Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.84□□□□□ -2.7
SNRPAP09012 RNU6-118P-201ENST00000516552 102 ntBASIC-1.84□□□□□ -2.7
SNRPAP09012 MIR4484-201ENST00000582855 83 ntBASIC-1.84□□□□□ -2.7
SNRPAP09012 SNORD1B-201ENST00000363091 84 ntBASIC-1.85□□□□□ -2.71
SNRPAP09012 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.85□□□□□ -2.71
SNRPAP09012 RNY1P5-201ENST00000383890 115 ntBASIC-1.85□□□□□ -2.71
SNRPAP09012 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.85□□□□□ -2.71
SNRPAP09012 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.86□□□□□ -2.71
SNRPAP09012 SNORA41B-201ENST00000384785 128 ntBASIC-1.86□□□□□ -2.71
SNRPAP09012 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 RNA5SP173-201ENST00000364857 136 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 SNORD116-22-201ENST00000384430 92 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 MIR579-201ENST00000385221 98 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.87□□□□□ -2.71
SNRPAP09012 SNORD63.2-201ENST00000516303 64 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 RNU7-151P-201ENST00000516930 53 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 AC013734.1-201ENST00000619329 111 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 MIR664B-201ENST00000626756 61 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 U6.97-201ENST00000636904 101 ntBASIC-1.87□□□□□ -2.71
SNRPAP09012 SNORD113.1-201ENST00000363280 73 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 MIR496-201ENST00000385226 102 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 RNY4P18-201ENST00000391107 89 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 RNU6-267P-201ENST00000516714 103 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 RNU6-980P-201ENST00000516925 103 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 MIR548BB-201ENST00000626714 66 ntBASIC-1.88□□□□□ -2.71
SNRPAP09012 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.88□□□□□ -2.71
SNRPAP09012 SNORA27.2-201ENST00000363365 126 ntBASIC-1.89□□□□□ -2.71
SNRPAP09012 RNU6-129P-201ENST00000391022 107 ntBASIC-1.89□□□□□ -2.71
SNRPAP09012 RNU6-402P-201ENST00000410678 103 ntBASIC-1.89□□□□□ -2.71
SNRPAP09012 RNU4-88P-201ENST00000411220 86 ntBASIC-1.89□□□□□ -2.71
SNRPAP09012 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.89□□□□□ -2.71
SNRPAP09012 RNU6-219P-201ENST00000364728 107 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 RNU6-669P-201ENST00000365575 107 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 AC005520.4-201ENST00000604337 90 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 MIR8053-201ENST00000613344 75 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 MIR2052-201ENST00000636055 55 ntBASIC-1.9□□□□□ -2.71
SNRPAP09012 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
SNRPAP09012 SNORD45A-201ENST00000384512 84 ntBASIC-1.91□□□□□ -2.72
SNRPAP09012 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.91□□□□□ -2.72
SNRPAP09012 MIR1297-201ENST00000637311 77 ntBASIC-1.91□□□□□ -2.72
SNRPAP09012 AC099654.10-201ENST00000640395 161 ntBASIC-1.91□□□□□ -2.72
SNRPAP09012 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.92□□□□□ -2.72
SNRPAP09012 RNU6-497P-201ENST00000365316 104 ntBASIC-1.93□□□□□ -2.72
SNRPAP09012 RNU6-172P-201ENST00000411000 93 ntBASIC-1.93□□□□□ -2.72
SNRPAP09012 RNY3P8-201ENST00000411366 126 ntBASIC-1.93□□□□□ -2.72
SNRPAP09012 RNU6-380P-201ENST00000410207 107 ntBASIC-1.94□□□□□ -2.72
SNRPAP09012 MIR7978-201ENST00000636158 59 ntBASIC-1.94□□□□□ -2.72
SNRPAP09012 SNORA63.4-201ENST00000362763 126 ntBASIC-1.95□□□□□ -2.72
SNRPAP09012 MIR664A-201ENST00000626086 82 ntBASIC-1.95□□□□□ -2.72
SNRPAP09012 SNORD115-31-201ENST00000365318 82 ntBASIC-1.96□□□□□ -2.72
SNRPAP09012 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.96□□□□□ -2.72
SNRPAP09012 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.96□□□□□ -2.72
SNRPAP09012 RNU6-523P-201ENST00000516304 54 ntBASIC-1.96□□□□□ -2.72
SNRPAP09012 MIR3139-201ENST00000579145 76 ntBASIC-1.96□□□□□ -2.72
SNRPAP09012 AP001318.4-201ENST00000616637 121 ntBASIC-1.96□□□□□ -2.72
SNRPAP09012 MALAT1.1-201ENST00000618249 95 ntBASIC-1.96□□□□□ -2.72
SNRPAP09012 RNU6-755P-201ENST00000364400 103 ntBASIC-1.97□□□□□ -2.72
SNRPAP09012 snoU13.10-201ENST00000459301 103 ntBASIC-1.97□□□□□ -2.72
SNRPAP09012 RNU6-194P-201ENST00000363862 105 ntBASIC-1.98□□□□□ -2.73
SNRPAP09012 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.98□□□□□ -2.73
SNRPAP09012 MIR548W-201ENST00000581970 74 ntBASIC-1.98□□□□□ -2.73
SNRPAP09012 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.98□□□□□ -2.73
SNRPAP09012 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.98□□□□□ -2.73
SNRPAP09012 MIR450A1-201ENST00000362262 91 ntBASIC-1.99□□□□□ -2.73
SNRPAP09012 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.99□□□□□ -2.73
SNRPAP09012 RNU6-974P-201ENST00000384099 108 ntBASIC-1.99□□□□□ -2.73
SNRPAP09012 MIR125B1-201ENST00000385236 88 ntBASIC-1.99□□□□□ -2.73
SNRPAP09012 RNU6-589P-201ENST00000516485 107 ntBASIC-1.99□□□□□ -2.73
SNRPAP09012 AC006160.2-201ENST00000637708 154 ntBASIC-1.99□□□□□ -2.73
SNRPAP09012 Y_RNA.139-201ENST00000363464 102 ntBASIC-2□□□□□ -2.73
SNRPAP09012 Y_RNA.321-201ENST00000365149 102 ntBASIC-2□□□□□ -2.73
SNRPAP09012 AC008267.6-201ENST00000441664 139 ntBASIC-2□□□□□ -2.73
SNRPAP09012 AL031737.1-201ENST00000450125 223 ntBASIC-2□□□□□ -2.73
SNRPAP09012 AC090425.1-201ENST00000610007 140 ntBASIC-2□□□□□ -2.73
SNRPAP09012 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.01□□□□□ -2.73
SNRPAP09012 SNORA40.13-201ENST00000516379 120 ntBASIC-2.01□□□□□ -2.73
SNRPAP09012 SNORD18C-201ENST00000362704 69 ntBASIC-2.02□□□□□ -2.73
SNRPAP09012 RNA5SP405-201ENST00000363059 114 ntBASIC-2.02□□□□□ -2.73
SNRPAP09012 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.02□□□□□ -2.73
SNRPAP09012 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.02□□□□□ -2.73
SNRPAP09012 MT-TM-201ENST00000387377 68 ntBASIC-2.02□□□□□ -2.73
SNRPAP09012 SNORD54-201ENST00000459159 67 ntBASIC-2.02□□□□□ -2.73
SNRPAP09012 RNU6-959P-201ENST00000384671 107 ntBASIC-2.03□□□□□ -2.73
SNRPAP09012 RNU6-789P-201ENST00000517105 102 ntBASIC-2.03□□□□□ -2.73
SNRPAP09012 AL365222.1-201ENST00000614661 98 ntBASIC-2.03□□□□□ -2.73
SNRPAP09012 RNU6-520P-201ENST00000384717 104 ntBASIC-2.04□□□□□ -2.74
SNRPAP09012 RNU6-895P-201ENST00000384125 103 ntBASIC-2.05□□□□□ -2.74
SNRPAP09012 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.05□□□□□ -2.74
SNRPAP09012 MIR3133-201ENST00000583157 78 ntBASIC-2.05□□□□□ -2.74
SNRPAP09012 MIR202-201ENST00000362219 110 ntBASIC-2.06□□□□□ -2.74
SNRPAP09012 SNORD60-201ENST00000383903 83 ntBASIC-2.06□□□□□ -2.74
SNRPAP09012 RNU6-675P-201ENST00000384236 104 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms