Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 RNU6-458P-201ENST00000384179 107 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
KRT3P12035 SNORD19-201ENST00000391191 68 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 RNU6-406P-201ENST00000516470 107 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 MIR4770-201ENST00000579149 58 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 MIR548AI-201ENST00000579940 88 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 MIR4490-201ENST00000582647 84 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 MIR4484-201ENST00000582855 83 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 U6.58-201ENST00000613107 107 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 MIR8053-201ENST00000613344 75 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 IGLL4P-201ENST00000614590 133 ntBASIC-0.62□□□□□ -2.51
KRT3P12035 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.63□□□□□ -2.51
KRT3P12035 RNU6-587P-201ENST00000391282 106 ntBASIC-0.63□□□□□ -2.51
KRT3P12035 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.63□□□□□ -2.51
KRT3P12035 AC090616.4-201ENST00000448026 115 ntBASIC-0.63□□□□□ -2.51
KRT3P12035 RNU6-168P-201ENST00000516189 101 ntBASIC-0.63□□□□□ -2.51
KRT3P12035 MIR5683-201ENST00000636514 76 ntBASIC-0.63□□□□□ -2.51
KRT3P12035 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 RNA5SP215-201ENST00000363440 122 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 RNY1P1-201ENST00000364372 112 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 RNU6-164P-201ENST00000364604 103 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 RNU6-44P-201ENST00000384045 107 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 RNU6-696P-201ENST00000390834 107 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 MIR5588-201ENST00000581890 63 ntBASIC-0.64□□□□□ -2.51
KRT3P12035 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 RNU6-979P-201ENST00000383896 107 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 RNU6-49P-201ENST00000384256 107 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 MIR487B-201ENST00000385021 84 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 RNA5SP86-201ENST00000390869 98 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 RNA5SP89-201ENST00000410300 108 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 MIR548V-201ENST00000584165 80 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 U4.4-201ENST00000620626 117 ntBASIC-0.65□□□□□ -2.51
KRT3P12035 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 SNORD113.1-201ENST00000363280 73 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 RNU6-668P-201ENST00000364180 107 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 RNA5SP173-201ENST00000364857 136 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 MIR548Q-201ENST00000408404 100 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 MIR1246-201ENST00000636535 73 ntBASIC-0.66□□□□□ -2.52
KRT3P12035 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.67□□□□□ -2.52
KRT3P12035 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.67□□□□□ -2.52
KRT3P12035 SNORD113-2-201ENST00000391082 72 ntBASIC-0.67□□□□□ -2.52
KRT3P12035 RNU7-171P-201ENST00000459581 62 ntBASIC-0.67□□□□□ -2.52
KRT3P12035 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.67□□□□□ -2.52
KRT3P12035 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.67□□□□□ -2.52
KRT3P12035 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.68□□□□□ -2.52
KRT3P12035 SNORD45A-201ENST00000384512 84 ntBASIC-0.68□□□□□ -2.52
KRT3P12035 RNU6-540P-201ENST00000384622 101 ntBASIC-0.68□□□□□ -2.52
KRT3P12035 MIR630-201ENST00000384957 97 ntBASIC-0.68□□□□□ -2.52
KRT3P12035 RNU6-598P-201ENST00000364017 105 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 SNORD116-16-201ENST00000384533 92 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 MIR548H1-201ENST00000408610 102 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 MIR4712-201ENST00000583750 82 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 MIR664A-201ENST00000626086 82 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 MIR1245B-201ENST00000636115 69 ntBASIC-0.69□□□□□ -2.52
KRT3P12035 RNU6-153P-201ENST00000364422 104 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 RNU6-242P-201ENST00000384359 107 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 MIR520D-201ENST00000385002 87 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 RNY4P30-201ENST00000410216 95 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 RNU6-983P-201ENST00000516004 103 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.7□□□□□ -2.52
KRT3P12035 RNU6-228P-201ENST00000362700 106 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 RNU6-608P-201ENST00000383927 104 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 MIR154-201ENST00000385243 84 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 RNU6-630P-201ENST00000391258 106 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 AC018880.2-201ENST00000414265 201 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 RNU6-70P-201ENST00000516438 60 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 U2.22-201ENST00000636441 106 ntBASIC-0.71□□□□□ -2.52
KRT3P12035 RNU6-79P-201ENST00000362511 107 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 SNORD18.1-201ENST00000363807 70 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 RNU6-895P-201ENST00000384125 103 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 MIR548AA1-201ENST00000384971 97 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 MIR450A2-201ENST00000385022 100 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 MIR23C-201ENST00000579846 100 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 U2.18-201ENST00000622185 84 ntBASIC-0.72□□□□□ -2.52
KRT3P12035 MIR494-201ENST00000349529 81 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 RNU6-563P-201ENST00000364872 108 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 RNU6-294P-201ENST00000364999 102 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 RNU6-400P-201ENST00000391173 106 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 MIR4666B-201ENST00000578142 81 ntBASIC-0.73□□□□□ -2.53
KRT3P12035 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms