Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SNORD18C-201ENST00000362704 69 ntBASIC-3.03□□□□□ -2.89
HIST1H2BDP58876 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.03□□□□□ -2.89
HIST1H2BDP58876 RNU6-172P-201ENST00000411000 93 ntBASIC-3.03□□□□□ -2.89
HIST1H2BDP58876 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.03□□□□□ -2.89
HIST1H2BDP58876 HAR1A.1-201ENST00000459583 118 ntBASIC-3.03□□□□□ -2.89
HIST1H2BDP58876 MIR8053-201ENST00000613344 75 ntBASIC-3.03□□□□□ -2.89
HIST1H2BDP58876 RNU6-106P-201ENST00000384405 107 ntBASIC-3.04□□□□□ -2.9
HIST1H2BDP58876 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.04□□□□□ -2.9
HIST1H2BDP58876 RNU6-129P-201ENST00000391022 107 ntBASIC-3.04□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.375-201ENST00000365625 101 ntBASIC-3.05□□□□□ -2.9
HIST1H2BDP58876 MIR125B1-201ENST00000385236 88 ntBASIC-3.05□□□□□ -2.9
HIST1H2BDP58876 MIR4484-201ENST00000582855 83 ntBASIC-3.05□□□□□ -2.9
HIST1H2BDP58876 MIR1297-201ENST00000637311 77 ntBASIC-3.05□□□□□ -2.9
HIST1H2BDP58876 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.06□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.06□□□□□ -2.9
HIST1H2BDP58876 MIR4748-201ENST00000578076 82 ntBASIC-3.06□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.07□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.07□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.413-201ENST00000384007 102 ntBASIC-3.07□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.754-201ENST00000476024 102 ntBASIC-3.07□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.790-201ENST00000614282 102 ntBASIC-3.07□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.782-201ENST00000614695 102 ntBASIC-3.07□□□□□ -2.9
HIST1H2BDP58876 RNU6-402P-201ENST00000410678 103 ntBASIC-3.08□□□□□ -2.9
HIST1H2BDP58876 RNU6-497P-201ENST00000365316 104 ntBASIC-3.09□□□□□ -2.9
HIST1H2BDP58876 RNU6-974P-201ENST00000384099 108 ntBASIC-3.09□□□□□ -2.9
HIST1H2BDP58876 RNU6-346P-201ENST00000516288 111 ntBASIC-3.09□□□□□ -2.9
HIST1H2BDP58876 FTX_4.1-201ENST00000616291 147 ntBASIC-3.09□□□□□ -2.9
HIST1H2BDP58876 MIR548BB-201ENST00000626714 66 ntBASIC-3.09□□□□□ -2.9
HIST1H2BDP58876 Y_RNA.55-201ENST00000362797 102 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 RNU6-219P-201ENST00000364728 107 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 SNORD116-14-201ENST00000383894 92 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 SNORD116-17-201ENST00000383929 92 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 SNORD116-22-201ENST00000384430 92 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 SNORD116-15-201ENST00000384445 92 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 SNORD116-19-201ENST00000384729 92 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 MIR3139-201ENST00000579145 76 ntBASIC-3.1□□□□□ -2.91
HIST1H2BDP58876 SNORD45A-201ENST00000384512 84 ntBASIC-3.11□□□□□ -2.91
HIST1H2BDP58876 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.11□□□□□ -2.91
HIST1H2BDP58876 AC097484.2-201ENST00000509147 251 ntBASIC-3.11□□□□□ -2.91
HIST1H2BDP58876 SNORA63.4-201ENST00000362763 126 ntBASIC-3.12□□□□□ -2.91
HIST1H2BDP58876 RNU6-755P-201ENST00000364400 103 ntBASIC-3.12□□□□□ -2.91
HIST1H2BDP58876 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.12□□□□□ -2.91
HIST1H2BDP58876 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.12□□□□□ -2.91
HIST1H2BDP58876 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.13□□□□□ -2.91
HIST1H2BDP58876 RNU6-267P-201ENST00000516714 103 ntBASIC-3.13□□□□□ -2.91
HIST1H2BDP58876 RNY1P1-201ENST00000364372 112 ntBASIC-3.14□□□□□ -2.91
HIST1H2BDP58876 SNORD114-3-201ENST00000364969 75 ntBASIC-3.14□□□□□ -2.91
HIST1H2BDP58876 RNA5SP331-201ENST00000364986 107 ntBASIC-3.14□□□□□ -2.91
HIST1H2BDP58876 RNU6-463P-201ENST00000384340 107 ntBASIC-3.14□□□□□ -2.91
HIST1H2BDP58876 RNU6-520P-201ENST00000384717 104 ntBASIC-3.14□□□□□ -2.91
HIST1H2BDP58876 MIR581-201ENST00000384895 96 ntBASIC-3.14□□□□□ -2.91
HIST1H2BDP58876 SNORD60-201ENST00000383903 83 ntBASIC-3.15□□□□□ -2.91
HIST1H2BDP58876 MIR2052-201ENST00000636055 55 ntBASIC-3.15□□□□□ -2.91
HIST1H2BDP58876 RNY1P5-201ENST00000383890 115 ntBASIC-3.16□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.16□□□□□ -2.92
HIST1H2BDP58876 RNU6-380P-201ENST00000410207 107 ntBASIC-3.16□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.17□□□□□ -2.92
HIST1H2BDP58876 RNU6-907P-201ENST00000390924 102 ntBASIC-3.18□□□□□ -2.92
HIST1H2BDP58876 AP001318.4-201ENST00000616637 121 ntBASIC-3.18□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.19□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.19□□□□□ -2.92
HIST1H2BDP58876 RNU7-160P-201ENST00000516660 62 ntBASIC-3.19□□□□□ -2.92
HIST1H2BDP58876 MIR664A-201ENST00000626086 82 ntBASIC-3.19□□□□□ -2.92
HIST1H2BDP58876 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.19□□□□□ -2.92
HIST1H2BDP58876 MIR202-201ENST00000362219 110 ntBASIC-3.2□□□□□ -2.92
HIST1H2BDP58876 RNU6-649P-201ENST00000384463 107 ntBASIC-3.2□□□□□ -2.92
HIST1H2BDP58876 MT-TG-201ENST00000387429 68 ntBASIC-3.2□□□□□ -2.92
HIST1H2BDP58876 MIR548N-201ENST00000408742 75 ntBASIC-3.2□□□□□ -2.92
HIST1H2BDP58876 AL117351.2-201ENST00000513571 157 ntBASIC-3.2□□□□□ -2.92
HIST1H2BDP58876 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.2□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.21□□□□□ -2.92
HIST1H2BDP58876 MT-TM-201ENST00000387377 68 ntBASIC-3.21□□□□□ -2.92
HIST1H2BDP58876 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.21□□□□□ -2.92
HIST1H2BDP58876 U4.2-201ENST00000618561 85 ntBASIC-3.21□□□□□ -2.92
HIST1H2BDP58876 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.21□□□□□ -2.92
HIST1H2BDP58876 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.22□□□□□ -2.92
HIST1H2BDP58876 RNY4P27-201ENST00000363341 96 ntBASIC-3.22□□□□□ -2.92
HIST1H2BDP58876 RNU6-789P-201ENST00000517105 102 ntBASIC-3.22□□□□□ -2.92
HIST1H2BDP58876 RNU6-255P-201ENST00000516957 105 ntBASIC-3.23□□□□□ -2.93
HIST1H2BDP58876 Y_RNA.178-201ENST00000363832 102 ntBASIC-3.24□□□□□ -2.93
HIST1H2BDP58876 RNU6-828P-201ENST00000364876 107 ntBASIC-3.24□□□□□ -2.93
HIST1H2BDP58876 RNY4P9-201ENST00000363194 97 ntBASIC-3.26□□□□□ -2.93
HIST1H2BDP58876 RNU6-119P-201ENST00000364882 107 ntBASIC-3.26□□□□□ -2.93
HIST1H2BDP58876 SNORA17.4-201ENST00000391287 132 ntBASIC-3.26□□□□□ -2.93
HIST1H2BDP58876 RNU6-1064P-201ENST00000410626 104 ntBASIC-3.26□□□□□ -2.93
HIST1H2BDP58876 MALAT1.1-201ENST00000618249 95 ntBASIC-3.26□□□□□ -2.93
HIST1H2BDP58876 AC006160.2-201ENST00000637708 154 ntBASIC-3.26□□□□□ -2.93
HIST1H2BDP58876 SNORD116-24-201ENST00000384549 92 ntBASIC-3.27□□□□□ -2.93
HIST1H2BDP58876 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.27□□□□□ -2.93
HIST1H2BDP58876 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.27□□□□□ -2.93
HIST1H2BDP58876 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.28□□□□□ -2.93
HIST1H2BDP58876 RNU6-361P-201ENST00000364454 107 ntBASIC-3.29□□□□□ -2.94
HIST1H2BDP58876 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.29□□□□□ -2.94
HIST1H2BDP58876 AP001094.1-201ENST00000579805 193 ntBASIC-3.29□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 606.8 ms