Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR601-201ENST00000385256 79 ntBASIC-1.14□□□□□ -2.59
HADHAP40939 MIR4306-201ENST00000583390 91 ntBASIC-1.14□□□□□ -2.59
HADHAP40939 MIR5683-201ENST00000636514 76 ntBASIC-1.14□□□□□ -2.59
HADHAP40939 RNU6-294P-201ENST00000364999 102 ntBASIC-1.15□□□□□ -2.59
HADHAP40939 MIR548Q-201ENST00000408404 100 ntBASIC-1.15□□□□□ -2.59
HADHAP40939 MIR1245B-201ENST00000636115 69 ntBASIC-1.15□□□□□ -2.59
HADHAP40939 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.16□□□□□ -2.6
HADHAP40939 RPL35AP4-201ENST00000412007 102 ntBASIC-1.16□□□□□ -2.6
HADHAP40939 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.16□□□□□ -2.6
HADHAP40939 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.16□□□□□ -2.6
HADHAP40939 MIR4712-201ENST00000583750 82 ntBASIC-1.16□□□□□ -2.6
HADHAP40939 MIR6818-201ENST00000621576 65 ntBASIC-1.16□□□□□ -2.6
HADHAP40939 MIR450A2-201ENST00000385022 100 ntBASIC-1.17□□□□□ -2.6
HADHAP40939 RNU6-70P-201ENST00000516438 60 ntBASIC-1.17□□□□□ -2.6
HADHAP40939 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.18□□□□□ -2.6
HADHAP40939 RNU6-598P-201ENST00000364017 105 ntBASIC-1.18□□□□□ -2.6
HADHAP40939 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.18□□□□□ -2.6
HADHAP40939 SNORD113-2-201ENST00000391082 72 ntBASIC-1.18□□□□□ -2.6
HADHAP40939 MIR5582-201ENST00000579697 68 ntBASIC-1.18□□□□□ -2.6
HADHAP40939 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.18□□□□□ -2.6
HADHAP40939 RNA5SP215-201ENST00000363440 122 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 RNU6-696P-201ENST00000390834 107 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 MIR4490-201ENST00000582647 84 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 MIR198-201ENST00000637333 62 ntBASIC-1.19□□□□□ -2.6
HADHAP40939 RNU6-242P-201ENST00000384359 107 ntBASIC-1.2□□□□□ -2.6
HADHAP40939 MIR29B1-201ENST00000385015 81 ntBASIC-1.2□□□□□ -2.6
HADHAP40939 MIR4723-201ENST00000585070 81 ntBASIC-1.2□□□□□ -2.6
HADHAP40939 RNU6-787P-201ENST00000384032 107 ntBASIC-1.21□□□□□ -2.6
HADHAP40939 U2.18-201ENST00000622185 84 ntBASIC-1.21□□□□□ -2.6
HADHAP40939 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.21□□□□□ -2.6
HADHAP40939 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.22□□□□□ -2.6
HADHAP40939 MIR154-201ENST00000385243 84 ntBASIC-1.22□□□□□ -2.6
HADHAP40939 MIR4666B-201ENST00000578142 81 ntBASIC-1.22□□□□□ -2.6
HADHAP40939 MIR3134-201ENST00000579433 74 ntBASIC-1.22□□□□□ -2.6
HADHAP40939 MIR429-201ENST00000362106 83 ntBASIC-1.23□□□□□ -2.61
HADHAP40939 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.23□□□□□ -2.61
HADHAP40939 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.23□□□□□ -2.61
HADHAP40939 SNORD116-24-201ENST00000384549 92 ntBASIC-1.23□□□□□ -2.61
HADHAP40939 RNA5SP192-201ENST00000364404 120 ntBASIC-1.24□□□□□ -2.61
HADHAP40939 SNORD115-31-201ENST00000365318 82 ntBASIC-1.24□□□□□ -2.61
HADHAP40939 SNORA41B-201ENST00000384785 128 ntBASIC-1.24□□□□□ -2.61
HADHAP40939 AC090616.4-201ENST00000448026 115 ntBASIC-1.24□□□□□ -2.61
HADHAP40939 MIR3115-201ENST00000577915 68 ntBASIC-1.24□□□□□ -2.61
HADHAP40939 MIR3165-201ENST00000579874 75 ntBASIC-1.24□□□□□ -2.61
HADHAP40939 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.25□□□□□ -2.61
HADHAP40939 RNU6-576P-201ENST00000390854 102 ntBASIC-1.25□□□□□ -2.61
HADHAP40939 RNU6-630P-201ENST00000391258 106 ntBASIC-1.25□□□□□ -2.61
HADHAP40939 MIR8485-201ENST00000401372 91 ntBASIC-1.25□□□□□ -2.61
HADHAP40939 RNU6-706P-201ENST00000517229 104 ntBASIC-1.25□□□□□ -2.61
HADHAP40939 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.25□□□□□ -2.61
HADHAP40939 AC062037.1-201ENST00000605302 128 ntBASIC-1.25□□□□□ -2.61
HADHAP40939 RNU6-895P-201ENST00000384125 103 ntBASIC-1.26□□□□□ -2.61
HADHAP40939 SNORD116-16-201ENST00000384533 92 ntBASIC-1.27□□□□□ -2.61
HADHAP40939 RNU6-820P-201ENST00000384273 107 ntBASIC-1.28□□□□□ -2.61
HADHAP40939 MIR520D-201ENST00000385002 87 ntBASIC-1.28□□□□□ -2.61
HADHAP40939 RNU6-687P-201ENST00000516443 89 ntBASIC-1.28□□□□□ -2.61
HADHAP40939 RNA5SP461-201ENST00000516451 104 ntBASIC-1.28□□□□□ -2.61
HADHAP40939 RNU6-164P-201ENST00000364604 103 ntBASIC-1.29□□□□□ -2.62
HADHAP40939 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.29□□□□□ -2.62
HADHAP40939 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.29□□□□□ -2.62
HADHAP40939 U4.2-201ENST00000618561 85 ntBASIC-1.29□□□□□ -2.62
HADHAP40939 MIR6874-201ENST00000635894 71 ntBASIC-1.29□□□□□ -2.62
HADHAP40939 AC138207.3-201ENST00000585289 166 ntBASIC-1.3□□□□□ -2.62
HADHAP40939 AC091912.2-201ENST00000624798 167 ntBASIC-1.3□□□□□ -2.62
HADHAP40939 RNU6-608P-201ENST00000383927 104 ntBASIC-1.31□□□□□ -2.62
HADHAP40939 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.31□□□□□ -2.62
HADHAP40939 RNA5SP173-201ENST00000364857 136 ntBASIC-1.32□□□□□ -2.62
HADHAP40939 SNORD1B-201ENST00000363091 84 ntBASIC-1.33□□□□□ -2.62
HADHAP40939 MIR889-201ENST00000401280 79 ntBASIC-1.33□□□□□ -2.62
HADHAP40939 HLA-S-202ENST00000425174 53 ntBASIC-1.33□□□□□ -2.62
HADHAP40939 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 MIR548AA1-201ENST00000384971 97 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 MIR3170-201ENST00000582699 77 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.34□□□□□ -2.62
HADHAP40939 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.35□□□□□ -2.63
HADHAP40939 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.35□□□□□ -2.63
HADHAP40939 RNU6-411P-201ENST00000384451 107 ntBASIC-1.36□□□□□ -2.63
HADHAP40939 MIR5591-201ENST00000578248 65 ntBASIC-1.36□□□□□ -2.63
HADHAP40939 U7.4-201ENST00000614961 63 ntBASIC-1.36□□□□□ -2.63
HADHAP40939 SNORD73B-201ENST00000364394 72 ntBASIC-1.37□□□□□ -2.63
HADHAP40939 RNU6-573P-201ENST00000383938 106 ntBASIC-1.37□□□□□ -2.63
HADHAP40939 MIR579-201ENST00000385221 98 ntBASIC-1.37□□□□□ -2.63
HADHAP40939 RNA5SP170-201ENST00000517150 101 ntBASIC-1.37□□□□□ -2.63
HADHAP40939 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.38□□□□□ -2.63
HADHAP40939 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
HADHAP40939 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.38□□□□□ -2.63
HADHAP40939 RNU7-151P-201ENST00000516930 53 ntBASIC-1.38□□□□□ -2.63
HADHAP40939 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.38□□□□□ -2.63
HADHAP40939 RNU6-542P-201ENST00000516405 103 ntBASIC-1.39□□□□□ -2.63
HADHAP40939 MIR4520-1-201ENST00000582609 70 ntBASIC-1.39□□□□□ -2.63
HADHAP40939 RNU6-258P-201ENST00000390884 101 ntBASIC-1.4□□□□□ -2.63
HADHAP40939 RNU6-172P-201ENST00000411000 93 ntBASIC-1.4□□□□□ -2.63
HADHAP40939 AC018880.2-201ENST00000414265 201 ntBASIC-1.4□□□□□ -2.63
HADHAP40939 MIR6502-201ENST00000617296 76 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms