Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-497P-201ENST00000365316 104 ntBASIC-2.61□□□□□ -2.83
DFFAO00273 SNORD113-2-201ENST00000391082 72 ntBASIC-2.61□□□□□ -2.83
DFFAO00273 RNU6-841P-201ENST00000383872 107 ntBASIC-2.62□□□□□ -2.83
DFFAO00273 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.62□□□□□ -2.83
DFFAO00273 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.62□□□□□ -2.83
DFFAO00273 MIR548BB-201ENST00000626714 66 ntBASIC-2.62□□□□□ -2.83
DFFAO00273 RNU6-247P-201ENST00000362636 107 ntBASIC-2.63□□□□□ -2.83
DFFAO00273 MIR1297-201ENST00000637311 77 ntBASIC-2.63□□□□□ -2.83
DFFAO00273 RNU6-668P-201ENST00000364180 107 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 RNU6-129P-201ENST00000391022 107 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 AC008267.6-201ENST00000441664 139 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 RNU6-589P-201ENST00000516485 107 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 MIR548AM-201ENST00000584298 74 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.64□□□□□ -2.83
DFFAO00273 RNA5SP173-201ENST00000364857 136 ntBASIC-2.65□□□□□ -2.83
DFFAO00273 RNU6-402P-201ENST00000410678 103 ntBASIC-2.65□□□□□ -2.83
DFFAO00273 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.65□□□□□ -2.83
DFFAO00273 MIR8053-201ENST00000613344 75 ntBASIC-2.65□□□□□ -2.83
DFFAO00273 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.66□□□□□ -2.84
DFFAO00273 RNU6-267P-201ENST00000516714 103 ntBASIC-2.66□□□□□ -2.84
DFFAO00273 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.66□□□□□ -2.84
DFFAO00273 MIR4484-201ENST00000582855 83 ntBASIC-2.67□□□□□ -2.84
DFFAO00273 AC099654.10-201ENST00000640395 161 ntBASIC-2.67□□□□□ -2.84
DFFAO00273 RNU6-959P-201ENST00000384671 107 ntBASIC-2.68□□□□□ -2.84
DFFAO00273 MIR664B-201ENST00000626756 61 ntBASIC-2.68□□□□□ -2.84
DFFAO00273 SNORD1B-201ENST00000363091 84 ntBASIC-2.69□□□□□ -2.84
DFFAO00273 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.69□□□□□ -2.84
DFFAO00273 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.69□□□□□ -2.84
DFFAO00273 MIR4719-201ENST00000585233 84 ntBASIC-2.69□□□□□ -2.84
DFFAO00273 MALAT1.1-201ENST00000618249 95 ntBASIC-2.69□□□□□ -2.84
DFFAO00273 SNORD113.1-201ENST00000363280 73 ntBASIC-2.7□□□□□ -2.84
DFFAO00273 RNU6-995P-201ENST00000391244 107 ntBASIC-2.7□□□□□ -2.84
DFFAO00273 RNU6-380P-201ENST00000410207 107 ntBASIC-2.7□□□□□ -2.84
DFFAO00273 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 SNORA41B-201ENST00000384785 128 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 AL031737.1-201ENST00000450125 223 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 AC013734.1-201ENST00000619329 111 ntBASIC-2.71□□□□□ -2.84
DFFAO00273 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.72□□□□□ -2.84
DFFAO00273 MIR496-201ENST00000385226 102 ntBASIC-2.72□□□□□ -2.84
DFFAO00273 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.72□□□□□ -2.84
DFFAO00273 MIR3133-201ENST00000583157 78 ntBASIC-2.72□□□□□ -2.84
DFFAO00273 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.72□□□□□ -2.84
DFFAO00273 RNU6-834P-201ENST00000362367 110 ntBASIC-2.73□□□□□ -2.85
DFFAO00273 RNU6-980P-201ENST00000516925 103 ntBASIC-2.73□□□□□ -2.85
DFFAO00273 AC005520.4-201ENST00000604337 90 ntBASIC-2.73□□□□□ -2.85
DFFAO00273 RNY4P18-201ENST00000391107 89 ntBASIC-2.74□□□□□ -2.85
DFFAO00273 RNU4-88P-201ENST00000411220 86 ntBASIC-2.74□□□□□ -2.85
DFFAO00273 SNORA40.13-201ENST00000516379 120 ntBASIC-2.74□□□□□ -2.85
DFFAO00273 AL365222.1-201ENST00000614661 98 ntBASIC-2.75□□□□□ -2.85
DFFAO00273 MIR450A1-201ENST00000362262 91 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 SNORA63.4-201ENST00000362763 126 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 SNORA27.2-201ENST00000363365 126 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 SNORD45A-201ENST00000384512 84 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.76□□□□□ -2.85
DFFAO00273 AC090425.1-201ENST00000610007 140 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 AP001318.4-201ENST00000616637 121 ntBASIC-2.76□□□□□ -2.85
DFFAO00273 RNU6-755P-201ENST00000364400 103 ntBASIC-2.77□□□□□ -2.85
DFFAO00273 RNU6-118P-201ENST00000516552 102 ntBASIC-2.77□□□□□ -2.85
DFFAO00273 RNU7-151P-201ENST00000516930 53 ntBASIC-2.77□□□□□ -2.85
DFFAO00273 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.77□□□□□ -2.85
DFFAO00273 AC006160.2-201ENST00000637708 154 ntBASIC-2.77□□□□□ -2.85
DFFAO00273 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.79□□□□□ -2.86
DFFAO00273 SNORD63.2-201ENST00000516303 64 ntBASIC-2.79□□□□□ -2.86
DFFAO00273 U6.97-201ENST00000636904 101 ntBASIC-2.79□□□□□ -2.86
DFFAO00273 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.79□□□□□ -2.86
DFFAO00273 SNORD115-31-201ENST00000365318 82 ntBASIC-2.81□□□□□ -2.86
DFFAO00273 RNU6-669P-201ENST00000365575 107 ntBASIC-2.81□□□□□ -2.86
DFFAO00273 RNU6-675P-201ENST00000384236 104 ntBASIC-2.81□□□□□ -2.86
DFFAO00273 MIR579-201ENST00000385221 98 ntBASIC-2.81□□□□□ -2.86
DFFAO00273 RNU6-794P-201ENST00000517261 64 ntBASIC-2.81□□□□□ -2.86
DFFAO00273 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.81□□□□□ -2.86
DFFAO00273 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.82□□□□□ -2.86
DFFAO00273 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.83□□□□□ -2.86
DFFAO00273 RNU6-172P-201ENST00000411000 93 ntBASIC-2.83□□□□□ -2.86
DFFAO00273 RNY3P8-201ENST00000411366 126 ntBASIC-2.84□□□□□ -2.86
DFFAO00273 MIR548W-201ENST00000581970 74 ntBASIC-2.84□□□□□ -2.86
DFFAO00273 MIR664A-201ENST00000626086 82 ntBASIC-2.84□□□□□ -2.86
DFFAO00273 MIR7978-201ENST00000636158 59 ntBASIC-2.84□□□□□ -2.86
DFFAO00273 RNU6-315P-201ENST00000362666 107 ntBASIC-2.85□□□□□ -2.87
DFFAO00273 RNU6-81P-201ENST00000365608 104 ntBASIC-2.85□□□□□ -2.87
DFFAO00273 snoU13.10-201ENST00000459301 103 ntBASIC-2.85□□□□□ -2.87
DFFAO00273 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.86□□□□□ -2.87
DFFAO00273 MIR125B1-201ENST00000385236 88 ntBASIC-2.87□□□□□ -2.87
DFFAO00273 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.87□□□□□ -2.87
DFFAO00273 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.88□□□□□ -2.87
DFFAO00273 RNU6-974P-201ENST00000384099 108 ntBASIC-2.88□□□□□ -2.87
DFFAO00273 RNU6-209P-201ENST00000384118 107 ntBASIC-2.88□□□□□ -2.87
DFFAO00273 RNU6-523P-201ENST00000516304 54 ntBASIC-2.88□□□□□ -2.87
DFFAO00273 RNU6-844P-201ENST00000517175 102 ntBASIC-2.88□□□□□ -2.87
DFFAO00273 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.89□□□□□ -2.87
DFFAO00273 MIR488-201ENST00000365739 83 ntBASIC-2.89□□□□□ -2.87
DFFAO00273 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.89□□□□□ -2.87
DFFAO00273 SNORD54-201ENST00000459159 67 ntBASIC-2.89□□□□□ -2.87
DFFAO00273 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.89□□□□□ -2.87
DFFAO00273 RNA5SP405-201ENST00000363059 114 ntBASIC-2.9□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms