Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU4-61P-201ENST00000411243 107 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 RNU6-542P-201ENST00000516405 103 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 MIR664A-201ENST00000626086 82 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 SNORD45A-201ENST00000384512 84 ntBASIC-1.09□□□□□ -2.58
SCN2AQ99250 uc_338.19-201ENST00000616808 99 ntBASIC-1.09□□□□□ -2.58
SCN2AQ99250 U2.22-201ENST00000636441 106 ntBASIC-1.09□□□□□ -2.58
SCN2AQ99250 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 MIR4441-201ENST00000582623 100 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 MIR548V-201ENST00000584165 80 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 MIR147A-201ENST00000385079 72 ntBASIC-1.1□□□□□ -2.59
SCN2AQ99250 MIR5588-201ENST00000581890 63 ntBASIC-1.1□□□□□ -2.59
SCN2AQ99250 U4.2-201ENST00000618561 85 ntBASIC-1.1□□□□□ -2.59
SCN2AQ99250 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 AC018880.2-201ENST00000414265 201 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 RNU6-330P-201ENST00000363015 107 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 MIR548Q-201ENST00000408404 100 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
SCN2AQ99250 RNU6-587P-201ENST00000391282 106 ntBASIC-1.13□□□□□ -2.59
SCN2AQ99250 AL500527.2-201ENST00000454105 95 ntBASIC-1.13□□□□□ -2.59
SCN2AQ99250 MIR4666B-201ENST00000578142 81 ntBASIC-1.13□□□□□ -2.59
SCN2AQ99250 RNA5SP173-201ENST00000364857 136 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 RNU6-604P-201ENST00000390917 100 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 MIR1245B-201ENST00000636115 69 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 SNORD113-2-201ENST00000391082 72 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 MIR548AG1-201ENST00000579932 66 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 SNORD116-16-201ENST00000384533 92 ntBASIC-1.16□□□□□ -2.59
SCN2AQ99250 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.16□□□□□ -2.59
SCN2AQ99250 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.16□□□□□ -2.59
SCN2AQ99250 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.16□□□□□ -2.6
SCN2AQ99250 MIR507-201ENST00000385234 94 ntBASIC-1.16□□□□□ -2.6
SCN2AQ99250 RNU7-134P-201ENST00000458997 64 ntBASIC-1.16□□□□□ -2.6
SCN2AQ99250 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 MIR548AA1-201ENST00000384971 97 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 SNORD19-201ENST00000391191 68 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 MIR5591-201ENST00000578248 65 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 RNU6-820P-201ENST00000384273 107 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.18□□□□□ -2.6
SCN2AQ99250 IGLL4P-201ENST00000614590 133 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 MIR548C-201ENST00000384815 97 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 RNU6-630P-201ENST00000391258 106 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 MIR5582-201ENST00000579697 68 ntBASIC-1.19□□□□□ -2.6
SCN2AQ99250 MIR4712-201ENST00000583750 82 ntBASIC-1.19□□□□□ -2.6
SCN2AQ99250 SNORD1B-201ENST00000363091 84 ntBASIC-1.2□□□□□ -2.6
SCN2AQ99250 RNU6-668P-201ENST00000364180 107 ntBASIC-1.2□□□□□ -2.6
SCN2AQ99250 MIR4520-1-201ENST00000582609 70 ntBASIC-1.2□□□□□ -2.6
SCN2AQ99250 RNU6-164P-201ENST00000364604 103 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 RNU6-787P-201ENST00000384032 107 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 MIR5683-201ENST00000636514 76 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.22□□□□□ -2.6
SCN2AQ99250 MIR1255A-201ENST00000408338 113 ntBASIC-1.22□□□□□ -2.6
SCN2AQ99250 RNU7-151P-201ENST00000516930 53 ntBASIC-1.22□□□□□ -2.6
SCN2AQ99250 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.23□□□□□ -2.61
SCN2AQ99250 RNU6-226P-201ENST00000363778 107 ntBASIC-1.23□□□□□ -2.61
SCN2AQ99250 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.23□□□□□ -2.61
SCN2AQ99250 RNU6-732P-201ENST00000516033 103 ntBASIC-1.24□□□□□ -2.61
SCN2AQ99250 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 MIR8485-201ENST00000401372 91 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 U2.18-201ENST00000622185 84 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 MIR889-201ENST00000401280 79 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 MIR4484-201ENST00000582855 83 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.26□□□□□ -2.61
SCN2AQ99250 MIR1246-201ENST00000636535 73 ntBASIC-1.26□□□□□ -2.61
SCN2AQ99250 MIR494-201ENST00000349529 81 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 RNU6-247P-201ENST00000362636 107 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 SNORA25.5-201ENST00000363782 126 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 RNU6-663P-201ENST00000391105 106 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 SNORA41B-201ENST00000384785 128 ntBASIC-1.28□□□□□ -2.61
SCN2AQ99250 RNU6-940P-201ENST00000363433 104 ntBASIC-1.28□□□□□ -2.62
SCN2AQ99250 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.62
SCN2AQ99250 MIR3202-2-201ENST00000635980 79 ntBASIC-1.28□□□□□ -2.62
SCN2AQ99250 SNORD115-31-201ENST00000365318 82 ntBASIC-1.29□□□□□ -2.62
SCN2AQ99250 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 RNU6-119P-201ENST00000364882 107 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 RNU6-279P-201ENST00000391297 101 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 AC120024.2-201ENST00000576526 175 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 MIR3170-201ENST00000582699 77 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 AC005520.4-201ENST00000604337 90 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 RNA5SP26-201ENST00000362406 119 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 AC090616.4-201ENST00000448026 115 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 RNA5SP180-201ENST00000516181 101 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 AC062037.1-201ENST00000605302 128 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 U7.4-201ENST00000614961 63 ntBASIC-1.32□□□□□ -2.62
SCN2AQ99250 SNORD60.1-201ENST00000362451 73 ntBASIC-1.32□□□□□ -2.62
SCN2AQ99250 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.33□□□□□ -2.62
SCN2AQ99250 RNY4P27-201ENST00000363341 96 ntBASIC-1.33□□□□□ -2.62
SCN2AQ99250 RNU6-92P-201ENST00000605893 104 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms