Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.22□□□□□ -3.08
HIST1H1AQ02539 MIR379-201ENST00000362218 67 ntBASIC-4.23□□□□□ -3.09
HIST1H1AQ02539 RNU6-361P-201ENST00000364454 107 ntBASIC-4.23□□□□□ -3.09
HIST1H1AQ02539 MIR1254-1-201ENST00000408257 97 ntBASIC-4.23□□□□□ -3.09
HIST1H1AQ02539 RNU7-160P-201ENST00000516660 62 ntBASIC-4.23□□□□□ -3.09
HIST1H1AQ02539 MTATP8P1-201ENST00000467115 207 ntBASIC-4.24□□□□□ -3.09
HIST1H1AQ02539 RNU6-162P-201ENST00000516228 103 ntBASIC-4.24□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.25□□□□□ -3.09
HIST1H1AQ02539 RNU6-68P-201ENST00000516576 104 ntBASIC-4.25□□□□□ -3.09
HIST1H1AQ02539 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.26□□□□□ -3.09
HIST1H1AQ02539 RNU6-557P-201ENST00000516842 110 ntBASIC-4.26□□□□□ -3.09
HIST1H1AQ02539 U6atac.1-201ENST00000616025 117 ntBASIC-4.26□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.580-201ENST00000391004 95 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 RNU6-111P-201ENST00000517179 105 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 MIR3171-201ENST00000584270 74 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 U7.3-201ENST00000616123 62 ntBASIC-4.27□□□□□ -3.09
HIST1H1AQ02539 SNORD113.1-201ENST00000363280 73 ntBASIC-4.28□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.28□□□□□ -3.09
HIST1H1AQ02539 MIR509-1-201ENST00000385265 94 ntBASIC-4.28□□□□□ -3.09
HIST1H1AQ02539 MIR509-2-201ENST00000390724 91 ntBASIC-4.28□□□□□ -3.09
HIST1H1AQ02539 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.29□□□□□ -3.1
HIST1H1AQ02539 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.29□□□□□ -3.1
HIST1H1AQ02539 MIR8053-201ENST00000613344 75 ntBASIC-4.29□□□□□ -3.1
HIST1H1AQ02539 SNORD116-18-201ENST00000383961 92 ntBASIC-4.3□□□□□ -3.1
HIST1H1AQ02539 MIR569-201ENST00000385228 96 ntBASIC-4.3□□□□□ -3.1
HIST1H1AQ02539 AC093729.1-201ENST00000513074 128 ntBASIC-4.3□□□□□ -3.1
HIST1H1AQ02539 Y_RNA.662-201ENST00000516028 97 ntBASIC-4.3□□□□□ -3.1
HIST1H1AQ02539 Y_RNA.202-201ENST00000364083 110 ntBASIC-4.31□□□□□ -3.1
HIST1H1AQ02539 RNU6-686P-201ENST00000364839 107 ntBASIC-4.31□□□□□ -3.1
HIST1H1AQ02539 MTATP8P2-201ENST00000435212 202 ntBASIC-4.31□□□□□ -3.1
HIST1H1AQ02539 RNU6-633P-201ENST00000362612 103 ntBASIC-4.32□□□□□ -3.1
HIST1H1AQ02539 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.32□□□□□ -3.1
HIST1H1AQ02539 RNU6-800P-201ENST00000384473 103 ntBASIC-4.33□□□□□ -3.1
HIST1H1AQ02539 MIR3128-201ENST00000581957 66 ntBASIC-4.33□□□□□ -3.1
HIST1H1AQ02539 Y_RNA.138-201ENST00000363462 102 ntBASIC-4.34□□□□□ -3.1
HIST1H1AQ02539 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.34□□□□□ -3.1
HIST1H1AQ02539 Y_RNA.350-201ENST00000365409 98 ntBASIC-4.35□□□□□ -3.11
HIST1H1AQ02539 RNU6-402P-201ENST00000410678 103 ntBASIC-4.35□□□□□ -3.11
HIST1H1AQ02539 AC026407.1-201ENST00000518369 204 ntBASIC-4.35□□□□□ -3.11
HIST1H1AQ02539 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.36□□□□□ -3.11
HIST1H1AQ02539 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.36□□□□□ -3.11
HIST1H1AQ02539 RNU6-554P-201ENST00000410466 106 ntBASIC-4.36□□□□□ -3.11
HIST1H1AQ02539 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.37□□□□□ -3.11
HIST1H1AQ02539 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.37□□□□□ -3.11
HIST1H1AQ02539 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.37□□□□□ -3.11
HIST1H1AQ02539 MT-TD-201ENST00000387419 68 ntBASIC-4.37□□□□□ -3.11
HIST1H1AQ02539 SNORD33.1-201ENST00000516213 88 ntBASIC-4.37□□□□□ -3.11
HIST1H1AQ02539 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.38□□□□□ -3.11
HIST1H1AQ02539 RNU6-987P-201ENST00000384759 104 ntBASIC-4.38□□□□□ -3.11
HIST1H1AQ02539 RNU6-789P-201ENST00000517105 102 ntBASIC-4.38□□□□□ -3.11
HIST1H1AQ02539 AC020661.2-201ENST00000560114 134 ntBASIC-4.38□□□□□ -3.11
HIST1H1AQ02539 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 RNU6-755P-201ENST00000364400 103 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 MIR590-201ENST00000385008 97 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 RNU7-107P-201ENST00000459121 61 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 RNU6-659P-201ENST00000516454 104 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 MIR3914-2-201ENST00000637339 95 ntBASIC-4.39□□□□□ -3.11
HIST1H1AQ02539 SNORD45A-201ENST00000384512 84 ntBASIC-4.4□□□□□ -3.11
HIST1H1AQ02539 RNU6-1023P-201ENST00000516137 106 ntBASIC-4.4□□□□□ -3.11
HIST1H1AQ02539 AL359920.1-201ENST00000618332 176 ntBASIC-4.4□□□□□ -3.11
HIST1H1AQ02539 MIR1297-201ENST00000637311 77 ntBASIC-4.4□□□□□ -3.11
HIST1H1AQ02539 SNORA63.4-201ENST00000362763 126 ntBASIC-4.41□□□□□ -3.12
HIST1H1AQ02539 SNORD114-13-201ENST00000364377 74 ntBASIC-4.41□□□□□ -3.12
HIST1H1AQ02539 SNORA20.1-201ENST00000364790 130 ntBASIC-4.41□□□□□ -3.12
HIST1H1AQ02539 RNU6-345P-201ENST00000517001 107 ntBASIC-4.41□□□□□ -3.12
HIST1H1AQ02539 MIR4484-201ENST00000582855 83 ntBASIC-4.41□□□□□ -3.12
HIST1H1AQ02539 Y_RNA.93-201ENST00000363066 109 ntBASIC-4.42□□□□□ -3.12
HIST1H1AQ02539 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.42□□□□□ -3.12
HIST1H1AQ02539 MIR7110-201ENST00000612638 86 ntBASIC-4.42□□□□□ -3.12
HIST1H1AQ02539 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.43□□□□□ -3.12
HIST1H1AQ02539 MIR548F4-201ENST00000408515 105 ntBASIC-4.43□□□□□ -3.12
HIST1H1AQ02539 MTND4LP9-201ENST00000427694 174 ntBASIC-4.43□□□□□ -3.12
HIST1H1AQ02539 RNA5SP106-201ENST00000517274 100 ntBASIC-4.43□□□□□ -3.12
HIST1H1AQ02539 RNU6-867P-201ENST00000364956 107 ntBASIC-4.44□□□□□ -3.12
HIST1H1AQ02539 MIR4668-201ENST00000582284 70 ntBASIC-4.44□□□□□ -3.12
HIST1H1AQ02539 RNU6-394P-201ENST00000410735 107 ntBASIC-4.45□□□□□ -3.12
HIST1H1AQ02539 RNU6-810P-201ENST00000364001 107 ntBASIC-4.46□□□□□ -3.12
HIST1H1AQ02539 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.46□□□□□ -3.12
HIST1H1AQ02539 RNU7-120P-201ENST00000459334 63 ntBASIC-4.46□□□□□ -3.12
HIST1H1AQ02539 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.46□□□□□ -3.12
HIST1H1AQ02539 U6.95-201ENST00000636931 70 ntBASIC-4.46□□□□□ -3.12
HIST1H1AQ02539 MIR4426-201ENST00000640330 63 ntBASIC-4.46□□□□□ -3.12
HIST1H1AQ02539 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.47□□□□□ -3.13
HIST1H1AQ02539 RNY4P10-201ENST00000365571 96 ntBASIC-4.47□□□□□ -3.13
HIST1H1AQ02539 RNU6-176P-201ENST00000517196 105 ntBASIC-4.47□□□□□ -3.13
HIST1H1AQ02539 RNU6-590P-201ENST00000365039 107 ntBASIC-4.48□□□□□ -3.13
HIST1H1AQ02539 MTND5P20-201ENST00000448677 143 ntBASIC-4.48□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.668-201ENST00000516233 93 ntBASIC-4.48□□□□□ -3.13
HIST1H1AQ02539 RNU6-426P-201ENST00000516464 97 ntBASIC-4.48□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.48□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.47-201ENST00000362697 108 ntBASIC-4.49□□□□□ -3.13
HIST1H1AQ02539 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.49□□□□□ -3.13
HIST1H1AQ02539 RNU6-300P-201ENST00000459080 104 ntBASIC-4.49□□□□□ -3.13
HIST1H1AQ02539 AP001318.4-201ENST00000616637 121 ntBASIC-4.49□□□□□ -3.13
HIST1H1AQ02539 MIR1302-5-201ENST00000408164 150 ntBASIC-4.5□□□□□ -3.13
HIST1H1AQ02539 RNU6-109P-201ENST00000516364 107 ntBASIC-4.5□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms