Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SNORA8.1-201ENST00000384250 140 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 U6.58-201ENST00000613107 107 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 MIR548BB-201ENST00000626714 66 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 RNU6-164P-201ENST00000364604 103 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 RNU6-303P-201ENST00000517091 106 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 MALAT1.1-201ENST00000618249 95 ntBASIC-1.62□□□□□ -2.67
SIX3O95343 RNU6-478P-201ENST00000363904 110 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 RNU6-686P-201ENST00000364839 107 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 AP001318.4-201ENST00000616637 121 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 RNA5SP86-201ENST00000390869 98 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 AC090616.4-201ENST00000448026 115 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 MIR548H1-201ENST00000408610 102 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 RNU7-174P-201ENST00000516248 59 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 MIR3910-1-201ENST00000580936 111 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.66□□□□□ -2.68
SIX3O95343 RNU6-219P-201ENST00000364728 107 ntBASIC-1.66□□□□□ -2.68
SIX3O95343 MIR630-201ENST00000384957 97 ntBASIC-1.66□□□□□ -2.68
SIX3O95343 RNU6-129P-201ENST00000391022 107 ntBASIC-1.67□□□□□ -2.68
SIX3O95343 RNY4P18-201ENST00000391107 89 ntBASIC-1.67□□□□□ -2.68
SIX3O95343 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.67□□□□□ -2.68
SIX3O95343 MIR429-201ENST00000362106 83 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
SIX3O95343 RNU6-696P-201ENST00000390834 107 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-630P-201ENST00000391258 106 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-380P-201ENST00000410207 107 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-557P-201ENST00000516842 110 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-32P-201ENST00000383948 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-13P-201ENST00000384248 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-12P-201ENST00000384604 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-41P-201ENST00000384741 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 MTND4LP1-201ENST00000446263 157 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-668P-201ENST00000364180 107 ntBASIC-1.71□□□□□ -2.68
SIX3O95343 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.71□□□□□ -2.68
SIX3O95343 MIR664B-201ENST00000626756 61 ntBASIC-1.71□□□□□ -2.68
SIX3O95343 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 RNU6-598P-201ENST00000364017 105 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 RNU6-587P-201ENST00000391282 106 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 AC018880.2-201ENST00000414265 201 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 RNU6-698P-201ENST00000363523 107 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 RNU6-34P-201ENST00000364874 107 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 AC074348.1-201ENST00000426503 132 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 RNU6-168P-201ENST00000516189 101 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 U2.18-201ENST00000622185 84 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 AC006160.2-201ENST00000637708 154 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 MIR488-201ENST00000365739 83 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 U4.4-201ENST00000620626 117 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 SNORA63.4-201ENST00000362763 126 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 RNA5SP405-201ENST00000363059 114 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 AC108019.1-201ENST00000512540 175 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 MIR4756-201ENST00000577874 78 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 MIR664A-201ENST00000626086 82 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 AL606753.1-201ENST00000427435 87 ntBASIC-1.76□□□□□ -2.69
SIX3O95343 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.76□□□□□ -2.69
SIX3O95343 IGLL4P-201ENST00000614590 133 ntBASIC-1.76□□□□□ -2.69
SIX3O95343 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.77□□□□□ -2.69
SIX3O95343 SNORD45A-201ENST00000384512 84 ntBASIC-1.77□□□□□ -2.69
SIX3O95343 MIR487B-201ENST00000385021 84 ntBASIC-1.77□□□□□ -2.69
SIX3O95343 SNORD113.1-201ENST00000363280 73 ntBASIC-1.78□□□□□ -2.69
SIX3O95343 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.78□□□□□ -2.69
SIX3O95343 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.78□□□□□ -2.69
SIX3O95343 MIR1297-201ENST00000637311 77 ntBASIC-1.78□□□□□ -2.69
SIX3O95343 RNU6-755P-201ENST00000364400 103 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 SNORD113-2-201ENST00000391082 72 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 RNU6-400P-201ENST00000391173 106 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.8□□□□□ -2.7
SIX3O95343 RNU6-608P-201ENST00000383927 104 ntBASIC-1.8□□□□□ -2.7
SIX3O95343 RNU6-844P-201ENST00000517175 102 ntBASIC-1.8□□□□□ -2.7
SIX3O95343 RNU6-230P-201ENST00000362457 104 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNU6-79P-201ENST00000362511 107 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNY1P1-201ENST00000364372 112 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 MIR8053-201ENST00000613344 75 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNU6-247P-201ENST00000362636 107 ntBASIC-1.82□□□□□ -2.7
SIX3O95343 RNU6-497P-201ENST00000365316 104 ntBASIC-1.82□□□□□ -2.7
SIX3O95343 MIR520D-201ENST00000385002 87 ntBASIC-1.82□□□□□ -2.7
SIX3O95343 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.83□□□□□ -2.7
SIX3O95343 RNA5SP215-201ENST00000363440 122 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 RNU6-640P-201ENST00000363693 105 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 RNU6-194P-201ENST00000363862 105 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.85□□□□□ -2.71
SIX3O95343 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.85□□□□□ -2.71
SIX3O95343 RNU6-147P-201ENST00000383983 107 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms