Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 SNORD18.2-201ENST00000459604 70 ntBASIC1.26□□□□□ -2.21
PITPNM1O00562 SNORD45C-201ENST00000383893 79 ntBASIC1.25□□□□□ -2.21
PITPNM1O00562 RNU6-110P-201ENST00000384508 104 ntBASIC1.25□□□□□ -2.21
PITPNM1O00562 RNU6-127P-201ENST00000390897 107 ntBASIC1.25□□□□□ -2.21
PITPNM1O00562 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.25□□□□□ -2.21
PITPNM1O00562 U6.97-201ENST00000636904 101 ntBASIC1.25□□□□□ -2.21
PITPNM1O00562 SNORD114-26-201ENST00000363543 72 ntBASIC1.24□□□□□ -2.21
PITPNM1O00562 MIR548AJ2-201ENST00000408539 92 ntBASIC1.24□□□□□ -2.21
PITPNM1O00562 Y_RNA.603-201ENST00000410571 108 ntBASIC1.24□□□□□ -2.21
PITPNM1O00562 FTX_4.1-201ENST00000616291 147 ntBASIC1.24□□□□□ -2.21
PITPNM1O00562 RNU6-929P-201ENST00000384429 107 ntBASIC1.23□□□□□ -2.21
PITPNM1O00562 PVT1_3.1-201ENST00000620853 95 ntBASIC1.23□□□□□ -2.21
PITPNM1O00562 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
PITPNM1O00562 SNORD44.1-201ENST00000363202 61 ntBASIC1.21□□□□□ -2.22
PITPNM1O00562 MIR598-201ENST00000384868 97 ntBASIC1.2□□□□□ -2.22
PITPNM1O00562 SNORD18C-201ENST00000362704 69 ntBASIC1.19□□□□□ -2.22
PITPNM1O00562 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
PITPNM1O00562 SNORD74.6-201ENST00000364796 70 ntBASIC1.18□□□□□ -2.22
PITPNM1O00562 RNU6-695P-201ENST00000391157 104 ntBASIC1.18□□□□□ -2.22
PITPNM1O00562 RNU6-1169P-201ENST00000363537 103 ntBASIC1.17□□□□□ -2.22
PITPNM1O00562 RNU6-180P-201ENST00000516697 61 ntBASIC1.17□□□□□ -2.22
PITPNM1O00562 MIR373-201ENST00000362273 69 ntBASIC1.16□□□□□ -2.22
PITPNM1O00562 RNA5SP163-201ENST00000410304 99 ntBASIC1.16□□□□□ -2.22
PITPNM1O00562 MIR4280-201ENST00000582178 76 ntBASIC1.16□□□□□ -2.22
PITPNM1O00562 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
PITPNM1O00562 MIR507-201ENST00000385234 94 ntBASIC1.15□□□□□ -2.23
PITPNM1O00562 AL445193.1-201ENST00000441183 141 ntBASIC1.15□□□□□ -2.23
PITPNM1O00562 AC120024.2-201ENST00000576526 175 ntBASIC1.14□□□□□ -2.23
PITPNM1O00562 MIR6857-201ENST00000613267 93 ntBASIC1.14□□□□□ -2.23
PITPNM1O00562 MIR6779-201ENST00000617283 64 ntBASIC1.14□□□□□ -2.23
PITPNM1O00562 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.13□□□□□ -2.23
PITPNM1O00562 RNU6-563P-201ENST00000364872 108 ntBASIC1.12□□□□□ -2.23
PITPNM1O00562 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
PITPNM1O00562 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
PITPNM1O00562 MIR5087-201ENST00000635826 76 ntBASIC1.12□□□□□ -2.23
PITPNM1O00562 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
PITPNM1O00562 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
PITPNM1O00562 MIR892B-201ENST00000401279 77 ntBASIC1.11□□□□□ -2.23
PITPNM1O00562 AC244250.2-201ENST00000418731 148 ntBASIC1.11□□□□□ -2.23
PITPNM1O00562 MIR5000-201ENST00000577717 103 ntBASIC1.11□□□□□ -2.23
PITPNM1O00562 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
PITPNM1O00562 MIR6851-201ENST00000617060 67 ntBASIC1.1□□□□□ -2.23
PITPNM1O00562 CYP3A137P-201ENST00000562436 69 ntBASIC1.08□□□□□ -2.24
PITPNM1O00562 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
PITPNM1O00562 Y_RNA.781-201ENST00000620301 103 ntBASIC1.07□□□□□ -2.24
PITPNM1O00562 RNU6-912P-201ENST00000363800 104 ntBASIC1.06□□□□□ -2.24
PITPNM1O00562 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PITPNM1O00562 SNORD38.3-201ENST00000516599 73 ntBASIC1.06□□□□□ -2.24
PITPNM1O00562 RNA5SP436-201ENST00000516020 115 ntBASIC1.05□□□□□ -2.24
PITPNM1O00562 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1.05□□□□□ -2.24
PITPNM1O00562 MIR103A1-201ENST00000362165 78 ntBASIC1.04□□□□□ -2.24
PITPNM1O00562 SNORD114-17-201ENST00000364699 75 ntBASIC1.04□□□□□ -2.24
PITPNM1O00562 MIR548H2-201ENST00000408874 88 ntBASIC1.04□□□□□ -2.24
PITPNM1O00562 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC1.04□□□□□ -2.24
PITPNM1O00562 RNU6-815P-201ENST00000384080 113 ntBASIC1.03□□□□□ -2.24
PITPNM1O00562 MIR656-201ENST00000385224 78 ntBASIC1.03□□□□□ -2.24
PITPNM1O00562 AC090616.4-201ENST00000448026 115 ntBASIC1.03□□□□□ -2.24
PITPNM1O00562 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
PITPNM1O00562 MIR518B-201ENST00000385127 83 ntBASIC1.01□□□□□ -2.25
PITPNM1O00562 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
PITPNM1O00562 SNORD22.1-201ENST00000516331 125 ntBASIC1□□□□□ -2.25
PITPNM1O00562 MIR655-201ENST00000362159 97 ntBASIC0.99□□□□□ -2.25
PITPNM1O00562 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
PITPNM1O00562 SNORD75.1-201ENST00000408373 60 ntBASIC0.98□□□□□ -2.25
PITPNM1O00562 SNORA68.3-201ENST00000515906 83 ntBASIC0.97□□□□□ -2.25
PITPNM1O00562 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
PITPNM1O00562 AC090625.1-201ENST00000357130 210 ntBASIC0.95□□□□□ -2.26
PITPNM1O00562 MIR216A-201ENST00000385063 110 ntBASIC0.95□□□□□ -2.26
PITPNM1O00562 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
PITPNM1O00562 AC069113.3-201ENST00000521019 150 ntBASIC0.94□□□□□ -2.26
PITPNM1O00562 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
PITPNM1O00562 RNA5SP62-201ENST00000363457 110 ntBASIC0.93□□□□□ -2.26
PITPNM1O00562 MIRLET7D-201ENST00000362263 87 ntBASIC0.9□□□□□ -2.27
PITPNM1O00562 RNU6-284P-201ENST00000411105 106 ntBASIC0.89□□□□□ -2.27
PITPNM1O00562 RNU7-165P-201ENST00000458864 60 ntBASIC0.89□□□□□ -2.27
PITPNM1O00562 MIR4743-201ENST00000584576 69 ntBASIC0.89□□□□□ -2.27
PITPNM1O00562 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
PITPNM1O00562 AP000533.3-201ENST00000447704 118 ntBASIC0.88□□□□□ -2.27
PITPNM1O00562 RNU6-345P-201ENST00000517001 107 ntBASIC0.88□□□□□ -2.27
PITPNM1O00562 SNORA32.1-201ENST00000364514 115 ntBASIC0.87□□□□□ -2.27
PITPNM1O00562 MIR610-201ENST00000385139 96 ntBASIC0.87□□□□□ -2.27
PITPNM1O00562 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
PITPNM1O00562 MIR593-201ENST00000384856 100 ntBASIC0.86□□□□□ -2.27
PITPNM1O00562 RNU7-159P-201ENST00000459284 62 ntBASIC0.86□□□□□ -2.27
PITPNM1O00562 RNA5SP66-201ENST00000517178 101 ntBASIC0.86□□□□□ -2.27
PITPNM1O00562 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
PITPNM1O00562 RNU6-620P-201ENST00000384017 96 ntBASIC0.85□□□□□ -2.27
PITPNM1O00562 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
PITPNM1O00562 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
PITPNM1O00562 RNA5SP26-201ENST00000362406 119 ntBASIC0.84□□□□□ -2.27
PITPNM1O00562 Y_RNA.189-201ENST00000363959 112 ntBASIC0.84□□□□□ -2.27
PITPNM1O00562 RNU6-1340P-201ENST00000384438 107 ntBASIC0.84□□□□□ -2.27
PITPNM1O00562 AC093726.3-201ENST00000637588 150 ntBASIC0.84□□□□□ -2.27
PITPNM1O00562 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PITPNM1O00562 MIR3179-1-201ENST00000578940 84 ntBASIC0.83□□□□□ -2.28
PITPNM1O00562 MIR3179-2-201ENST00000579107 84 ntBASIC0.83□□□□□ -2.28
PITPNM1O00562 MIR3179-3-201ENST00000579566 84 ntBASIC0.83□□□□□ -2.28
PITPNM1O00562 MIR3179-4-201ENST00000617599 84 ntBASIC0.83□□□□□ -2.28
PITPNM1O00562 MIR193B-201ENST00000384907 83 ntBASIC0.82□□□□□ -2.28
PITPNM1O00562 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms