Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 MIR487B-201ENST00000385021 84 ntBASIC-2.77□□□□□ -2.85
SMCO3A2RU48 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.77□□□□□ -2.85
SMCO3A2RU48 MIR450A1-201ENST00000362262 91 ntBASIC-2.78□□□□□ -2.85
SMCO3A2RU48 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.78□□□□□ -2.85
SMCO3A2RU48 RNU6-563P-201ENST00000364872 108 ntBASIC-2.78□□□□□ -2.85
SMCO3A2RU48 AL031737.1-201ENST00000450125 223 ntBASIC-2.78□□□□□ -2.85
SMCO3A2RU48 AL627230.5-201ENST00000619807 58 ntBASIC-2.78□□□□□ -2.85
SMCO3A2RU48 MIR1297-201ENST00000637311 77 ntBASIC-2.78□□□□□ -2.85
SMCO3A2RU48 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.79□□□□□ -2.86
SMCO3A2RU48 RNU6-794P-201ENST00000517261 64 ntBASIC-2.79□□□□□ -2.86
SMCO3A2RU48 SNORD113.1-201ENST00000363280 73 ntBASIC-2.8□□□□□ -2.86
SMCO3A2RU48 AP001318.4-201ENST00000616637 121 ntBASIC-2.8□□□□□ -2.86
SMCO3A2RU48 SNORA41B-201ENST00000384785 128 ntBASIC-2.81□□□□□ -2.86
SMCO3A2RU48 RNU6-258P-201ENST00000390884 101 ntBASIC-2.81□□□□□ -2.86
SMCO3A2RU48 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.81□□□□□ -2.86
SMCO3A2RU48 MIR8053-201ENST00000613344 75 ntBASIC-2.81□□□□□ -2.86
SMCO3A2RU48 RNU6-834P-201ENST00000362367 110 ntBASIC-2.82□□□□□ -2.86
SMCO3A2RU48 RNU6-247P-201ENST00000362636 107 ntBASIC-2.82□□□□□ -2.86
SMCO3A2RU48 SNORA40.13-201ENST00000516379 120 ntBASIC-2.82□□□□□ -2.86
SMCO3A2RU48 U4.2-201ENST00000618561 85 ntBASIC-2.82□□□□□ -2.86
SMCO3A2RU48 SNORD1B-201ENST00000363091 84 ntBASIC-2.83□□□□□ -2.86
SMCO3A2RU48 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.84□□□□□ -2.86
SMCO3A2RU48 SNORD45A-201ENST00000384512 84 ntBASIC-2.85□□□□□ -2.87
SMCO3A2RU48 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.85□□□□□ -2.87
SMCO3A2RU48 RNU6-228P-201ENST00000362700 106 ntBASIC-2.86□□□□□ -2.87
SMCO3A2RU48 RNA5SP173-201ENST00000364857 136 ntBASIC-2.86□□□□□ -2.87
SMCO3A2RU48 SNORD114-3-201ENST00000364969 75 ntBASIC-2.86□□□□□ -2.87
SMCO3A2RU48 RNU6-81P-201ENST00000365608 104 ntBASIC-2.86□□□□□ -2.87
SMCO3A2RU48 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.86□□□□□ -2.87
SMCO3A2RU48 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.87□□□□□ -2.87
SMCO3A2RU48 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.87□□□□□ -2.87
SMCO3A2RU48 MIR3123-201ENST00000583417 75 ntBASIC-2.87□□□□□ -2.87
SMCO3A2RU48 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.87□□□□□ -2.87
SMCO3A2RU48 AC006160.2-201ENST00000637708 154 ntBASIC-2.87□□□□□ -2.87
SMCO3A2RU48 RNU6-209P-201ENST00000384118 107 ntBASIC-2.88□□□□□ -2.87
SMCO3A2RU48 RNY4P18-201ENST00000391107 89 ntBASIC-2.88□□□□□ -2.87
SMCO3A2RU48 RNU6-380P-201ENST00000410207 107 ntBASIC-2.88□□□□□ -2.87
SMCO3A2RU48 RNU6-675P-201ENST00000384236 104 ntBASIC-2.89□□□□□ -2.87
SMCO3A2RU48 AC108019.1-201ENST00000512540 175 ntBASIC-2.89□□□□□ -2.87
SMCO3A2RU48 MIR664A-201ENST00000626086 82 ntBASIC-2.89□□□□□ -2.87
SMCO3A2RU48 SNORA63.4-201ENST00000362763 126 ntBASIC-2.9□□□□□ -2.87
SMCO3A2RU48 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.9□□□□□ -2.87
SMCO3A2RU48 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.9□□□□□ -2.87
SMCO3A2RU48 RNU6-995P-201ENST00000391244 107 ntBASIC-2.9□□□□□ -2.87
SMCO3A2RU48 RNU6-841P-201ENST00000383872 107 ntBASIC-2.91□□□□□ -2.88
SMCO3A2RU48 RNU7-151P-201ENST00000516930 53 ntBASIC-2.91□□□□□ -2.88
SMCO3A2RU48 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.92□□□□□ -2.88
SMCO3A2RU48 MIR488-201ENST00000365739 83 ntBASIC-2.92□□□□□ -2.88
SMCO3A2RU48 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.92□□□□□ -2.88
SMCO3A2RU48 RNU6-755P-201ENST00000364400 103 ntBASIC-2.93□□□□□ -2.88
SMCO3A2RU48 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.95□□□□□ -2.88
SMCO3A2RU48 MIR664B-201ENST00000626756 61 ntBASIC-2.95□□□□□ -2.88
SMCO3A2RU48 SNORA27.2-201ENST00000363365 126 ntBASIC-2.96□□□□□ -2.88
SMCO3A2RU48 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.96□□□□□ -2.88
SMCO3A2RU48 MIR579-201ENST00000385221 98 ntBASIC-2.96□□□□□ -2.88
SMCO3A2RU48 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.96□□□□□ -2.88
SMCO3A2RU48 SNORD63.2-201ENST00000516303 64 ntBASIC-2.96□□□□□ -2.88
SMCO3A2RU48 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 RNU6-669P-201ENST00000365575 107 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 RNU6-22P-201ENST00000384355 107 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 RNU6-844P-201ENST00000517175 102 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 MIR548AM-201ENST00000584298 74 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 AC013734.1-201ENST00000619329 111 ntBASIC-2.97□□□□□ -2.88
SMCO3A2RU48 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.98□□□□□ -2.89
SMCO3A2RU48 MIR7978-201ENST00000636158 59 ntBASIC-2.98□□□□□ -2.89
SMCO3A2RU48 RNU6-315P-201ENST00000362666 107 ntBASIC-2.99□□□□□ -2.89
SMCO3A2RU48 RNY4P27-201ENST00000363341 96 ntBASIC-2.99□□□□□ -2.89
SMCO3A2RU48 RNU6-172P-201ENST00000411000 93 ntBASIC-2.99□□□□□ -2.89
SMCO3A2RU48 MIR4756-201ENST00000577874 78 ntBASIC-2.99□□□□□ -2.89
SMCO3A2RU48 AC005520.4-201ENST00000604337 90 ntBASIC-2.99□□□□□ -2.89
SMCO3A2RU48 RNU6-640P-201ENST00000363693 105 ntBASIC-3.01□□□□□ -2.89
SMCO3A2RU48 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.03□□□□□ -2.89
SMCO3A2RU48 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.03□□□□□ -2.89
SMCO3A2RU48 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.04□□□□□ -2.9
SMCO3A2RU48 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.04□□□□□ -2.9
SMCO3A2RU48 MIR125B1-201ENST00000385236 88 ntBASIC-3.04□□□□□ -2.9
SMCO3A2RU48 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.04□□□□□ -2.9
SMCO3A2RU48 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.04□□□□□ -2.9
SMCO3A2RU48 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.05□□□□□ -2.9
SMCO3A2RU48 SNORD116-24-201ENST00000384549 92 ntBASIC-3.05□□□□□ -2.9
SMCO3A2RU48 RNU6-523P-201ENST00000516304 54 ntBASIC-3.05□□□□□ -2.9
SMCO3A2RU48 U6.97-201ENST00000636904 101 ntBASIC-3.05□□□□□ -2.9
SMCO3A2RU48 snosnR66.1-201ENST00000391095 99 ntBASIC-3.07□□□□□ -2.9
SMCO3A2RU48 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.07□□□□□ -2.9
SMCO3A2RU48 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.07□□□□□ -2.9
SMCO3A2RU48 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.08□□□□□ -2.9
SMCO3A2RU48 RNY3P8-201ENST00000411366 126 ntBASIC-3.08□□□□□ -2.9
SMCO3A2RU48 RNU6-313P-201ENST00000516317 112 ntBASIC-3.08□□□□□ -2.9
SMCO3A2RU48 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.09□□□□□ -2.9
SMCO3A2RU48 Y_RNA.284-201ENST00000364806 102 ntBASIC-3.09□□□□□ -2.9
SMCO3A2RU48 RNU6-32P-201ENST00000383948 107 ntBASIC-3.09□□□□□ -2.9
SMCO3A2RU48 RNU6-13P-201ENST00000384248 107 ntBASIC-3.09□□□□□ -2.9
SMCO3A2RU48 RNU6-12P-201ENST00000384604 107 ntBASIC-3.09□□□□□ -2.9
SMCO3A2RU48 RNU6-41P-201ENST00000384741 107 ntBASIC-3.09□□□□□ -2.9
SMCO3A2RU48 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.09□□□□□ -2.9
SMCO3A2RU48 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.1□□□□□ -2.91
SMCO3A2RU48 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.1□□□□□ -2.91
SMCO3A2RU48 RNU6-974P-201ENST00000384099 108 ntBASIC-3.1□□□□□ -2.91
SMCO3A2RU48 MIR154-201ENST00000385243 84 ntBASIC-3.1□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 260 ms