Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
RNFT1Q5M7Z0 MIR103A1-201ENST00000362165 78 ntBASIC0.65□□□□□ -2.31
RNFT1Q5M7Z0 RNY3P8-201ENST00000411366 126 ntBASIC0.65□□□□□ -2.31
RNFT1Q5M7Z0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RNFT1Q5M7Z0 RNU6-608P-201ENST00000383927 104 ntBASIC0.64□□□□□ -2.31
RNFT1Q5M7Z0 SNORA68.3-201ENST00000515906 83 ntBASIC0.64□□□□□ -2.31
RNFT1Q5M7Z0 AP002795.1-201ENST00000534879 84 ntBASIC0.64□□□□□ -2.31
RNFT1Q5M7Z0 MIR5683-201ENST00000636514 76 ntBASIC0.64□□□□□ -2.31
RNFT1Q5M7Z0 MIR193B-201ENST00000384907 83 ntBASIC0.63□□□□□ -2.31
RNFT1Q5M7Z0 MIR892B-201ENST00000401279 77 ntBASIC0.63□□□□□ -2.31
RNFT1Q5M7Z0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.63□□□□□ -2.31
RNFT1Q5M7Z0 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
RNFT1Q5M7Z0 RNU6-815P-201ENST00000384080 113 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 MIR643-201ENST00000385267 97 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 SNORA26.4-201ENST00000391188 123 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 MIR548H2-201ENST00000408874 88 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 RNA5SP163-201ENST00000410304 99 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 AL353691.2-201ENST00000443795 59 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 MIR1273G-201ENST00000577677 100 ntBASIC0.62□□□□□ -2.31
RNFT1Q5M7Z0 MIRLET7D-201ENST00000362263 87 ntBASIC0.61□□□□□ -2.31
RNFT1Q5M7Z0 SNORD60-201ENST00000383903 83 ntBASIC0.61□□□□□ -2.31
RNFT1Q5M7Z0 AC010487.4-201ENST00000637027 61 ntBASIC0.6□□□□□ -2.31
RNFT1Q5M7Z0 RNA5SP62-201ENST00000363457 110 ntBASIC0.59□□□□□ -2.31
RNFT1Q5M7Z0 SNORD114-23-201ENST00000363536 72 ntBASIC0.59□□□□□ -2.31
RNFT1Q5M7Z0 SNORD115-33-201ENST00000363723 82 ntBASIC0.59□□□□□ -2.31
RNFT1Q5M7Z0 AC069113.3-201ENST00000521019 150 ntBASIC0.59□□□□□ -2.31
RNFT1Q5M7Z0 RNA5SP457-201ENST00000363657 124 ntBASIC0.58□□□□□ -2.32
RNFT1Q5M7Z0 MIR936-201ENST00000401264 98 ntBASIC0.58□□□□□ -2.32
RNFT1Q5M7Z0 AC244250.2-201ENST00000418731 148 ntBASIC0.58□□□□□ -2.32
RNFT1Q5M7Z0 MIR924-201ENST00000638017 53 ntBASIC0.58□□□□□ -2.32
RNFT1Q5M7Z0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
RNFT1Q5M7Z0 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
RNFT1Q5M7Z0 SNORD74.6-201ENST00000364796 70 ntBASIC0.57□□□□□ -2.32
RNFT1Q5M7Z0 RNA5SP193-201ENST00000410353 107 ntBASIC0.57□□□□□ -2.32
RNFT1Q5M7Z0 MIR4743-201ENST00000584576 69 ntBASIC0.57□□□□□ -2.32
RNFT1Q5M7Z0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
RNFT1Q5M7Z0 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
RNFT1Q5M7Z0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RNFT1Q5M7Z0 MIR548N-201ENST00000408742 75 ntBASIC0.56□□□□□ -2.32
RNFT1Q5M7Z0 MIR4280-201ENST00000582178 76 ntBASIC0.56□□□□□ -2.32
RNFT1Q5M7Z0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
RNFT1Q5M7Z0 MIR655-201ENST00000362159 97 ntBASIC0.53□□□□□ -2.32
RNFT1Q5M7Z0 Y_RNA.374-201ENST00000365606 101 ntBASIC0.53□□□□□ -2.32
RNFT1Q5M7Z0 SNORD18.2-201ENST00000459604 70 ntBASIC0.53□□□□□ -2.32
RNFT1Q5M7Z0 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
RNFT1Q5M7Z0 MIR6851-201ENST00000617060 67 ntBASIC0.53□□□□□ -2.32
RNFT1Q5M7Z0 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
RNFT1Q5M7Z0 AL445193.1-201ENST00000441183 141 ntBASIC0.51□□□□□ -2.33
RNFT1Q5M7Z0 RNU7-165P-201ENST00000458864 60 ntBASIC0.51□□□□□ -2.33
RNFT1Q5M7Z0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.51□□□□□ -2.33
RNFT1Q5M7Z0 MIR610-201ENST00000385139 96 ntBASIC0.5□□□□□ -2.33
RNFT1Q5M7Z0 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
RNFT1Q5M7Z0 Y_RNA.129-201ENST00000363392 110 ntBASIC0.49□□□□□ -2.33
RNFT1Q5M7Z0 MIR23C-201ENST00000579846 100 ntBASIC0.49□□□□□ -2.33
RNFT1Q5M7Z0 MIR4315-1-201ENST00000636800 73 ntBASIC0.49□□□□□ -2.33
RNFT1Q5M7Z0 MIR4315-2-201ENST00000640925 73 ntBASIC0.49□□□□□ -2.33
RNFT1Q5M7Z0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.48□□□□□ -2.33
RNFT1Q5M7Z0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.48□□□□□ -2.33
RNFT1Q5M7Z0 MIR330-201ENST00000362196 94 ntBASIC0.47□□□□□ -2.33
RNFT1Q5M7Z0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.47□□□□□ -2.33
RNFT1Q5M7Z0 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
RNFT1Q5M7Z0 RNU7-159P-201ENST00000459284 62 ntBASIC0.47□□□□□ -2.33
RNFT1Q5M7Z0 SNORD38.3-201ENST00000516599 73 ntBASIC0.47□□□□□ -2.33
RNFT1Q5M7Z0 Y_RNA.382-201ENST00000365672 114 ntBASIC0.46□□□□□ -2.34
RNFT1Q5M7Z0 MIR593-201ENST00000384856 100 ntBASIC0.46□□□□□ -2.34
RNFT1Q5M7Z0 RPL35AP4-201ENST00000412007 102 ntBASIC0.46□□□□□ -2.34
RNFT1Q5M7Z0 MIR8087-201ENST00000612745 78 ntBASIC0.46□□□□□ -2.34
RNFT1Q5M7Z0 MIR518B-201ENST00000385127 83 ntBASIC0.44□□□□□ -2.34
RNFT1Q5M7Z0 RNA5SP330-201ENST00000517096 96 ntBASIC0.44□□□□□ -2.34
RNFT1Q5M7Z0 Y_RNA.134-201ENST00000363435 105 ntBASIC0.43□□□□□ -2.34
RNFT1Q5M7Z0 RNU6-46P-201ENST00000383860 107 ntBASIC0.43□□□□□ -2.34
RNFT1Q5M7Z0 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
RNFT1Q5M7Z0 MIR145-201ENST00000384967 88 ntBASIC0.43□□□□□ -2.34
RNFT1Q5M7Z0 Y_RNA.30-201ENST00000362572 97 ntBASIC0.42□□□□□ -2.34
RNFT1Q5M7Z0 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
RNFT1Q5M7Z0 SNORD22.1-201ENST00000516331 125 ntBASIC0.41□□□□□ -2.34
RNFT1Q5M7Z0 Y_RNA.68-201ENST00000362881 102 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 SNORD49B-201ENST00000365172 72 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 MIR581-201ENST00000384895 96 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 SNORD115.2-201ENST00000391126 59 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 SNORD75.1-201ENST00000408373 60 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 Y_RNA.603-201ENST00000410571 108 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 RNA5SP66-201ENST00000517178 101 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 AC013734.1-201ENST00000619329 111 ntBASIC0.4□□□□□ -2.35
RNFT1Q5M7Z0 RNA5SP257-201ENST00000363023 116 ntBASIC0.39□□□□□ -2.35
RNFT1Q5M7Z0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
RNFT1Q5M7Z0 RNU6-68P-201ENST00000516576 104 ntBASIC0.39□□□□□ -2.35
RNFT1Q5M7Z0 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
RNFT1Q5M7Z0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.39□□□□□ -2.35
RNFT1Q5M7Z0 Y_RNA.223-201ENST00000364290 113 ntBASIC0.38□□□□□ -2.35
RNFT1Q5M7Z0 SNORD114-17-201ENST00000364699 75 ntBASIC0.38□□□□□ -2.35
RNFT1Q5M7Z0 Y_RNA.320-201ENST00000365144 102 ntBASIC0.38□□□□□ -2.35
RNFT1Q5M7Z0 RNA5SP67-201ENST00000516422 131 ntBASIC0.38□□□□□ -2.35
RNFT1Q5M7Z0 MIR507-201ENST00000385234 94 ntBASIC0.37□□□□□ -2.35
RNFT1Q5M7Z0 AC093726.3-201ENST00000637588 150 ntBASIC0.37□□□□□ -2.35
RNFT1Q5M7Z0 MIR379-201ENST00000362218 67 ntBASIC0.36□□□□□ -2.35
RNFT1Q5M7Z0 Y_RNA.433-201ENST00000384089 102 ntBASIC0.36□□□□□ -2.35
RNFT1Q5M7Z0 SNORA13-201ENST00000458790 133 ntBASIC0.36□□□□□ -2.35
RNFT1Q5M7Z0 AL590491.3-201ENST00000610731 82 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms