Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MIR6818-201ENST00000621576 65 ntBASIC-1.29□□□□□ -2.62
RNF41Q9H4P4 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.3□□□□□ -2.62
RNF41Q9H4P4 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.3□□□□□ -2.62
RNF41Q9H4P4 RNA5SP215-201ENST00000363440 122 ntBASIC-1.3□□□□□ -2.62
RNF41Q9H4P4 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.3□□□□□ -2.62
RNF41Q9H4P4 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.31□□□□□ -2.62
RNF41Q9H4P4 RNU6-668P-201ENST00000364180 107 ntBASIC-1.32□□□□□ -2.62
RNF41Q9H4P4 MIR450A2-201ENST00000385022 100 ntBASIC-1.32□□□□□ -2.62
RNF41Q9H4P4 MIR527-201ENST00000385244 85 ntBASIC-1.32□□□□□ -2.62
RNF41Q9H4P4 SNX3P1X-201ENST00000414887 175 ntBASIC-1.32□□□□□ -2.62
RNF41Q9H4P4 MIR4666B-201ENST00000578142 81 ntBASIC-1.32□□□□□ -2.62
RNF41Q9H4P4 MIR5683-201ENST00000636514 76 ntBASIC-1.32□□□□□ -2.62
RNF41Q9H4P4 MIR494-201ENST00000349529 81 ntBASIC-1.33□□□□□ -2.62
RNF41Q9H4P4 RNU6-294P-201ENST00000364999 102 ntBASIC-1.33□□□□□ -2.62
RNF41Q9H4P4 MIR630-201ENST00000384957 97 ntBASIC-1.33□□□□□ -2.62
RNF41Q9H4P4 RNU7-134P-201ENST00000458997 64 ntBASIC-1.33□□□□□ -2.62
RNF41Q9H4P4 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.34□□□□□ -2.62
RNF41Q9H4P4 RNU6-696P-201ENST00000390834 107 ntBASIC-1.34□□□□□ -2.62
RNF41Q9H4P4 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.34□□□□□ -2.62
RNF41Q9H4P4 RNU6-787P-201ENST00000384032 107 ntBASIC-1.35□□□□□ -2.63
RNF41Q9H4P4 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.35□□□□□ -2.63
RNF41Q9H4P4 SNORD113-2-201ENST00000391082 72 ntBASIC-1.35□□□□□ -2.63
RNF41Q9H4P4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.35□□□□□ -2.63
RNF41Q9H4P4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.36□□□□□ -2.63
RNF41Q9H4P4 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.36□□□□□ -2.63
RNF41Q9H4P4 MIR5582-201ENST00000579697 68 ntBASIC-1.36□□□□□ -2.63
RNF41Q9H4P4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.36□□□□□ -2.63
RNF41Q9H4P4 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.37□□□□□ -2.63
RNF41Q9H4P4 RNU6-242P-201ENST00000384359 107 ntBASIC-1.37□□□□□ -2.63
RNF41Q9H4P4 SNORD116-24-201ENST00000384549 92 ntBASIC-1.37□□□□□ -2.63
RNF41Q9H4P4 MIR507-201ENST00000385234 94 ntBASIC-1.37□□□□□ -2.63
RNF41Q9H4P4 RNU6-70P-201ENST00000516438 60 ntBASIC-1.37□□□□□ -2.63
RNF41Q9H4P4 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.37□□□□□ -2.63
RNF41Q9H4P4 RNA5SP331-201ENST00000364986 107 ntBASIC-1.38□□□□□ -2.63
RNF41Q9H4P4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.39□□□□□ -2.63
RNF41Q9H4P4 MIR4490-201ENST00000582647 84 ntBASIC-1.39□□□□□ -2.63
RNF41Q9H4P4 MIR429-201ENST00000362106 83 ntBASIC-1.4□□□□□ -2.63
RNF41Q9H4P4 MIR601-201ENST00000385256 79 ntBASIC-1.4□□□□□ -2.63
RNF41Q9H4P4 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.41□□□□□ -2.64
RNF41Q9H4P4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.41□□□□□ -2.64
RNF41Q9H4P4 RNU6-820P-201ENST00000384273 107 ntBASIC-1.41□□□□□ -2.64
RNF41Q9H4P4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.41□□□□□ -2.64
RNF41Q9H4P4 MIR548Q-201ENST00000408404 100 ntBASIC-1.41□□□□□ -2.64
RNF41Q9H4P4 MIR3134-201ENST00000579433 74 ntBASIC-1.41□□□□□ -2.64
RNF41Q9H4P4 SNORD115-31-201ENST00000365318 82 ntBASIC-1.42□□□□□ -2.64
RNF41Q9H4P4 SNORA41B-201ENST00000384785 128 ntBASIC-1.42□□□□□ -2.64
RNF41Q9H4P4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.42□□□□□ -2.64
RNF41Q9H4P4 RNU6-687P-201ENST00000516443 89 ntBASIC-1.43□□□□□ -2.64
RNF41Q9H4P4 AC062037.1-201ENST00000605302 128 ntBASIC-1.43□□□□□ -2.64
RNF41Q9H4P4 AL627230.5-201ENST00000619807 58 ntBASIC-1.43□□□□□ -2.64
RNF41Q9H4P4 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 MIR154-201ENST00000385243 84 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 AC090616.4-201ENST00000448026 115 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 U2.18-201ENST00000622185 84 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 MIR198-201ENST00000637333 62 ntBASIC-1.44□□□□□ -2.64
RNF41Q9H4P4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.45□□□□□ -2.64
RNF41Q9H4P4 RNU6-576P-201ENST00000390854 102 ntBASIC-1.45□□□□□ -2.64
RNF41Q9H4P4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.45□□□□□ -2.64
RNF41Q9H4P4 MIR520D-201ENST00000385002 87 ntBASIC-1.46□□□□□ -2.64
RNF41Q9H4P4 RNU6-630P-201ENST00000391258 106 ntBASIC-1.46□□□□□ -2.64
RNF41Q9H4P4 MIR1285-2-201ENST00000408311 88 ntBASIC-1.46□□□□□ -2.64
RNF41Q9H4P4 MIR1468-201ENST00000410600 86 ntBASIC-1.46□□□□□ -2.64
RNF41Q9H4P4 RNA5SP173-201ENST00000364857 136 ntBASIC-1.47□□□□□ -2.64
RNF41Q9H4P4 RNU6-608P-201ENST00000383927 104 ntBASIC-1.48□□□□□ -2.65
RNF41Q9H4P4 RNU6-895P-201ENST00000384125 103 ntBASIC-1.48□□□□□ -2.65
RNF41Q9H4P4 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.49□□□□□ -2.65
RNF41Q9H4P4 MIR365A-201ENST00000362260 87 ntBASIC-1.51□□□□□ -2.65
RNF41Q9H4P4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.51□□□□□ -2.65
RNF41Q9H4P4 HLA-S-202ENST00000425174 53 ntBASIC-1.51□□□□□ -2.65
RNF41Q9H4P4 AC091912.2-201ENST00000624798 167 ntBASIC-1.51□□□□□ -2.65
RNF41Q9H4P4 SNORD1B-201ENST00000363091 84 ntBASIC-1.52□□□□□ -2.65
RNF41Q9H4P4 MIR8485-201ENST00000401372 91 ntBASIC-1.52□□□□□ -2.65
RNF41Q9H4P4 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.52□□□□□ -2.65
RNF41Q9H4P4 MIR1246-201ENST00000636535 73 ntBASIC-1.52□□□□□ -2.65
RNF41Q9H4P4 RNU6-226P-201ENST00000363778 107 ntBASIC-1.53□□□□□ -2.65
RNF41Q9H4P4 RNU6-411P-201ENST00000384451 107 ntBASIC-1.53□□□□□ -2.65
RNF41Q9H4P4 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.53□□□□□ -2.65
RNF41Q9H4P4 MIR4441-201ENST00000582623 100 ntBASIC-1.53□□□□□ -2.65
RNF41Q9H4P4 MIR3170-201ENST00000582699 77 ntBASIC-1.53□□□□□ -2.65
RNF41Q9H4P4 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.54□□□□□ -2.66
RNF41Q9H4P4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.54□□□□□ -2.66
RNF41Q9H4P4 MIR6874-201ENST00000635894 71 ntBASIC-1.54□□□□□ -2.66
RNF41Q9H4P4 RNU6-542P-201ENST00000516405 103 ntBASIC-1.55□□□□□ -2.66
RNF41Q9H4P4 AC138207.3-201ENST00000585289 166 ntBASIC-1.55□□□□□ -2.66
RNF41Q9H4P4 U7.4-201ENST00000614961 63 ntBASIC-1.55□□□□□ -2.66
RNF41Q9H4P4 U4.2-201ENST00000618561 85 ntBASIC-1.55□□□□□ -2.66
RNF41Q9H4P4 MIR889-201ENST00000401280 79 ntBASIC-1.56□□□□□ -2.66
RNF41Q9H4P4 RNA5SP170-201ENST00000517150 101 ntBASIC-1.56□□□□□ -2.66
RNF41Q9H4P4 SNORD73B-201ENST00000364394 72 ntBASIC-1.57□□□□□ -2.66
RNF41Q9H4P4 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.58□□□□□ -2.66
RNF41Q9H4P4 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.58□□□□□ -2.66
RNF41Q9H4P4 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.58□□□□□ -2.66
RNF41Q9H4P4 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.58□□□□□ -2.66
RNF41Q9H4P4 MIR6502-201ENST00000617296 76 ntBASIC-1.58□□□□□ -2.66
RNF41Q9H4P4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.59□□□□□ -2.66
RNF41Q9H4P4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
RNF41Q9H4P4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.59□□□□□ -2.66
RNF41Q9H4P4 RNU6-634P-201ENST00000459134 106 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms