Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-630P-201ENST00000391258 106 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 MIR1285-2-201ENST00000408311 88 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 RNA5SP89-201ENST00000410300 108 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 MIR4520-1-201ENST00000582609 70 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 MIR664A-201ENST00000626086 82 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 RNU6-330P-201ENST00000363015 107 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 RNU6-686P-201ENST00000364839 107 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 RNU6-844P-201ENST00000517175 102 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.26□□□□□ -2.61
SCN4AP35499 RNU6-79P-201ENST00000362511 107 ntBASIC-1.27□□□□□ -2.61
SCN4AP35499 RNU6-129P-201ENST00000391022 107 ntBASIC-1.27□□□□□ -2.61
SCN4AP35499 AC090616.4-201ENST00000448026 115 ntBASIC-1.27□□□□□ -2.61
SCN4AP35499 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.28□□□□□ -2.61
SCN4AP35499 SNORA63.4-201ENST00000362763 126 ntBASIC-1.28□□□□□ -2.61
SCN4AP35499 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.28□□□□□ -2.61
SCN4AP35499 HLA-S-202ENST00000425174 53 ntBASIC-1.28□□□□□ -2.61
SCN4AP35499 RNU7-151P-201ENST00000516930 53 ntBASIC-1.28□□□□□ -2.61
SCN4AP35499 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.29□□□□□ -2.62
SCN4AP35499 SNORD113-1-201ENST00000365321 69 ntBASIC-1.29□□□□□ -2.62
SCN4AP35499 MIR23C-201ENST00000579846 100 ntBASIC-1.29□□□□□ -2.62
SCN4AP35499 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.29□□□□□ -2.62
SCN4AP35499 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.3□□□□□ -2.62
SCN4AP35499 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.3□□□□□ -2.62
SCN4AP35499 MIR4441-201ENST00000582623 100 ntBASIC-1.3□□□□□ -2.62
SCN4AP35499 IGLL4P-201ENST00000614590 133 ntBASIC-1.3□□□□□ -2.62
SCN4AP35499 RNU6-640P-201ENST00000363693 105 ntBASIC-1.31□□□□□ -2.62
SCN4AP35499 SNORD116-16-201ENST00000384533 92 ntBASIC-1.31□□□□□ -2.62
SCN4AP35499 AC091912.2-201ENST00000624798 167 ntBASIC-1.31□□□□□ -2.62
SCN4AP35499 MIR488-201ENST00000365739 83 ntBASIC-1.32□□□□□ -2.62
SCN4AP35499 RNU6-732P-201ENST00000516033 103 ntBASIC-1.32□□□□□ -2.62
SCN4AP35499 SNORD45A-201ENST00000384512 84 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 MIR1245B-201ENST00000636115 69 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 RNU6-315P-201ENST00000362666 107 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 RNU6-402P-201ENST00000410678 103 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 RNU6-168P-201ENST00000516189 101 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 MIR548AI-201ENST00000579940 88 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 MIR6502-201ENST00000617296 76 ntBASIC-1.33□□□□□ -2.62
SCN4AP35499 RNU6-668P-201ENST00000364180 107 ntBASIC-1.34□□□□□ -2.62
SCN4AP35499 RNU6-49P-201ENST00000384256 107 ntBASIC-1.34□□□□□ -2.62
SCN4AP35499 RNU6-215P-201ENST00000365169 102 ntBASIC-1.35□□□□□ -2.63
SCN4AP35499 AC120024.2-201ENST00000576526 175 ntBASIC-1.36□□□□□ -2.63
SCN4AP35499 AC005520.4-201ENST00000604337 90 ntBASIC-1.36□□□□□ -2.63
SCN4AP35499 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.36□□□□□ -2.63
SCN4AP35499 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.36□□□□□ -2.63
SCN4AP35499 MIR548C-201ENST00000384815 97 ntBASIC-1.36□□□□□ -2.63
SCN4AP35499 U2.18-201ENST00000622185 84 ntBASIC-1.36□□□□□ -2.63
SCN4AP35499 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.37□□□□□ -2.63
SCN4AP35499 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.37□□□□□ -2.63
SCN4AP35499 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.37□□□□□ -2.63
SCN4AP35499 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.38□□□□□ -2.63
SCN4AP35499 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.38□□□□□ -2.63
SCN4AP35499 RNU6-294P-201ENST00000364999 102 ntBASIC-1.38□□□□□ -2.63
SCN4AP35499 RPL35AP4-201ENST00000412007 102 ntBASIC-1.38□□□□□ -2.63
SCN4AP35499 MIR3170-201ENST00000582699 77 ntBASIC-1.38□□□□□ -2.63
SCN4AP35499 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.39□□□□□ -2.63
SCN4AP35499 RNU6-406P-201ENST00000516470 107 ntBASIC-1.39□□□□□ -2.63
SCN4AP35499 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.39□□□□□ -2.63
SCN4AP35499 SNORA41B-201ENST00000384785 128 ntBASIC-1.4□□□□□ -2.63
SCN4AP35499 RNU6-604P-201ENST00000390917 100 ntBASIC-1.4□□□□□ -2.63
SCN4AP35499 U7.4-201ENST00000614961 63 ntBASIC-1.4□□□□□ -2.63
SCN4AP35499 RNU6-247P-201ENST00000362636 107 ntBASIC-1.4□□□□□ -2.63
SCN4AP35499 SNORA25.5-201ENST00000363782 126 ntBASIC-1.41□□□□□ -2.64
SCN4AP35499 RNU6-608P-201ENST00000383927 104 ntBASIC-1.41□□□□□ -2.64
SCN4AP35499 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.41□□□□□ -2.64
SCN4AP35499 RNU6-789P-201ENST00000517105 102 ntBASIC-1.41□□□□□ -2.64
SCN4AP35499 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.41□□□□□ -2.64
SCN4AP35499 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.42□□□□□ -2.64
SCN4AP35499 MIR5588-201ENST00000581890 63 ntBASIC-1.42□□□□□ -2.64
SCN4AP35499 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.43□□□□□ -2.64
SCN4AP35499 RNU6-820P-201ENST00000384273 107 ntBASIC-1.43□□□□□ -2.64
SCN4AP35499 RNA5SP173-201ENST00000364857 136 ntBASIC-1.43□□□□□ -2.64
SCN4AP35499 SNORD1B-201ENST00000363091 84 ntBASIC-1.44□□□□□ -2.64
SCN4AP35499 MIR1246-201ENST00000636535 73 ntBASIC-1.44□□□□□ -2.64
SCN4AP35499 RNU6-669P-201ENST00000365575 107 ntBASIC-1.45□□□□□ -2.64
SCN4AP35499 AL603908.1-201ENST00000406098 201 ntBASIC-1.45□□□□□ -2.64
SCN4AP35499 MIR6874-201ENST00000635894 71 ntBASIC-1.45□□□□□ -2.64
SCN4AP35499 RNU6-940P-201ENST00000363433 104 ntBASIC-1.45□□□□□ -2.64
SCN4AP35499 MIR4666B-201ENST00000578142 81 ntBASIC-1.45□□□□□ -2.64
SCN4AP35499 MIR7978-201ENST00000636158 59 ntBASIC-1.45□□□□□ -2.64
SCN4AP35499 SNORA27.2-201ENST00000363365 126 ntBASIC-1.46□□□□□ -2.64
SCN4AP35499 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.47□□□□□ -2.64
SCN4AP35499 SNORD60-201ENST00000383903 83 ntBASIC-1.47□□□□□ -2.64
SCN4AP35499 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.47□□□□□ -2.64
SCN4AP35499 RNU6-400P-201ENST00000391173 106 ntBASIC-1.47□□□□□ -2.64
SCN4AP35499 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.47□□□□□ -2.64
SCN4AP35499 RNU6-598P-201ENST00000364017 105 ntBASIC-1.47□□□□□ -2.65
SCN4AP35499 MIR520D-201ENST00000385002 87 ntBASIC-1.47□□□□□ -2.65
SCN4AP35499 RNA5SP180-201ENST00000516181 101 ntBASIC-1.47□□□□□ -2.65
SCN4AP35499 MIR4484-201ENST00000582855 83 ntBASIC-1.47□□□□□ -2.65
SCN4AP35499 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.48□□□□□ -2.65
SCN4AP35499 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.48□□□□□ -2.65
SCN4AP35499 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.49□□□□□ -2.65
SCN4AP35499 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.49□□□□□ -2.65
SCN4AP35499 RNU6-92P-201ENST00000605893 104 ntBASIC-1.49□□□□□ -2.65
SCN4AP35499 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.49□□□□□ -2.65
SCN4AP35499 SNORD116-24-201ENST00000384549 92 ntBASIC-1.5□□□□□ -2.65
SCN4AP35499 MIR1255A-201ENST00000408338 113 ntBASIC-1.5□□□□□ -2.65
SCN4AP35499 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms