Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU6-106P-201ENST00000384405 107 ntBASIC-3.07□□□□□ -2.9
H3F3AP84243 MIR548N-201ENST00000408742 75 ntBASIC-3.07□□□□□ -2.9
H3F3AP84243 AL117187.1-201ENST00000555482 181 ntBASIC-3.07□□□□□ -2.9
H3F3AP84243 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.07□□□□□ -2.9
H3F3AP84243 RNU6-686P-201ENST00000364839 107 ntBASIC-3.08□□□□□ -2.9
H3F3AP84243 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.08□□□□□ -2.9
H3F3AP84243 SNORD45A-201ENST00000384512 84 ntBASIC-3.08□□□□□ -2.9
H3F3AP84243 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.08□□□□□ -2.9
H3F3AP84243 SNORD54-201ENST00000459159 67 ntBASIC-3.08□□□□□ -2.9
H3F3AP84243 MIR548S-201ENST00000581352 82 ntBASIC-3.08□□□□□ -2.9
H3F3AP84243 RNU6-230P-201ENST00000362457 104 ntBASIC-3.09□□□□□ -2.9
H3F3AP84243 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.09□□□□□ -2.9
H3F3AP84243 RNU6-557P-201ENST00000516842 110 ntBASIC-3.1□□□□□ -2.91
H3F3AP84243 RNU6-912P-201ENST00000363800 104 ntBASIC-3.11□□□□□ -2.91
H3F3AP84243 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.11□□□□□ -2.91
H3F3AP84243 RNU6-129P-201ENST00000391022 107 ntBASIC-3.11□□□□□ -2.91
H3F3AP84243 SNORA17.4-201ENST00000391287 132 ntBASIC-3.11□□□□□ -2.91
H3F3AP84243 MIR4668-201ENST00000582284 70 ntBASIC-3.11□□□□□ -2.91
H3F3AP84243 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.11□□□□□ -2.91
H3F3AP84243 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.12□□□□□ -2.91
H3F3AP84243 MTATP8P2-201ENST00000435212 202 ntBASIC-3.12□□□□□ -2.91
H3F3AP84243 MTCYBP6-201ENST00000441810 138 ntBASIC-3.12□□□□□ -2.91
H3F3AP84243 AP001318.4-201ENST00000616637 121 ntBASIC-3.12□□□□□ -2.91
H3F3AP84243 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.13□□□□□ -2.91
H3F3AP84243 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.13□□□□□ -2.91
H3F3AP84243 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.13□□□□□ -2.91
H3F3AP84243 SNORA40-201ENST00000388090 126 ntBASIC-3.13□□□□□ -2.91
H3F3AP84243 RNU6-659P-201ENST00000516454 104 ntBASIC-3.13□□□□□ -2.91
H3F3AP84243 MTND5P41-201ENST00000517498 206 ntBASIC-3.13□□□□□ -2.91
H3F3AP84243 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 RNY3P14-201ENST00000384309 102 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 MIR8053-201ENST00000613344 75 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 AC004792.1-201ENST00000614523 137 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 MIR664A-201ENST00000626086 82 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 U6.95-201ENST00000636931 70 ntBASIC-3.14□□□□□ -2.91
H3F3AP84243 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.15□□□□□ -2.91
H3F3AP84243 MIR1302-5-201ENST00000408164 150 ntBASIC-3.15□□□□□ -2.91
H3F3AP84243 RNU6-971P-201ENST00000516920 106 ntBASIC-3.15□□□□□ -2.91
H3F3AP84243 AC008737.2-201ENST00000599446 118 ntBASIC-3.15□□□□□ -2.91
H3F3AP84243 RNU6-828P-201ENST00000364876 107 ntBASIC-3.16□□□□□ -2.92
H3F3AP84243 SNORD116-21-201ENST00000384507 92 ntBASIC-3.16□□□□□ -2.92
H3F3AP84243 RNU6-257P-201ENST00000410238 98 ntBASIC-3.16□□□□□ -2.92
H3F3AP84243 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.17□□□□□ -2.92
H3F3AP84243 RNU6-554P-201ENST00000410466 106 ntBASIC-3.17□□□□□ -2.92
H3F3AP84243 SNORA19-201ENST00000384737 128 ntBASIC-3.18□□□□□ -2.92
H3F3AP84243 MIR568-201ENST00000385036 95 ntBASIC-3.18□□□□□ -2.92
H3F3AP84243 SNORA63.4-201ENST00000362763 126 ntBASIC-3.19□□□□□ -2.92
H3F3AP84243 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.19□□□□□ -2.92
H3F3AP84243 RNU6-530P-201ENST00000391180 107 ntBASIC-3.19□□□□□ -2.92
H3F3AP84243 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.19□□□□□ -2.92
H3F3AP84243 RNU7-160P-201ENST00000516660 62 ntBASIC-3.19□□□□□ -2.92
H3F3AP84243 RNU6-789P-201ENST00000517105 102 ntBASIC-3.19□□□□□ -2.92
H3F3AP84243 RNU6-810P-201ENST00000364001 107 ntBASIC-3.2□□□□□ -2.92
H3F3AP84243 RNU6-361P-201ENST00000364454 107 ntBASIC-3.2□□□□□ -2.92
H3F3AP84243 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.2□□□□□ -2.92
H3F3AP84243 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.2□□□□□ -2.92
H3F3AP84243 AC044792.1-201ENST00000593294 196 ntBASIC-3.2□□□□□ -2.92
H3F3AP84243 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.2□□□□□ -2.92
H3F3AP84243 RNU6-755P-201ENST00000364400 103 ntBASIC-3.21□□□□□ -2.92
H3F3AP84243 RNU6-402P-201ENST00000410678 103 ntBASIC-3.21□□□□□ -2.92
H3F3AP84243 RNU6-267P-201ENST00000516714 103 ntBASIC-3.21□□□□□ -2.92
H3F3AP84243 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.21□□□□□ -2.92
H3F3AP84243 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.22□□□□□ -2.92
H3F3AP84243 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.22□□□□□ -2.92
H3F3AP84243 MIR548BB-201ENST00000626714 66 ntBASIC-3.22□□□□□ -2.92
H3F3AP84243 MIR1297-201ENST00000637311 77 ntBASIC-3.22□□□□□ -2.92
H3F3AP84243 RNU6-834P-201ENST00000362367 110 ntBASIC-3.23□□□□□ -2.93
H3F3AP84243 MIR1302-3-201ENST00000408128 138 ntBASIC-3.23□□□□□ -2.93
H3F3AP84243 MIR1254-1-201ENST00000408257 97 ntBASIC-3.23□□□□□ -2.93
H3F3AP84243 MTCYBP9-201ENST00000431021 303 ntBASIC-3.23□□□□□ -2.93
H3F3AP84243 MIR7110-201ENST00000612638 86 ntBASIC-3.23□□□□□ -2.93
H3F3AP84243 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.23□□□□□ -2.93
H3F3AP84243 MIR379-201ENST00000362218 67 ntBASIC-3.25□□□□□ -2.93
H3F3AP84243 RNA5SP93-201ENST00000362525 114 ntBASIC-3.25□□□□□ -2.93
H3F3AP84243 RNU6-68P-201ENST00000516576 104 ntBASIC-3.25□□□□□ -2.93
H3F3AP84243 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.26□□□□□ -2.93
H3F3AP84243 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.26□□□□□ -2.93
H3F3AP84243 SNORD116.2-201ENST00000391251 93 ntBASIC-3.26□□□□□ -2.93
H3F3AP84243 RNU6-219P-201ENST00000364728 107 ntBASIC-3.27□□□□□ -2.93
H3F3AP84243 SNORD116-22-201ENST00000384430 92 ntBASIC-3.27□□□□□ -2.93
H3F3AP84243 MIR606-201ENST00000384851 96 ntBASIC-3.27□□□□□ -2.93
H3F3AP84243 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.27□□□□□ -2.93
H3F3AP84243 MIR4426-201ENST00000640330 63 ntBASIC-3.27□□□□□ -2.93
H3F3AP84243 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.28□□□□□ -2.93
H3F3AP84243 RNU6-200P-201ENST00000364743 107 ntBASIC-3.29□□□□□ -2.94
H3F3AP84243 SNORD116-24-201ENST00000384549 92 ntBASIC-3.29□□□□□ -2.94
H3F3AP84243 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.29□□□□□ -2.94
H3F3AP84243 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.29□□□□□ -2.94
H3F3AP84243 RNU6-92P-201ENST00000605893 104 ntBASIC-3.3□□□□□ -2.94
H3F3AP84243 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.31□□□□□ -2.94
H3F3AP84243 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.31□□□□□ -2.94
H3F3AP84243 RNU6-231P-201ENST00000517122 103 ntBASIC-3.31□□□□□ -2.94
H3F3AP84243 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.32□□□□□ -2.94
H3F3AP84243 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.32□□□□□ -2.94
H3F3AP84243 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.32□□□□□ -2.94
H3F3AP84243 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.32□□□□□ -2.94
H3F3AP84243 RNU6-497P-201ENST00000365316 104 ntBASIC-3.32□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms