Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MIR382-201ENST00000637119 76 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.47□□□□□ -2.64
CCDC38Q502W7 RNA5SP461-201ENST00000516451 104 ntBASIC-1.47□□□□□ -2.64
CCDC38Q502W7 snoU83B.1-201ENST00000517136 88 ntBASIC-1.47□□□□□ -2.64
CCDC38Q502W7 MIR3165-201ENST00000579874 75 ntBASIC-1.47□□□□□ -2.64
CCDC38Q502W7 MIR4723-201ENST00000585070 81 ntBASIC-1.47□□□□□ -2.64
CCDC38Q502W7 MIR429-201ENST00000362106 83 ntBASIC-1.48□□□□□ -2.65
CCDC38Q502W7 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.48□□□□□ -2.65
CCDC38Q502W7 RNA5SP170-201ENST00000517150 101 ntBASIC-1.48□□□□□ -2.65
CCDC38Q502W7 uc_338.19-201ENST00000616808 99 ntBASIC-1.48□□□□□ -2.65
CCDC38Q502W7 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.49□□□□□ -2.65
CCDC38Q502W7 AL353691.2-201ENST00000443795 59 ntBASIC-1.49□□□□□ -2.65
CCDC38Q502W7 RNU7-88P-201ENST00000458752 63 ntBASIC-1.49□□□□□ -2.65
CCDC38Q502W7 MIR548V-201ENST00000584165 80 ntBASIC-1.49□□□□□ -2.65
CCDC38Q502W7 AC062037.1-201ENST00000605302 128 ntBASIC-1.49□□□□□ -2.65
CCDC38Q502W7 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.5□□□□□ -2.65
CCDC38Q502W7 RNU6-458P-201ENST00000384179 107 ntBASIC-1.5□□□□□ -2.65
CCDC38Q502W7 MIR154-201ENST00000385243 84 ntBASIC-1.5□□□□□ -2.65
CCDC38Q502W7 MIR527-201ENST00000385244 85 ntBASIC-1.5□□□□□ -2.65
CCDC38Q502W7 U6.58-201ENST00000613107 107 ntBASIC-1.5□□□□□ -2.65
CCDC38Q502W7 U4.4-201ENST00000620626 117 ntBASIC-1.5□□□□□ -2.65
CCDC38Q502W7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.51□□□□□ -2.65
CCDC38Q502W7 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.52□□□□□ -2.65
CCDC38Q502W7 RNU6-787P-201ENST00000384032 107 ntBASIC-1.52□□□□□ -2.65
CCDC38Q502W7 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.52□□□□□ -2.65
CCDC38Q502W7 U4.2-201ENST00000618561 85 ntBASIC-1.52□□□□□ -2.65
CCDC38Q502W7 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.53□□□□□ -2.65
CCDC38Q502W7 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.53□□□□□ -2.65
CCDC38Q502W7 RNA5SP173-201ENST00000364857 136 ntBASIC-1.54□□□□□ -2.66
CCDC38Q502W7 RNU6-895P-201ENST00000384125 103 ntBASIC-1.55□□□□□ -2.66
CCDC38Q502W7 SNORD113-2-201ENST00000391082 72 ntBASIC-1.55□□□□□ -2.66
CCDC38Q502W7 MIR4306-201ENST00000583390 91 ntBASIC-1.55□□□□□ -2.66
CCDC38Q502W7 MIR630-201ENST00000384957 97 ntBASIC-1.56□□□□□ -2.66
CCDC38Q502W7 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.57□□□□□ -2.66
CCDC38Q502W7 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.57□□□□□ -2.66
CCDC38Q502W7 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.57□□□□□ -2.66
CCDC38Q502W7 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.57□□□□□ -2.66
CCDC38Q502W7 MIR3134-201ENST00000579433 74 ntBASIC-1.58□□□□□ -2.66
CCDC38Q502W7 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.58□□□□□ -2.66
CCDC38Q502W7 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.59□□□□□ -2.66
CCDC38Q502W7 RNU6-696P-201ENST00000390834 107 ntBASIC-1.59□□□□□ -2.66
CCDC38Q502W7 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.61□□□□□ -2.67
CCDC38Q502W7 SNORD19-201ENST00000391191 68 ntBASIC-1.61□□□□□ -2.67
CCDC38Q502W7 SNORD73B-201ENST00000364394 72 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 MIR29B1-201ENST00000385015 81 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 RNU6-687P-201ENST00000516443 89 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 MIR4490-201ENST00000582647 84 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 U7.4-201ENST00000614961 63 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 MIR3202-2-201ENST00000635980 79 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 MIR5683-201ENST00000636514 76 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.62□□□□□ -2.67
CCDC38Q502W7 MIR365A-201ENST00000362260 87 ntBASIC-1.63□□□□□ -2.67
CCDC38Q502W7 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.63□□□□□ -2.67
CCDC38Q502W7 RNU6-411P-201ENST00000384451 107 ntBASIC-1.63□□□□□ -2.67
CCDC38Q502W7 SNORD116-24-201ENST00000384549 92 ntBASIC-1.63□□□□□ -2.67
CCDC38Q502W7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.63□□□□□ -2.67
CCDC38Q502W7 SNORD115-31-201ENST00000365318 82 ntBASIC-1.64□□□□□ -2.67
CCDC38Q502W7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.65□□□□□ -2.67
CCDC38Q502W7 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.65□□□□□ -2.67
CCDC38Q502W7 MIR548Q-201ENST00000408404 100 ntBASIC-1.66□□□□□ -2.68
CCDC38Q502W7 SNORD116-16-201ENST00000384533 92 ntBASIC-1.67□□□□□ -2.68
CCDC38Q502W7 MIR507-201ENST00000385234 94 ntBASIC-1.67□□□□□ -2.68
CCDC38Q502W7 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.68□□□□□ -2.68
CCDC38Q502W7 SNORD114-3-201ENST00000364969 75 ntBASIC-1.68□□□□□ -2.68
CCDC38Q502W7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.68□□□□□ -2.68
CCDC38Q502W7 AP002795.1-201ENST00000534879 84 ntBASIC-1.68□□□□□ -2.68
CCDC38Q502W7 SNORA26.2-201ENST00000390922 122 ntBASIC-1.69□□□□□ -2.68
CCDC38Q502W7 MIR4441-201ENST00000582623 100 ntBASIC-1.69□□□□□ -2.68
CCDC38Q502W7 MIR6818-201ENST00000621576 65 ntBASIC-1.69□□□□□ -2.68
CCDC38Q502W7 RNU6-598P-201ENST00000364017 105 ntBASIC-1.7□□□□□ -2.68
CCDC38Q502W7 MIR1207-201ENST00000408249 87 ntBASIC-1.7□□□□□ -2.68
CCDC38Q502W7 RNY4P29-201ENST00000410801 97 ntBASIC-1.7□□□□□ -2.68
CCDC38Q502W7 AC138207.3-201ENST00000585289 166 ntBASIC-1.7□□□□□ -2.68
CCDC38Q502W7 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.71□□□□□ -2.68
CCDC38Q502W7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.71□□□□□ -2.68
CCDC38Q502W7 RNU6-542P-201ENST00000516405 103 ntBASIC-1.73□□□□□ -2.69
CCDC38Q502W7 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.73□□□□□ -2.69
CCDC38Q502W7 RNU6-706P-201ENST00000517229 104 ntBASIC-1.73□□□□□ -2.69
CCDC38Q502W7 RNA5SP26-201ENST00000362406 119 ntBASIC-1.74□□□□□ -2.69
CCDC38Q502W7 SNORA41B-201ENST00000384785 128 ntBASIC-1.75□□□□□ -2.69
CCDC38Q502W7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.76□□□□□ -2.69
CCDC38Q502W7 RNU6-573P-201ENST00000383938 106 ntBASIC-1.76□□□□□ -2.69
CCDC38Q502W7 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.76□□□□□ -2.69
CCDC38Q502W7 RNU6-634P-201ENST00000459134 106 ntBASIC-1.76□□□□□ -2.69
CCDC38Q502W7 RNU6-576P-201ENST00000390854 102 ntBASIC-1.77□□□□□ -2.69
CCDC38Q502W7 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.78□□□□□ -2.69
CCDC38Q502W7 U2.18-201ENST00000622185 84 ntBASIC-1.78□□□□□ -2.69
CCDC38Q502W7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.79□□□□□ -2.7
CCDC38Q502W7 MIR548AA1-201ENST00000384971 97 ntBASIC-1.8□□□□□ -2.7
CCDC38Q502W7 RNU6-279P-201ENST00000391297 101 ntBASIC-1.81□□□□□ -2.7
CCDC38Q502W7 MIR1255A-201ENST00000408338 113 ntBASIC-1.81□□□□□ -2.7
CCDC38Q502W7 RNU6-857P-201ENST00000515893 110 ntBASIC-1.81□□□□□ -2.7
CCDC38Q502W7 RNU6-228P-201ENST00000362700 106 ntBASIC-1.82□□□□□ -2.7
CCDC38Q502W7 RNU6-630P-201ENST00000391258 106 ntBASIC-1.82□□□□□ -2.7
CCDC38Q502W7 MIR1302-4-201ENST00000408701 150 ntBASIC-1.83□□□□□ -2.7
CCDC38Q502W7 SNORD1B-201ENST00000363091 84 ntBASIC-1.84□□□□□ -2.7
CCDC38Q502W7 RNU6-540P-201ENST00000384622 101 ntBASIC-1.84□□□□□ -2.7
CCDC38Q502W7 RPL35AP4-201ENST00000412007 102 ntBASIC-1.84□□□□□ -2.7
CCDC38Q502W7 RNU6-92P-201ENST00000605893 104 ntBASIC-1.84□□□□□ -2.7
CCDC38Q502W7 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms