Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.14□□□□□ -2.43
LMO4P61968 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.14□□□□□ -2.43
LMO4P61968 RNU6-829P-201ENST00000363700 112 ntBASIC-0.15□□□□□ -2.43
LMO4P61968 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
LMO4P61968 RNU6-499P-201ENST00000365615 107 ntBASIC-0.15□□□□□ -2.43
LMO4P61968 SNORD22.1-201ENST00000516331 125 ntBASIC-0.15□□□□□ -2.43
LMO4P61968 MIR518B-201ENST00000385127 83 ntBASIC-0.16□□□□□ -2.44
LMO4P61968 SNORD116.2-201ENST00000391251 93 ntBASIC-0.16□□□□□ -2.44
LMO4P61968 RNU6-732P-201ENST00000516033 103 ntBASIC-0.16□□□□□ -2.44
LMO4P61968 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.16□□□□□ -2.44
LMO4P61968 MIR7110-201ENST00000612638 86 ntBASIC-0.16□□□□□ -2.44
LMO4P61968 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.17□□□□□ -2.44
LMO4P61968 MIR579-201ENST00000385221 98 ntBASIC-0.17□□□□□ -2.44
LMO4P61968 SNORD57-201ENST00000448188 72 ntBASIC-0.17□□□□□ -2.44
LMO4P61968 RNU7-119P-201ENST00000459279 63 ntBASIC-0.17□□□□□ -2.44
LMO4P61968 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 SNORD74.6-201ENST00000364796 70 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 RNU6-520P-201ENST00000384717 104 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 SNORD75.1-201ENST00000408373 60 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 RNU6-721P-201ENST00000410155 105 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 SNORD18.2-201ENST00000459604 70 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 SNORA40.16-201ENST00000517238 121 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.18□□□□□ -2.44
LMO4P61968 RNU6-810P-201ENST00000364001 107 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 SNORD113-4-201ENST00000364802 75 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 MIR204-201ENST00000385200 110 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 SNORD63.1-201ENST00000516178 80 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 MIR3179-1-201ENST00000578940 84 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 MIR3179-2-201ENST00000579107 84 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 MIR3179-3-201ENST00000579566 84 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 MIR3179-4-201ENST00000617599 84 ntBASIC-0.19□□□□□ -2.44
LMO4P61968 MIR548AA1-201ENST00000384971 97 ntBASIC-0.2□□□□□ -2.44
LMO4P61968 SNORA40B-201ENST00000385573 128 ntBASIC-0.2□□□□□ -2.44
LMO4P61968 SNORD19-201ENST00000391191 68 ntBASIC-0.2□□□□□ -2.44
LMO4P61968 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.2□□□□□ -2.44
LMO4P61968 RNU7-151P-201ENST00000516930 53 ntBASIC-0.2□□□□□ -2.44
LMO4P61968 AP000533.3-201ENST00000447704 118 ntBASIC-0.21□□□□□ -2.44
LMO4P61968 SNORA13-201ENST00000458790 133 ntBASIC-0.21□□□□□ -2.44
LMO4P61968 AP002795.1-201ENST00000534879 84 ntBASIC-0.21□□□□□ -2.44
LMO4P61968 MIR7978-201ENST00000636158 59 ntBASIC-0.21□□□□□ -2.44
LMO4P61968 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.22□□□□□ -2.44
LMO4P61968 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.23□□□□□ -2.45
LMO4P61968 SNORA26.4-201ENST00000391188 123 ntBASIC-0.23□□□□□ -2.45
LMO4P61968 RNU6-995P-201ENST00000391244 107 ntBASIC-0.23□□□□□ -2.45
LMO4P61968 MIR4490-201ENST00000582647 84 ntBASIC-0.23□□□□□ -2.45
LMO4P61968 SNORD114-17-201ENST00000364699 75 ntBASIC-0.24□□□□□ -2.45
LMO4P61968 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.24□□□□□ -2.45
LMO4P61968 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
LMO4P61968 MIR520D-201ENST00000385002 87 ntBASIC-0.25□□□□□ -2.45
LMO4P61968 MIR125B1-201ENST00000385236 88 ntBASIC-0.25□□□□□ -2.45
LMO4P61968 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
LMO4P61968 MIR548Q-201ENST00000408404 100 ntBASIC-0.25□□□□□ -2.45
LMO4P61968 SNORD126-201ENST00000459475 77 ntBASIC-0.25□□□□□ -2.45
LMO4P61968 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 SNORD14C-201ENST00000365382 88 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 RNU6-35P-201ENST00000384530 107 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 MTND4LP19-201ENST00000403051 166 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 RNU7-160P-201ENST00000516660 62 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 MIR3170-201ENST00000582699 77 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 MIR4436A-201ENST00000585278 85 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.26□□□□□ -2.45
LMO4P61968 SNORD115-33-201ENST00000363723 82 ntBASIC-0.27□□□□□ -2.45
LMO4P61968 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.27□□□□□ -2.45
LMO4P61968 RNU6-974P-201ENST00000384099 108 ntBASIC-0.27□□□□□ -2.45
LMO4P61968 AL353691.2-201ENST00000443795 59 ntBASIC-0.27□□□□□ -2.45
LMO4P61968 AC021146.6-201ENST00000514659 117 ntBASIC-0.27□□□□□ -2.45
LMO4P61968 IGLVI-20-201ENST00000519296 130 ntBASIC-0.27□□□□□ -2.45
LMO4P61968 SNORA3B-201ENST00000391305 131 ntBASIC-0.28□□□□□ -2.45
LMO4P61968 RNU6-284P-201ENST00000411105 106 ntBASIC-0.28□□□□□ -2.45
LMO4P61968 RNU6-320P-201ENST00000516511 106 ntBASIC-0.28□□□□□ -2.45
LMO4P61968 RNU6-614P-201ENST00000384369 107 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 RNU6-258P-201ENST00000390884 101 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 MIR5589-201ENST00000579442 60 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 MIR4802-201ENST00000581881 80 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 MIR4636-201ENST00000582271 80 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 U6.59-201ENST00000615686 107 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 MIR5683-201ENST00000636514 76 ntBASIC-0.29□□□□□ -2.46
LMO4P61968 SNORD114-14-201ENST00000362723 75 ntBASIC-0.3□□□□□ -2.46
LMO4P61968 SNORD114-31-201ENST00000363219 75 ntBASIC-0.3□□□□□ -2.46
LMO4P61968 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.3□□□□□ -2.46
LMO4P61968 RNU6-828P-201ENST00000364876 107 ntBASIC-0.3□□□□□ -2.46
LMO4P61968 SNORD63.2-201ENST00000516303 64 ntBASIC-0.3□□□□□ -2.46
LMO4P61968 RNU6-247P-201ENST00000362636 107 ntBASIC-0.31□□□□□ -2.46
LMO4P61968 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
LMO4P61968 MIR4645-201ENST00000583158 77 ntBASIC-0.32□□□□□ -2.46
LMO4P61968 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.33□□□□□ -2.46
LMO4P61968 RNU6-608P-201ENST00000383927 104 ntBASIC-0.33□□□□□ -2.46
LMO4P61968 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
LMO4P61968 RPL35AP4-201ENST00000412007 102 ntBASIC-0.34□□□□□ -2.46
LMO4P61968 RNU6-419P-201ENST00000517030 63 ntBASIC-0.34□□□□□ -2.46
LMO4P61968 MIR548X-201ENST00000580069 75 ntBASIC-0.34□□□□□ -2.46
LMO4P61968 RNU6-431P-201ENST00000383874 107 ntBASIC-0.35□□□□□ -2.47
LMO4P61968 RNU6-980P-201ENST00000516925 103 ntBASIC-0.35□□□□□ -2.47
LMO4P61968 RNU6-936P-201ENST00000384005 107 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms