Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
CDX2Q99626 SNORD75.1-201ENST00000408373 60 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 RNU6-380P-201ENST00000410207 107 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 SNORD63.1-201ENST00000516178 80 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 MIR8053-201ENST00000613344 75 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 U2.18-201ENST00000622185 84 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 RNU6-698P-201ENST00000363523 107 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 SNORD114-25-201ENST00000363742 72 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 RNU6-34P-201ENST00000364874 107 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 SNORD14C-201ENST00000365382 88 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 SNORA62.4-201ENST00000365504 151 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 RNU6-458P-201ENST00000384179 107 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 RNU6-634P-201ENST00000459134 106 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 U6.58-201ENST00000613107 107 ntBASIC-0.29□□□□□ -2.46
CDX2Q99626 RNU6-776P-201ENST00000364403 104 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 RNU6-895P-201ENST00000384125 103 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 MTND4LP1-201ENST00000446263 157 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 AL500527.2-201ENST00000454105 95 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.3□□□□□ -2.46
CDX2Q99626 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.31□□□□□ -2.46
CDX2Q99626 MIR527-201ENST00000385244 85 ntBASIC-0.31□□□□□ -2.46
CDX2Q99626 SNORD64-201ENST00000386683 67 ntBASIC-0.31□□□□□ -2.46
CDX2Q99626 RNU6-663P-201ENST00000391105 106 ntBASIC-0.31□□□□□ -2.46
CDX2Q99626 RNU6-630P-201ENST00000391258 106 ntBASIC-0.31□□□□□ -2.46
CDX2Q99626 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.31□□□□□ -2.46
CDX2Q99626 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 RNU7-134P-201ENST00000458997 64 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 AC005520.4-201ENST00000604337 90 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 MIR548AZ-201ENST00000616567 95 ntBASIC-0.32□□□□□ -2.46
CDX2Q99626 SNORD114-14-201ENST00000362723 75 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 SNORD74.6-201ENST00000364796 70 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 MIR520D-201ENST00000385002 87 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 SNORD30.1-201ENST00000391309 70 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 RNU4-63P-201ENST00000411313 118 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 RNU6-732P-201ENST00000516033 103 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 MIR198-201ENST00000637333 62 ntBASIC-0.33□□□□□ -2.46
CDX2Q99626 SNORD1B-201ENST00000363091 84 ntBASIC-0.34□□□□□ -2.46
CDX2Q99626 RNA5SP215-201ENST00000363440 122 ntBASIC-0.34□□□□□ -2.46
CDX2Q99626 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.34□□□□□ -2.46
CDX2Q99626 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.34□□□□□ -2.46
CDX2Q99626 RPL35AP4-201ENST00000412007 102 ntBASIC-0.34□□□□□ -2.46
CDX2Q99626 SNORD60.1-201ENST00000362451 73 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 RNU6-924P-201ENST00000362926 108 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 SNORD116-16-201ENST00000384533 92 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 MIR147A-201ENST00000385079 72 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 MIR579-201ENST00000385221 98 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 RNU6-258P-201ENST00000390884 101 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 SNORA72.7-201ENST00000516349 94 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 U6.111-201ENST00000636093 83 ntBASIC-0.35□□□□□ -2.47
CDX2Q99626 RNA5SP26-201ENST00000362406 119 ntBASIC-0.36□□□□□ -2.47
CDX2Q99626 RNA5SP192-201ENST00000364404 120 ntBASIC-0.36□□□□□ -2.47
CDX2Q99626 RNU6-974P-201ENST00000384099 108 ntBASIC-0.36□□□□□ -2.47
CDX2Q99626 SNORA26.4-201ENST00000391188 123 ntBASIC-0.36□□□□□ -2.47
CDX2Q99626 MIR382-201ENST00000637119 76 ntBASIC-0.36□□□□□ -2.47
CDX2Q99626 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.37□□□□□ -2.47
CDX2Q99626 RNU6-649P-201ENST00000384463 107 ntBASIC-0.37□□□□□ -2.47
CDX2Q99626 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
CDX2Q99626 MIR601-201ENST00000385256 79 ntBASIC-0.37□□□□□ -2.47
CDX2Q99626 AC021146.6-201ENST00000514659 117 ntBASIC-0.37□□□□□ -2.47
CDX2Q99626 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 RNU6-800P-201ENST00000384473 103 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 RNU6-696P-201ENST00000390834 107 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 SNORA13-201ENST00000458790 133 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 RNU6-542P-201ENST00000516405 103 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 MIR3681-201ENST00000580089 72 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 RNU6-92P-201ENST00000605893 104 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 MIR4662A-201ENST00000637499 67 ntBASIC-0.38□□□□□ -2.47
CDX2Q99626 SNORA25.4-201ENST00000363666 124 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 SNORD115-33-201ENST00000363723 82 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 RNU6-608P-201ENST00000383927 104 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 MIR196A1-201ENST00000388006 70 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 MIR548Q-201ENST00000408404 100 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 RNU6-172P-201ENST00000411000 93 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 RNU6-638P-201ENST00000516582 104 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 RNU7-151P-201ENST00000516930 53 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 MIR7978-201ENST00000636158 59 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 MIR5683-201ENST00000636514 76 ntBASIC-0.39□□□□□ -2.47
CDX2Q99626 MIR507-201ENST00000385234 94 ntBASIC-0.4□□□□□ -2.47
CDX2Q99626 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.4□□□□□ -2.47
CDX2Q99626 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.4□□□□□ -2.47
CDX2Q99626 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.4□□□□□ -2.47
CDX2Q99626 SNORA25.5-201ENST00000363782 126 ntBASIC-0.41□□□□□ -2.48
CDX2Q99626 MIR3170-201ENST00000582699 77 ntBASIC-0.41□□□□□ -2.48
CDX2Q99626 MIR4511-201ENST00000582784 87 ntBASIC-0.41□□□□□ -2.48
CDX2Q99626 AL353691.2-201ENST00000443795 59 ntBASIC-0.42□□□□□ -2.48
CDX2Q99626 AC090616.4-201ENST00000448026 115 ntBASIC-0.42□□□□□ -2.48
CDX2Q99626 AC114801.3-201ENST00000510231 177 ntBASIC-0.42□□□□□ -2.48
CDX2Q99626 RNU6-539P-201ENST00000516665 103 ntBASIC-0.42□□□□□ -2.48
CDX2Q99626 MIR4490-201ENST00000582647 84 ntBASIC-0.42□□□□□ -2.48
CDX2Q99626 MIR4499-201ENST00000584834 69 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms