Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-983P-201ENST00000516004 103 ntBASIC-2.16□□□□□ -2.76
NIPAL3Q6P499 RNU6-668P-201ENST00000364180 107 ntBASIC-2.17□□□□□ -2.76
NIPAL3Q6P499 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.17□□□□□ -2.76
NIPAL3Q6P499 RNU6-630P-201ENST00000391258 106 ntBASIC-2.17□□□□□ -2.76
NIPAL3Q6P499 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.17□□□□□ -2.76
NIPAL3Q6P499 RNA5SP215-201ENST00000363440 122 ntBASIC-2.18□□□□□ -2.76
NIPAL3Q6P499 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.18□□□□□ -2.76
NIPAL3Q6P499 RNU6-755P-201ENST00000364400 103 ntBASIC-2.18□□□□□ -2.76
NIPAL3Q6P499 RNU6-675P-201ENST00000384236 104 ntBASIC-2.18□□□□□ -2.76
NIPAL3Q6P499 RNU6-844P-201ENST00000517175 102 ntBASIC-2.18□□□□□ -2.76
NIPAL3Q6P499 MIR488-201ENST00000365739 83 ntBASIC-2.19□□□□□ -2.76
NIPAL3Q6P499 RNU6-598P-201ENST00000364017 105 ntBASIC-2.2□□□□□ -2.76
NIPAL3Q6P499 MIR630-201ENST00000384957 97 ntBASIC-2.2□□□□□ -2.76
NIPAL3Q6P499 SNORD113-2-201ENST00000391082 72 ntBASIC-2.2□□□□□ -2.76
NIPAL3Q6P499 MIR365A-201ENST00000362260 87 ntBASIC-2.22□□□□□ -2.76
NIPAL3Q6P499 RNA5SP173-201ENST00000364857 136 ntBASIC-2.22□□□□□ -2.76
NIPAL3Q6P499 MIR487B-201ENST00000385021 84 ntBASIC-2.22□□□□□ -2.76
NIPAL3Q6P499 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.22□□□□□ -2.76
NIPAL3Q6P499 SNORD113.1-201ENST00000363280 73 ntBASIC-2.23□□□□□ -2.77
NIPAL3Q6P499 RNU6-640P-201ENST00000363693 105 ntBASIC-2.23□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.23□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.23□□□□□ -2.77
NIPAL3Q6P499 MIR3910-1-201ENST00000580936 111 ntBASIC-2.23□□□□□ -2.77
NIPAL3Q6P499 U2.18-201ENST00000622185 84 ntBASIC-2.24□□□□□ -2.77
NIPAL3Q6P499 RNU6-228P-201ENST00000362700 106 ntBASIC-2.25□□□□□ -2.77
NIPAL3Q6P499 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.25□□□□□ -2.77
NIPAL3Q6P499 RNU6-608P-201ENST00000383927 104 ntBASIC-2.25□□□□□ -2.77
NIPAL3Q6P499 RNU6-400P-201ENST00000391173 106 ntBASIC-2.25□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.25□□□□□ -2.77
NIPAL3Q6P499 MIR23C-201ENST00000579846 100 ntBASIC-2.25□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 RNU6-315P-201ENST00000362666 107 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 SNORA63.4-201ENST00000362763 126 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 MIR4441-201ENST00000582623 100 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.26□□□□□ -2.77
NIPAL3Q6P499 SNORD45A-201ENST00000384512 84 ntBASIC-2.28□□□□□ -2.77
NIPAL3Q6P499 SNORD116-16-201ENST00000384533 92 ntBASIC-2.28□□□□□ -2.77
NIPAL3Q6P499 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.28□□□□□ -2.77
NIPAL3Q6P499 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 RNU6-147P-201ENST00000383983 107 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 MIR548AA1-201ENST00000384971 97 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 MIR520D-201ENST00000385002 87 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 AC108019.1-201ENST00000512540 175 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 IGLL4P-201ENST00000614590 133 ntBASIC-2.29□□□□□ -2.78
NIPAL3Q6P499 RNU6-79P-201ENST00000362511 107 ntBASIC-2.31□□□□□ -2.78
NIPAL3Q6P499 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.31□□□□□ -2.78
NIPAL3Q6P499 RNY1P1-201ENST00000364372 112 ntBASIC-2.32□□□□□ -2.78
NIPAL3Q6P499 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.33□□□□□ -2.78
NIPAL3Q6P499 MIR664A-201ENST00000626086 82 ntBASIC-2.33□□□□□ -2.78
NIPAL3Q6P499 RNU6-247P-201ENST00000362636 107 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 SNORD113-1-201ENST00000365321 69 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 MIR3170-201ENST00000582699 77 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 U4.2-201ENST00000618561 85 ntBASIC-2.34□□□□□ -2.78
NIPAL3Q6P499 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.36□□□□□ -2.79
NIPAL3Q6P499 RNU6-919P-201ENST00000516731 104 ntBASIC-2.36□□□□□ -2.79
NIPAL3Q6P499 MIR4756-201ENST00000577874 78 ntBASIC-2.36□□□□□ -2.79
NIPAL3Q6P499 SNORD114-3-201ENST00000364969 75 ntBASIC-2.37□□□□□ -2.79
NIPAL3Q6P499 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.37□□□□□ -2.79
NIPAL3Q6P499 RNU6-995P-201ENST00000391244 107 ntBASIC-2.37□□□□□ -2.79
NIPAL3Q6P499 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.37□□□□□ -2.79
NIPAL3Q6P499 MIR5588-201ENST00000581890 63 ntBASIC-2.37□□□□□ -2.79
NIPAL3Q6P499 SNORA41B-201ENST00000384785 128 ntBASIC-2.38□□□□□ -2.79
NIPAL3Q6P499 MIR664B-201ENST00000626756 61 ntBASIC-2.38□□□□□ -2.79
NIPAL3Q6P499 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.39□□□□□ -2.79
NIPAL3Q6P499 SNORD1B-201ENST00000363091 84 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 RNU6-215P-201ENST00000365169 102 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 RNU6-895P-201ENST00000384125 103 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 MIR154-201ENST00000385243 84 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 AL606753.1-201ENST00000427435 87 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 MIR4723-201ENST00000585070 81 ntBASIC-2.4□□□□□ -2.79
NIPAL3Q6P499 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.41□□□□□ -2.8
NIPAL3Q6P499 SNORD20-201ENST00000384550 80 ntBASIC-2.41□□□□□ -2.8
NIPAL3Q6P499 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.42□□□□□ -2.8
NIPAL3Q6P499 RNU6-979P-201ENST00000383896 107 ntBASIC-2.42□□□□□ -2.8
NIPAL3Q6P499 RNU6-695P-201ENST00000391157 104 ntBASIC-2.42□□□□□ -2.8
NIPAL3Q6P499 RNU6-70P-201ENST00000516438 60 ntBASIC-2.43□□□□□ -2.8
NIPAL3Q6P499 AC120024.2-201ENST00000576526 175 ntBASIC-2.43□□□□□ -2.8
NIPAL3Q6P499 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.43□□□□□ -2.8
NIPAL3Q6P499 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.44□□□□□ -2.8
NIPAL3Q6P499 RNU6-49P-201ENST00000384256 107 ntBASIC-2.45□□□□□ -2.8
NIPAL3Q6P499 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.46□□□□□ -2.8
NIPAL3Q6P499 MIR1245B-201ENST00000636115 69 ntBASIC-2.46□□□□□ -2.8
NIPAL3Q6P499 RNU7-151P-201ENST00000516930 53 ntBASIC-2.47□□□□□ -2.8
NIPAL3Q6P499 MIR4712-201ENST00000583750 82 ntBASIC-2.47□□□□□ -2.8
NIPAL3Q6P499 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.47□□□□□ -2.8
NIPAL3Q6P499 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.47□□□□□ -2.8
NIPAL3Q6P499 RNU6-841P-201ENST00000383872 107 ntBASIC-2.48□□□□□ -2.81
NIPAL3Q6P499 RNU7-171P-201ENST00000459581 62 ntBASIC-2.48□□□□□ -2.81
NIPAL3Q6P499 RNU6-172P-201ENST00000411000 93 ntBASIC-2.49□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms