Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 MIR509-2-201ENST00000390724 91 ntBASIC-3.66□□□□□ -3
CHMP4BQ9H444 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.67□□□□□ -3
CHMP4BQ9H444 RNU6-106P-201ENST00000384405 107 ntBASIC-3.67□□□□□ -3
CHMP4BQ9H444 MIR579-201ENST00000385221 98 ntBASIC-3.67□□□□□ -3
CHMP4BQ9H444 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.67□□□□□ -3
CHMP4BQ9H444 RNU6-162P-201ENST00000516228 103 ntBASIC-3.67□□□□□ -3
CHMP4BQ9H444 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.68□□□□□ -3
CHMP4BQ9H444 RNU6-974P-201ENST00000384099 108 ntBASIC-3.68□□□□□ -3
CHMP4BQ9H444 MIR548V-201ENST00000584165 80 ntBASIC-3.68□□□□□ -3
CHMP4BQ9H444 AL731768.1-201ENST00000603124 139 ntBASIC-3.68□□□□□ -3
CHMP4BQ9H444 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.68□□□□□ -3
CHMP4BQ9H444 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.69□□□□□ -3
CHMP4BQ9H444 RNU6-738P-201ENST00000384531 106 ntBASIC-3.69□□□□□ -3
CHMP4BQ9H444 SNORA40-201ENST00000388090 126 ntBASIC-3.69□□□□□ -3
CHMP4BQ9H444 RNA5SP106-201ENST00000517274 100 ntBASIC-3.69□□□□□ -3
CHMP4BQ9H444 MIR3675-201ENST00000583661 73 ntBASIC-3.69□□□□□ -3
CHMP4BQ9H444 SNORA27.2-201ENST00000363365 126 ntBASIC-3.7□□□□□ -3
CHMP4BQ9H444 RNU6-669P-201ENST00000365575 107 ntBASIC-3.7□□□□□ -3
CHMP4BQ9H444 RNU6-912P-201ENST00000363800 104 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 RNU6-200P-201ENST00000364743 107 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.71□□□□□ -3
CHMP4BQ9H444 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 RNU6-530P-201ENST00000391180 107 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 RNU6-982P-201ENST00000516216 102 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 RNU6-971P-201ENST00000516920 106 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 U6.95-201ENST00000636931 70 ntBASIC-3.71□□□□□ -3
CHMP4BQ9H444 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.72□□□□□ -3
CHMP4BQ9H444 RNU6-604P-201ENST00000390917 100 ntBASIC-3.72□□□□□ -3
CHMP4BQ9H444 U7.3-201ENST00000616123 62 ntBASIC-3.72□□□□□ -3
CHMP4BQ9H444 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.73□□□□□ -3.01
CHMP4BQ9H444 RNU7-151P-201ENST00000516930 53 ntBASIC-3.73□□□□□ -3.01
CHMP4BQ9H444 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.73□□□□□ -3.01
CHMP4BQ9H444 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.74□□□□□ -3.01
CHMP4BQ9H444 MTND5P41-201ENST00000517498 206 ntBASIC-3.74□□□□□ -3.01
CHMP4BQ9H444 AC004792.1-201ENST00000614523 137 ntBASIC-3.74□□□□□ -3.01
CHMP4BQ9H444 RNU6-330P-201ENST00000363015 107 ntBASIC-3.75□□□□□ -3.01
CHMP4BQ9H444 SNORD115-37-201ENST00000363768 82 ntBASIC-3.75□□□□□ -3.01
CHMP4BQ9H444 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.75□□□□□ -3.01
CHMP4BQ9H444 RNU6-800P-201ENST00000384473 103 ntBASIC-3.75□□□□□ -3.01
CHMP4BQ9H444 MIR630-201ENST00000384957 97 ntBASIC-3.75□□□□□ -3.01
CHMP4BQ9H444 SNORD1B-201ENST00000363091 84 ntBASIC-3.76□□□□□ -3.01
CHMP4BQ9H444 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.76□□□□□ -3.01
CHMP4BQ9H444 RNY1P1-201ENST00000364372 112 ntBASIC-3.76□□□□□ -3.01
CHMP4BQ9H444 RNY4P10-201ENST00000365571 96 ntBASIC-3.76□□□□□ -3.01
CHMP4BQ9H444 SNORA8.1-201ENST00000384250 140 ntBASIC-3.76□□□□□ -3.01
CHMP4BQ9H444 MIR590-201ENST00000385008 97 ntBASIC-3.76□□□□□ -3.01
CHMP4BQ9H444 MIR1254-1-201ENST00000408257 97 ntBASIC-3.77□□□□□ -3.01
CHMP4BQ9H444 RNU6-257P-201ENST00000410238 98 ntBASIC-3.77□□□□□ -3.01
CHMP4BQ9H444 RNU6-68P-201ENST00000516576 104 ntBASIC-3.77□□□□□ -3.01
CHMP4BQ9H444 SNORD113-2-201ENST00000391082 72 ntBASIC-3.78□□□□□ -3.01
CHMP4BQ9H444 RNU6-834P-201ENST00000362367 110 ntBASIC-3.79□□□□□ -3.02
CHMP4BQ9H444 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.79□□□□□ -3.02
CHMP4BQ9H444 MIR202-201ENST00000362219 110 ntBASIC-3.8□□□□□ -3.02
CHMP4BQ9H444 SNORD45.1-201ENST00000363181 77 ntBASIC-3.81□□□□□ -3.02
CHMP4BQ9H444 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.82□□□□□ -3.02
CHMP4BQ9H444 SNORD116-16-201ENST00000384533 92 ntBASIC-3.82□□□□□ -3.02
CHMP4BQ9H444 MIR548N-201ENST00000408742 75 ntBASIC-3.82□□□□□ -3.02
CHMP4BQ9H444 RNU6-523P-201ENST00000516304 54 ntBASIC-3.82□□□□□ -3.02
CHMP4BQ9H444 RNU6-303P-201ENST00000517091 106 ntBASIC-3.82□□□□□ -3.02
CHMP4BQ9H444 RNU6-624P-201ENST00000363411 107 ntBASIC-3.83□□□□□ -3.02
CHMP4BQ9H444 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.83□□□□□ -3.02
CHMP4BQ9H444 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.83□□□□□ -3.02
CHMP4BQ9H444 SNORA41B-201ENST00000384785 128 ntBASIC-3.84□□□□□ -3.02
CHMP4BQ9H444 MIR4503-201ENST00000582187 83 ntBASIC-3.84□□□□□ -3.02
CHMP4BQ9H444 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.85□□□□□ -3.03
CHMP4BQ9H444 RNU6-797P-201ENST00000363101 109 ntBASIC-3.85□□□□□ -3.03
CHMP4BQ9H444 SNORD114-13-201ENST00000364377 74 ntBASIC-3.85□□□□□ -3.03
CHMP4BQ9H444 RNU6-867P-201ENST00000364956 107 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 RNU6-649P-201ENST00000384463 107 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 SNORD116-21-201ENST00000384507 92 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 MIR1302-5-201ENST00000408164 150 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 MTATP8P2-201ENST00000435212 202 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 MTND4LP1-201ENST00000446263 157 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 MIR7978-201ENST00000636158 59 ntBASIC-3.86□□□□□ -3.03
CHMP4BQ9H444 RNU6-987P-201ENST00000384759 104 ntBASIC-3.87□□□□□ -3.03
CHMP4BQ9H444 RNU6-182P-201ENST00000516970 105 ntBASIC-3.87□□□□□ -3.03
CHMP4BQ9H444 RNU6-633P-201ENST00000362612 103 ntBASIC-3.88□□□□□ -3.03
CHMP4BQ9H444 SNORA63-201ENST00000363450 132 ntBASIC-3.88□□□□□ -3.03
CHMP4BQ9H444 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.88□□□□□ -3.03
CHMP4BQ9H444 RNU6-109P-201ENST00000516364 107 ntBASIC-3.88□□□□□ -3.03
CHMP4BQ9H444 RNU6-184P-201ENST00000516514 107 ntBASIC-3.88□□□□□ -3.03
CHMP4BQ9H444 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.89□□□□□ -3.03
CHMP4BQ9H444 RNU6-659P-201ENST00000516454 104 ntBASIC-3.89□□□□□ -3.03
CHMP4BQ9H444 RNA5SP215-201ENST00000363440 122 ntBASIC-3.9□□□□□ -3.03
CHMP4BQ9H444 AL353621.2-201ENST00000605340 133 ntBASIC-3.9□□□□□ -3.03
CHMP4BQ9H444 RNU6-172P-201ENST00000411000 93 ntBASIC-3.91□□□□□ -3.04
CHMP4BQ9H444 AC093729.1-201ENST00000513074 128 ntBASIC-3.91□□□□□ -3.04
CHMP4BQ9H444 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.91□□□□□ -3.04
CHMP4BQ9H444 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.92□□□□□ -3.04
CHMP4BQ9H444 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.92□□□□□ -3.04
CHMP4BQ9H444 SNORD60-201ENST00000383903 83 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 RNU6-196P-201ENST00000384315 107 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 RNU6-520P-201ENST00000384717 104 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 MIR125B1-201ENST00000385236 88 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 AC074348.1-201ENST00000426503 132 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 RNU6-557P-201ENST00000516842 110 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 AL359920.1-201ENST00000618332 176 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.93□□□□□ -3.04
CHMP4BQ9H444 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.94□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms