Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 MIR630-201ENST00000384957 97 ntBASIC-1.7□□□□□ -2.68
SDF4Q9BRK5 SNORD113-2-201ENST00000391082 72 ntBASIC-1.7□□□□□ -2.68
SDF4Q9BRK5 RNU6-267P-201ENST00000516714 103 ntBASIC-1.7□□□□□ -2.68
SDF4Q9BRK5 MIR1246-201ENST00000636535 73 ntBASIC-1.7□□□□□ -2.68
SDF4Q9BRK5 MIR4320-201ENST00000636981 65 ntBASIC-1.7□□□□□ -2.68
SDF4Q9BRK5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.71□□□□□ -2.68
SDF4Q9BRK5 RNU6-686P-201ENST00000364839 107 ntBASIC-1.71□□□□□ -2.68
SDF4Q9BRK5 AL606753.1-201ENST00000427435 87 ntBASIC-1.72□□□□□ -2.68
SDF4Q9BRK5 AC108019.1-201ENST00000512540 175 ntBASIC-1.72□□□□□ -2.68
SDF4Q9BRK5 MIR3123-201ENST00000583417 75 ntBASIC-1.72□□□□□ -2.68
SDF4Q9BRK5 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.73□□□□□ -2.69
SDF4Q9BRK5 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.73□□□□□ -2.69
SDF4Q9BRK5 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.74□□□□□ -2.69
SDF4Q9BRK5 RNU6-640P-201ENST00000363693 105 ntBASIC-1.74□□□□□ -2.69
SDF4Q9BRK5 SNORD116-16-201ENST00000384533 92 ntBASIC-1.74□□□□□ -2.69
SDF4Q9BRK5 SNORA41B-201ENST00000384785 128 ntBASIC-1.74□□□□□ -2.69
SDF4Q9BRK5 MIR548AA1-201ENST00000384971 97 ntBASIC-1.74□□□□□ -2.69
SDF4Q9BRK5 AL603908.1-201ENST00000406098 201 ntBASIC-1.74□□□□□ -2.69
SDF4Q9BRK5 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.75□□□□□ -2.69
SDF4Q9BRK5 RNU6-675P-201ENST00000384236 104 ntBASIC-1.75□□□□□ -2.69
SDF4Q9BRK5 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.75□□□□□ -2.69
SDF4Q9BRK5 RNU6-983P-201ENST00000516004 103 ntBASIC-1.75□□□□□ -2.69
SDF4Q9BRK5 RNA5SP180-201ENST00000516181 101 ntBASIC-1.75□□□□□ -2.69
SDF4Q9BRK5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.75□□□□□ -2.69
SDF4Q9BRK5 SNORD1B-201ENST00000363091 84 ntBASIC-1.76□□□□□ -2.69
SDF4Q9BRK5 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.76□□□□□ -2.69
SDF4Q9BRK5 MIR488-201ENST00000365739 83 ntBASIC-1.76□□□□□ -2.69
SDF4Q9BRK5 RNU6-841P-201ENST00000383872 107 ntBASIC-1.76□□□□□ -2.69
SDF4Q9BRK5 MIR4756-201ENST00000577874 78 ntBASIC-1.76□□□□□ -2.69
SDF4Q9BRK5 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.76□□□□□ -2.69
SDF4Q9BRK5 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 RNA5SP215-201ENST00000363440 122 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 RNU6-215P-201ENST00000365169 102 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 RNU6-147P-201ENST00000383983 107 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 RNU6-129P-201ENST00000391022 107 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 RNU6-919P-201ENST00000516731 104 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 MIR548AM-201ENST00000584298 74 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 AC013734.1-201ENST00000619329 111 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.77□□□□□ -2.69
SDF4Q9BRK5 MIR4484-201ENST00000582855 83 ntBASIC-1.78□□□□□ -2.69
SDF4Q9BRK5 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.78□□□□□ -2.69
SDF4Q9BRK5 SNORD113.1-201ENST00000363280 73 ntBASIC-1.79□□□□□ -2.7
SDF4Q9BRK5 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
SDF4Q9BRK5 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.79□□□□□ -2.7
SDF4Q9BRK5 AC005520.4-201ENST00000604337 90 ntBASIC-1.79□□□□□ -2.7
SDF4Q9BRK5 SNORA63.4-201ENST00000362763 126 ntBASIC-1.8□□□□□ -2.7
SDF4Q9BRK5 RNU7-151P-201ENST00000516930 53 ntBASIC-1.8□□□□□ -2.7
SDF4Q9BRK5 RNU6-789P-201ENST00000517105 102 ntBASIC-1.8□□□□□ -2.7
SDF4Q9BRK5 RNU6-844P-201ENST00000517175 102 ntBASIC-1.8□□□□□ -2.7
SDF4Q9BRK5 AC006160.2-201ENST00000637708 154 ntBASIC-1.8□□□□□ -2.7
SDF4Q9BRK5 RNU6-247P-201ENST00000362636 107 ntBASIC-1.81□□□□□ -2.7
SDF4Q9BRK5 RNU6-668P-201ENST00000364180 107 ntBASIC-1.81□□□□□ -2.7
SDF4Q9BRK5 MIR1297-201ENST00000637311 77 ntBASIC-1.81□□□□□ -2.7
SDF4Q9BRK5 SNORD20-201ENST00000384550 80 ntBASIC-1.82□□□□□ -2.7
SDF4Q9BRK5 MIR664A-201ENST00000626086 82 ntBASIC-1.82□□□□□ -2.7
SDF4Q9BRK5 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.83□□□□□ -2.7
SDF4Q9BRK5 RNU6-669P-201ENST00000365575 107 ntBASIC-1.83□□□□□ -2.7
SDF4Q9BRK5 SNORD45A-201ENST00000384512 84 ntBASIC-1.83□□□□□ -2.7
SDF4Q9BRK5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
SDF4Q9BRK5 MIR664B-201ENST00000626756 61 ntBASIC-1.83□□□□□ -2.7
SDF4Q9BRK5 MIR7978-201ENST00000636158 59 ntBASIC-1.83□□□□□ -2.7
SDF4Q9BRK5 SNORA27.2-201ENST00000363365 126 ntBASIC-1.84□□□□□ -2.7
SDF4Q9BRK5 MIR579-201ENST00000385221 98 ntBASIC-1.84□□□□□ -2.7
SDF4Q9BRK5 RNU6-380P-201ENST00000410207 107 ntBASIC-1.84□□□□□ -2.7
SDF4Q9BRK5 RNU4-88P-201ENST00000411220 86 ntBASIC-1.84□□□□□ -2.7
SDF4Q9BRK5 MIR8053-201ENST00000613344 75 ntBASIC-1.84□□□□□ -2.7
SDF4Q9BRK5 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.85□□□□□ -2.71
SDF4Q9BRK5 SNORD63.2-201ENST00000516303 64 ntBASIC-1.85□□□□□ -2.71
SDF4Q9BRK5 RNU6-974P-201ENST00000384099 108 ntBASIC-1.86□□□□□ -2.71
SDF4Q9BRK5 U6.97-201ENST00000636904 101 ntBASIC-1.86□□□□□ -2.71
SDF4Q9BRK5 SNORD115-31-201ENST00000365318 82 ntBASIC-1.87□□□□□ -2.71
SDF4Q9BRK5 RNU6-995P-201ENST00000391244 107 ntBASIC-1.87□□□□□ -2.71
SDF4Q9BRK5 RNY3P8-201ENST00000411366 126 ntBASIC-1.87□□□□□ -2.71
SDF4Q9BRK5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.87□□□□□ -2.71
SDF4Q9BRK5 RNU6-980P-201ENST00000516925 103 ntBASIC-1.87□□□□□ -2.71
SDF4Q9BRK5 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.87□□□□□ -2.71
SDF4Q9BRK5 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 MIR125B1-201ENST00000385236 88 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 RNU6-172P-201ENST00000411000 93 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 SNX3P1X-201ENST00000414887 175 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 RNU6-523P-201ENST00000516304 54 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 MIR548W-201ENST00000581970 74 ntBASIC-1.88□□□□□ -2.71
SDF4Q9BRK5 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.89□□□□□ -2.71
SDF4Q9BRK5 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.89□□□□□ -2.71
SDF4Q9BRK5 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.89□□□□□ -2.71
SDF4Q9BRK5 MIR1285-2-201ENST00000408311 88 ntBASIC-1.89□□□□□ -2.71
SDF4Q9BRK5 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.89□□□□□ -2.71
SDF4Q9BRK5 RNA5SP173-201ENST00000364857 136 ntBASIC-1.9□□□□□ -2.71
SDF4Q9BRK5 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.9□□□□□ -2.71
SDF4Q9BRK5 SNORD116-24-201ENST00000384549 92 ntBASIC-1.9□□□□□ -2.71
SDF4Q9BRK5 RNU6-406P-201ENST00000516470 107 ntBASIC-1.9□□□□□ -2.71
SDF4Q9BRK5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
SDF4Q9BRK5 snoU13.10-201ENST00000459301 103 ntBASIC-1.91□□□□□ -2.72
SDF4Q9BRK5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.91□□□□□ -2.72
SDF4Q9BRK5 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.92□□□□□ -2.72
SDF4Q9BRK5 MIR1468-201ENST00000410600 86 ntBASIC-1.92□□□□□ -2.72
SDF4Q9BRK5 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms