Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU7-200P-201ENST00000516105 62 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 U4.2-201ENST00000618561 85 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.95□□□□□ -2.72
HHLA3Q9XRX5 RNU6-886P-201ENST00000384319 105 ntBASIC-1.95□□□□□ -2.72
HHLA3Q9XRX5 RNU6-463P-201ENST00000384340 107 ntBASIC-1.95□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.95□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.96□□□□□ -2.72
HHLA3Q9XRX5 SNORD116-21-201ENST00000384507 92 ntBASIC-1.96□□□□□ -2.72
HHLA3Q9XRX5 RNU6-587P-201ENST00000391282 106 ntBASIC-1.96□□□□□ -2.72
HHLA3Q9XRX5 RNU6-598P-201ENST00000364017 105 ntBASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 RNU6-182P-201ENST00000516970 105 ntBASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 MIR664B-201ENST00000626756 61 ntBASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.97□□□□□ -2.72
HHLA3Q9XRX5 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.98□□□□□ -2.73
HHLA3Q9XRX5 RNU6-109P-201ENST00000516364 107 ntBASIC-1.98□□□□□ -2.73
HHLA3Q9XRX5 RNU6-184P-201ENST00000516514 107 ntBASIC-1.98□□□□□ -2.73
HHLA3Q9XRX5 MIR3123-201ENST00000583417 75 ntBASIC-1.98□□□□□ -2.73
HHLA3Q9XRX5 MIR429-201ENST00000362106 83 ntBASIC-1.99□□□□□ -2.73
HHLA3Q9XRX5 RNU6-330P-201ENST00000363015 107 ntBASIC-1.99□□□□□ -2.73
HHLA3Q9XRX5 RNU6-841P-201ENST00000383872 107 ntBASIC-1.99□□□□□ -2.73
HHLA3Q9XRX5 MIR23C-201ENST00000579846 100 ntBASIC-1.99□□□□□ -2.73
HHLA3Q9XRX5 MIR548AM-201ENST00000584298 74 ntBASIC-1.99□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.93-201ENST00000363066 109 ntBASIC-2□□□□□ -2.73
HHLA3Q9XRX5 MIR1302-5-201ENST00000408164 150 ntBASIC-2□□□□□ -2.73
HHLA3Q9XRX5 RNU6-346P-201ENST00000516288 111 ntBASIC-2□□□□□ -2.73
HHLA3Q9XRX5 AC120024.2-201ENST00000576526 175 ntBASIC-2□□□□□ -2.73
HHLA3Q9XRX5 MIR3675-201ENST00000583661 73 ntBASIC-2□□□□□ -2.73
HHLA3Q9XRX5 RNU6-624P-201ENST00000363411 107 ntBASIC-2.01□□□□□ -2.73
HHLA3Q9XRX5 RNU6-563P-201ENST00000364872 108 ntBASIC-2.01□□□□□ -2.73
HHLA3Q9XRX5 RNU6-982P-201ENST00000516216 102 ntBASIC-2.01□□□□□ -2.73
HHLA3Q9XRX5 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.01□□□□□ -2.73
HHLA3Q9XRX5 U4.4-201ENST00000620626 117 ntBASIC-2.01□□□□□ -2.73
HHLA3Q9XRX5 U2.18-201ENST00000622185 84 ntBASIC-2.01□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 RNU6-698P-201ENST00000363523 107 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 RNU6-34P-201ENST00000364874 107 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 MT-TG-201ENST00000387429 68 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 MTATP8P2-201ENST00000435212 202 ntBASIC-2.02□□□□□ -2.73
HHLA3Q9XRX5 SNORD115-37-201ENST00000363768 82 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 SNORD114-3-201ENST00000364969 75 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 RNU6-604P-201ENST00000390917 100 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 RNU6-980P-201ENST00000516925 103 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.03□□□□□ -2.73
HHLA3Q9XRX5 RNU6-633P-201ENST00000362612 103 ntBASIC-2.04□□□□□ -2.74
HHLA3Q9XRX5 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.04□□□□□ -2.74
HHLA3Q9XRX5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.04□□□□□ -2.74
HHLA3Q9XRX5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.04□□□□□ -2.74
HHLA3Q9XRX5 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.05□□□□□ -2.74
HHLA3Q9XRX5 SNORA8.1-201ENST00000384250 140 ntBASIC-2.05□□□□□ -2.74
HHLA3Q9XRX5 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.05□□□□□ -2.74
HHLA3Q9XRX5 RNU6-554P-201ENST00000410466 106 ntBASIC-2.06□□□□□ -2.74
HHLA3Q9XRX5 RNU4-88P-201ENST00000411220 86 ntBASIC-2.06□□□□□ -2.74
HHLA3Q9XRX5 RNU6-303P-201ENST00000517091 106 ntBASIC-2.06□□□□□ -2.74
HHLA3Q9XRX5 MIR3170-201ENST00000582699 77 ntBASIC-2.06□□□□□ -2.74
HHLA3Q9XRX5 MIR548V-201ENST00000584165 80 ntBASIC-2.06□□□□□ -2.74
HHLA3Q9XRX5 MIR4723-201ENST00000585070 81 ntBASIC-2.06□□□□□ -2.74
HHLA3Q9XRX5 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.07□□□□□ -2.74
HHLA3Q9XRX5 RNU6-106P-201ENST00000384405 107 ntBASIC-2.07□□□□□ -2.74
HHLA3Q9XRX5 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 SNORD45.1-201ENST00000363181 77 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 RNY1P5-201ENST00000383890 115 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 RNU6-258P-201ENST00000390884 101 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 AC093729.1-201ENST00000513074 128 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 MIR4668-201ENST00000582284 70 ntBASIC-2.08□□□□□ -2.74
HHLA3Q9XRX5 SNORD116-14-201ENST00000383894 92 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 SNORD116-17-201ENST00000383929 92 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 SNORD116-15-201ENST00000384445 92 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 SNORD116-19-201ENST00000384729 92 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 SNORA19-201ENST00000384737 128 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 AC074348.1-201ENST00000426503 132 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.09□□□□□ -2.74
HHLA3Q9XRX5 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.1□□□□□ -2.75
HHLA3Q9XRX5 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.1□□□□□ -2.75
HHLA3Q9XRX5 RNU6-557P-201ENST00000516842 110 ntBASIC-2.1□□□□□ -2.75
HHLA3Q9XRX5 RNU6-255P-201ENST00000516957 105 ntBASIC-2.1□□□□□ -2.75
HHLA3Q9XRX5 RNU6-694P-201ENST00000364071 147 ntBASIC-2.11□□□□□ -2.75
HHLA3Q9XRX5 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.11□□□□□ -2.75
HHLA3Q9XRX5 MIR630-201ENST00000384957 97 ntBASIC-2.11□□□□□ -2.75
HHLA3Q9XRX5 MIR548AA1-201ENST00000384971 97 ntBASIC-2.11□□□□□ -2.75
HHLA3Q9XRX5 RNU6-907P-201ENST00000390924 102 ntBASIC-2.12□□□□□ -2.75
HHLA3Q9XRX5 SNORD113-2-201ENST00000391082 72 ntBASIC-2.12□□□□□ -2.75
HHLA3Q9XRX5 MIR1207-201ENST00000408249 87 ntBASIC-2.12□□□□□ -2.75
HHLA3Q9XRX5 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.12□□□□□ -2.75
HHLA3Q9XRX5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.12□□□□□ -2.75
HHLA3Q9XRX5 RNA5SP405-201ENST00000363059 114 ntBASIC-2.13□□□□□ -2.75
HHLA3Q9XRX5 SNORD116-16-201ENST00000384533 92 ntBASIC-2.13□□□□□ -2.75
HHLA3Q9XRX5 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.13□□□□□ -2.75
HHLA3Q9XRX5 RNU6-686P-201ENST00000364839 107 ntBASIC-2.14□□□□□ -2.75
HHLA3Q9XRX5 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms