201ENST00000391126 59 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms