Protein–RNA interactions for Protein: Q2UY09

COL28A1, Collagen alpha-1(XXVIII) chain, humanhuman

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1Q2UY09 MIR147A-201ENST00000385079 72 ntBASIC-0.58□□□□□ -2.5
COL28A1Q2UY09 RNU6-70P-201ENST00000516438 60 ntBASIC-0.58□□□□□ -2.5
COL28A1Q2UY09 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.59□□□□□ -2.5
COL28A1Q2UY09 SNORA26.2-201ENST00000390922 122 ntBASIC-0.59□□□□□ -2.5
COL28A1Q2UY09 MIR3134-201ENST00000579433 74 ntBASIC-0.59□□□□□ -2.5
COL28A1Q2UY09 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.59□□□□□ -2.5
COL28A1Q2UY09 MIR3202-2-201ENST00000635980 79 ntBASIC-0.59□□□□□ -2.5
COL28A1Q2UY09 RNU6-668P-201ENST00000364180 107 ntBASIC-0.6□□□□□ -2.51
COL28A1Q2UY09 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.6□□□□□ -2.51
COL28A1Q2UY09 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.6□□□□□ -2.51
COL28A1Q2UY09 MIR3115-201ENST00000577915 68 ntBASIC-0.6□□□□□ -2.51
COL28A1Q2UY09 RNU6-698P-201ENST00000363523 107 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 SNORD114-17-201ENST00000364699 75 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 RNA5SP173-201ENST00000364857 136 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 RNU6-34P-201ENST00000364874 107 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 RNU6-573P-201ENST00000383938 106 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 RNU6-246P-201ENST00000384702 107 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 MIR154-201ENST00000385243 84 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 RNU6-587P-201ENST00000391282 106 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 RNU7-134P-201ENST00000458997 64 ntBASIC-0.61□□□□□ -2.51
COL28A1Q2UY09 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.62□□□□□ -2.51
COL28A1Q2UY09 RNA5SP215-201ENST00000363440 122 ntBASIC-0.62□□□□□ -2.51
COL28A1Q2UY09 RNU6-24P-201ENST00000384440 107 ntBASIC-0.62□□□□□ -2.51
COL28A1Q2UY09 RNU6-687P-201ENST00000516443 89 ntBASIC-0.62□□□□□ -2.51
COL28A1Q2UY09 U4.4-201ENST00000620626 117 ntBASIC-0.62□□□□□ -2.51
COL28A1Q2UY09 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.63□□□□□ -2.51
COL28A1Q2UY09 SNORD115-31-201ENST00000365318 82 ntBASIC-0.63□□□□□ -2.51
COL28A1Q2UY09 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.63□□□□□ -2.51
COL28A1Q2UY09 MIR548V-201ENST00000584165 80 ntBASIC-0.63□□□□□ -2.51
COL28A1Q2UY09 U7.4-201ENST00000614961 63 ntBASIC-0.63□□□□□ -2.51
COL28A1Q2UY09 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.64□□□□□ -2.51
COL28A1Q2UY09 RNU6-228P-201ENST00000362700 106 ntBASIC-0.64□□□□□ -2.51
COL28A1Q2UY09 SNORD116-24-201ENST00000384549 92 ntBASIC-0.64□□□□□ -2.51
COL28A1Q2UY09 MIR1302-4-201ENST00000408701 150 ntBASIC-0.64□□□□□ -2.51
COL28A1Q2UY09 RNA5SP461-201ENST00000516451 104 ntBASIC-0.64□□□□□ -2.51
COL28A1Q2UY09 RNA5SP192-201ENST00000364404 120 ntBASIC-0.65□□□□□ -2.51
COL28A1Q2UY09 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.65□□□□□ -2.51
COL28A1Q2UY09 RNU6-411P-201ENST00000384451 107 ntBASIC-0.65□□□□□ -2.51
COL28A1Q2UY09 SNORA26.4-201ENST00000391188 123 ntBASIC-0.65□□□□□ -2.51
COL28A1Q2UY09 snoU83B.1-201ENST00000517136 88 ntBASIC-0.65□□□□□ -2.51
COL28A1Q2UY09 U7.5-201ENST00000517224 61 ntBASIC-0.65□□□□□ -2.51
COL28A1Q2UY09 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 RNU6-895P-201ENST00000384125 103 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 RNU6-458P-201ENST00000384179 107 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 MIR630-201ENST00000384957 97 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 MIR8485-201ENST00000401372 91 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 MIR1255A-201ENST00000408338 113 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 MIR4306-201ENST00000583390 91 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 U6.58-201ENST00000613107 107 ntBASIC-0.66□□□□□ -2.52
COL28A1Q2UY09 SNORD115-33-201ENST00000363723 82 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 RNU6-279P-201ENST00000391297 101 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 RNU7-88P-201ENST00000458752 63 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 RNU6-857P-201ENST00000515893 110 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 MIR4679-1-201ENST00000637619 75 ntBASIC-0.67□□□□□ -2.52
COL28A1Q2UY09 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.68□□□□□ -2.52
COL28A1Q2UY09 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.68□□□□□ -2.52
COL28A1Q2UY09 MIR527-201ENST00000385244 85 ntBASIC-0.68□□□□□ -2.52
COL28A1Q2UY09 RNU6-732P-201ENST00000516033 103 ntBASIC-0.68□□□□□ -2.52
COL28A1Q2UY09 SNORD63.1-201ENST00000516178 80 ntBASIC-0.68□□□□□ -2.52
COL28A1Q2UY09 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.68□□□□□ -2.52
COL28A1Q2UY09 RNU6-226P-201ENST00000363778 107 ntBASIC-0.69□□□□□ -2.52
COL28A1Q2UY09 SNORD78.1-201ENST00000390866 65 ntBASIC-0.69□□□□□ -2.52
COL28A1Q2UY09 SNORD113-2-201ENST00000391082 72 ntBASIC-0.69□□□□□ -2.52
COL28A1Q2UY09 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.69□□□□□ -2.52
COL28A1Q2UY09 MIR429-201ENST00000362106 83 ntBASIC-0.7□□□□□ -2.52
COL28A1Q2UY09 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.7□□□□□ -2.52
COL28A1Q2UY09 RNU6-634P-201ENST00000459134 106 ntBASIC-0.7□□□□□ -2.52
COL28A1Q2UY09 MIR889-201ENST00000401280 79 ntBASIC-0.71□□□□□ -2.52
COL28A1Q2UY09 MIR3165-201ENST00000579874 75 ntBASIC-0.71□□□□□ -2.52
COL28A1Q2UY09 MIR6818-201ENST00000621576 65 ntBASIC-0.71□□□□□ -2.52
COL28A1Q2UY09 RNU6-696P-201ENST00000390834 107 ntBASIC-0.72□□□□□ -2.52
COL28A1Q2UY09 SNORD19-201ENST00000391191 68 ntBASIC-0.72□□□□□ -2.52
COL28A1Q2UY09 AL353691.2-201ENST00000443795 59 ntBASIC-0.72□□□□□ -2.52
COL28A1Q2UY09 RNU6-523P-201ENST00000516304 54 ntBASIC-0.72□□□□□ -2.52
COL28A1Q2UY09 SNORD116-16-201ENST00000384533 92 ntBASIC-0.73□□□□□ -2.53
COL28A1Q2UY09 RNU6-706P-201ENST00000517229 104 ntBASIC-0.73□□□□□ -2.53
COL28A1Q2UY09 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.73□□□□□ -2.53
COL28A1Q2UY09 MIR365A-201ENST00000362260 87 ntBASIC-0.74□□□□□ -2.53
COL28A1Q2UY09 RNU6-540P-201ENST00000384622 101 ntBASIC-0.74□□□□□ -2.53
COL28A1Q2UY09 MIR29B1-201ENST00000385015 81 ntBASIC-0.74□□□□□ -2.53
COL28A1Q2UY09 RNA5SP225-201ENST00000410874 135 ntBASIC-0.74□□□□□ -2.53
COL28A1Q2UY09 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.74□□□□□ -2.53
COL28A1Q2UY09 RNA5SP26-201ENST00000362406 119 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 RNU6-598P-201ENST00000364017 105 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 SNORA41B-201ENST00000384785 128 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 AP002795.1-201ENST00000534879 84 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 MIR4520-1-201ENST00000582609 70 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 AC091912.2-201ENST00000624798 167 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 MIR6874-201ENST00000635894 71 ntBASIC-0.75□□□□□ -2.53
COL28A1Q2UY09 HLA-S-202ENST00000425174 53 ntBASIC-0.76□□□□□ -2.53
COL28A1Q2UY09 RNU6-542P-201ENST00000516405 103 ntBASIC-0.76□□□□□ -2.53
COL28A1Q2UY09 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.76□□□□□ -2.53
COL28A1Q2UY09 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.77□□□□□ -2.53
COL28A1Q2UY09 RNU6-576P-201ENST00000390854 102 ntBASIC-0.77□□□□□ -2.53
COL28A1Q2UY09 RNU6-663P-201ENST00000391105 106 ntBASIC-0.77□□□□□ -2.53
COL28A1Q2UY09 AC138207.3-201ENST00000585289 166 ntBASIC-0.77□□□□□ -2.53
COL28A1Q2UY09 MIR5683-201ENST00000636514 76 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms