Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNORA40-201ENST00000388090 126 ntBASIC-3.4□□□□□ -2.95
CXCL1P09341 AC093729.1-201ENST00000513074 128 ntBASIC-3.4□□□□□ -2.95
CXCL1P09341 RNY4P9-201ENST00000363194 97 ntBASIC-3.41□□□□□ -2.96
CXCL1P09341 RNU6-804P-201ENST00000384286 107 ntBASIC-3.41□□□□□ -2.96
CXCL1P09341 RNU6-686P-201ENST00000364839 107 ntBASIC-3.42□□□□□ -2.96
CXCL1P09341 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.42□□□□□ -2.96
CXCL1P09341 MIR590-201ENST00000385008 97 ntBASIC-3.42□□□□□ -2.96
CXCL1P09341 SNORD60-201ENST00000383903 83 ntBASIC-3.43□□□□□ -2.96
CXCL1P09341 MIR8053-201ENST00000613344 75 ntBASIC-3.43□□□□□ -2.96
CXCL1P09341 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.44□□□□□ -2.96
CXCL1P09341 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.44□□□□□ -2.96
CXCL1P09341 MIR579-201ENST00000385221 98 ntBASIC-3.44□□□□□ -2.96
CXCL1P09341 RNU6-172P-201ENST00000411000 93 ntBASIC-3.44□□□□□ -2.96
CXCL1P09341 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.44□□□□□ -2.96
CXCL1P09341 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.45□□□□□ -2.96
CXCL1P09341 AC008737.2-201ENST00000599446 118 ntBASIC-3.45□□□□□ -2.96
CXCL1P09341 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.46□□□□□ -2.96
CXCL1P09341 MIR1302-5-201ENST00000408164 150 ntBASIC-3.46□□□□□ -2.96
CXCL1P09341 MIR548N-201ENST00000408742 75 ntBASIC-3.46□□□□□ -2.96
CXCL1P09341 RNU6-402P-201ENST00000410678 103 ntBASIC-3.46□□□□□ -2.96
CXCL1P09341 MIR581-201ENST00000384895 96 ntBASIC-3.47□□□□□ -2.96
CXCL1P09341 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.47□□□□□ -2.96
CXCL1P09341 RNU6-659P-201ENST00000516454 104 ntBASIC-3.47□□□□□ -2.96
CXCL1P09341 MIR1297-201ENST00000637311 77 ntBASIC-3.47□□□□□ -2.96
CXCL1P09341 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.48□□□□□ -2.97
CXCL1P09341 MIR568-201ENST00000385036 95 ntBASIC-3.48□□□□□ -2.97
CXCL1P09341 RNU7-160P-201ENST00000516660 62 ntBASIC-3.48□□□□□ -2.97
CXCL1P09341 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.49□□□□□ -2.97
CXCL1P09341 SNORD113.1-201ENST00000363280 73 ntBASIC-3.49□□□□□ -2.97
CXCL1P09341 RNU6-200P-201ENST00000364743 107 ntBASIC-3.49□□□□□ -2.97
CXCL1P09341 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.49□□□□□ -2.97
CXCL1P09341 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.49□□□□□ -2.97
CXCL1P09341 RNU6-520P-201ENST00000384717 104 ntBASIC-3.49□□□□□ -2.97
CXCL1P09341 MIR4668-201ENST00000582284 70 ntBASIC-3.5□□□□□ -2.97
CXCL1P09341 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.51□□□□□ -2.97
CXCL1P09341 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.51□□□□□ -2.97
CXCL1P09341 SNORD116-21-201ENST00000384507 92 ntBASIC-3.51□□□□□ -2.97
CXCL1P09341 RNU6-257P-201ENST00000410238 98 ntBASIC-3.51□□□□□ -2.97
CXCL1P09341 RNU6-974P-201ENST00000384099 108 ntBASIC-3.52□□□□□ -2.97
CXCL1P09341 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.52□□□□□ -2.97
CXCL1P09341 MIR606-201ENST00000384851 96 ntBASIC-3.52□□□□□ -2.97
CXCL1P09341 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.52□□□□□ -2.97
CXCL1P09341 AC004792.1-201ENST00000614523 137 ntBASIC-3.52□□□□□ -2.97
CXCL1P09341 RNU6-755P-201ENST00000364400 103 ntBASIC-3.53□□□□□ -2.97
CXCL1P09341 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.54□□□□□ -2.98
CXCL1P09341 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.54□□□□□ -2.98
CXCL1P09341 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.54□□□□□ -2.98
CXCL1P09341 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.55□□□□□ -2.98
CXCL1P09341 RNU6-109P-201ENST00000516364 107 ntBASIC-3.55□□□□□ -2.98
CXCL1P09341 RNU6-184P-201ENST00000516514 107 ntBASIC-3.55□□□□□ -2.98
CXCL1P09341 MTND5P41-201ENST00000517498 206 ntBASIC-3.55□□□□□ -2.98
CXCL1P09341 MIR202-201ENST00000362219 110 ntBASIC-3.56□□□□□ -2.98
CXCL1P09341 SNORA63.4-201ENST00000362763 126 ntBASIC-3.56□□□□□ -2.98
CXCL1P09341 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.56□□□□□ -2.98
CXCL1P09341 RNU6-649P-201ENST00000384463 107 ntBASIC-3.56□□□□□ -2.98
CXCL1P09341 RNU6-361P-201ENST00000364454 107 ntBASIC-3.57□□□□□ -2.98
CXCL1P09341 RNU6-828P-201ENST00000364876 107 ntBASIC-3.57□□□□□ -2.98
CXCL1P09341 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.57□□□□□ -2.98
CXCL1P09341 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.57□□□□□ -2.98
CXCL1P09341 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.58□□□□□ -2.98
CXCL1P09341 SNORA17.4-201ENST00000391287 132 ntBASIC-3.58□□□□□ -2.98
CXCL1P09341 RNU6-971P-201ENST00000516920 106 ntBASIC-3.58□□□□□ -2.98
CXCL1P09341 MIR4801-201ENST00000582704 82 ntBASIC-3.58□□□□□ -2.98
CXCL1P09341 RNU6-738P-201ENST00000384531 106 ntBASIC-3.59□□□□□ -2.98
CXCL1P09341 AL353621.2-201ENST00000605340 133 ntBASIC-3.59□□□□□ -2.98
CXCL1P09341 MIR379-201ENST00000362218 67 ntBASIC-3.6□□□□□ -2.99
CXCL1P09341 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.6□□□□□ -2.99
CXCL1P09341 RNU6-497P-201ENST00000365316 104 ntBASIC-3.6□□□□□ -2.99
CXCL1P09341 RNU6-380P-201ENST00000410207 107 ntBASIC-3.6□□□□□ -2.99
CXCL1P09341 RNU6-141P-201ENST00000410499 105 ntBASIC-3.6□□□□□ -2.99
CXCL1P09341 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.61□□□□□ -2.99
CXCL1P09341 RNU6-834P-201ENST00000362367 110 ntBASIC-3.62□□□□□ -2.99
CXCL1P09341 SNORD45A-201ENST00000384512 84 ntBASIC-3.62□□□□□ -2.99
CXCL1P09341 RNU6-789P-201ENST00000517105 102 ntBASIC-3.62□□□□□ -2.99
CXCL1P09341 MIR4484-201ENST00000582855 83 ntBASIC-3.62□□□□□ -2.99
CXCL1P09341 SNORD113-3-201ENST00000364830 72 ntBASIC-3.63□□□□□ -2.99
CXCL1P09341 SNORA19-201ENST00000384737 128 ntBASIC-3.63□□□□□ -2.99
CXCL1P09341 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.63□□□□□ -2.99
CXCL1P09341 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.64□□□□□ -2.99
CXCL1P09341 SNORD116-22-201ENST00000384430 92 ntBASIC-3.64□□□□□ -2.99
CXCL1P09341 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.64□□□□□ -2.99
CXCL1P09341 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.64□□□□□ -2.99
CXCL1P09341 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.65□□□□□ -2.99
CXCL1P09341 RNU6-106P-201ENST00000384405 107 ntBASIC-3.65□□□□□ -2.99
CXCL1P09341 RNU6-554P-201ENST00000410466 106 ntBASIC-3.65□□□□□ -2.99
CXCL1P09341 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.65□□□□□ -2.99
CXCL1P09341 MIR548BB-201ENST00000626714 66 ntBASIC-3.66□□□□□ -3
CXCL1P09341 MIR2052-201ENST00000636055 55 ntBASIC-3.66□□□□□ -3
CXCL1P09341 RNU6-219P-201ENST00000364728 107 ntBASIC-3.67□□□□□ -3
CXCL1P09341 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.67□□□□□ -3
CXCL1P09341 RNU7-200P-201ENST00000516105 62 ntBASIC-3.68□□□□□ -3
CXCL1P09341 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.68□□□□□ -3
CXCL1P09341 RNU6-803P-201ENST00000516034 102 ntBASIC-3.69□□□□□ -3
CXCL1P09341 MIR7110-201ENST00000612638 86 ntBASIC-3.69□□□□□ -3
CXCL1P09341 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.7□□□□□ -3
CXCL1P09341 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.71□□□□□ -3
CXCL1P09341 RNU6-694P-201ENST00000364071 147 ntBASIC-3.72□□□□□ -3
CXCL1P09341 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.73□□□□□ -3.01
CXCL1P09341 MIR4503-201ENST00000582187 83 ntBASIC-3.73□□□□□ -3.01
CXCL1P09341 RNU6-92P-201ENST00000605893 104 ntBASIC-3.73□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms