Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
LMCD1Q9NZU5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
LMCD1Q9NZU5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 RNU6-995P-201ENST00000391244 107 ntBASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 RNA5SP330-201ENST00000517096 96 ntBASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 MIR4432-201ENST00000581823 84 ntBASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 MIR4677-201ENST00000584153 80 ntBASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 AC108676.2-201ENST00000605225 163 ntBASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 RN7SL660P-201ENST00000614852 299 ntBASIC0.88□□□□□ -2.27
LMCD1Q9NZU5 RNU4-54P-201ENST00000516428 129 ntBASIC0.87□□□□□ -2.27
LMCD1Q9NZU5 RNA5SP121-201ENST00000516537 101 ntBASIC0.87□□□□□ -2.27
LMCD1Q9NZU5 RNU6-229P-201ENST00000516614 102 ntBASIC0.87□□□□□ -2.27
LMCD1Q9NZU5 MIR4464-201ENST00000580818 92 ntBASIC0.87□□□□□ -2.27
LMCD1Q9NZU5 U7.5-201ENST00000517224 61 ntBASIC0.86□□□□□ -2.27
LMCD1Q9NZU5 AC138207.3-201ENST00000585289 166 ntBASIC0.86□□□□□ -2.27
LMCD1Q9NZU5 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
LMCD1Q9NZU5 SNORD118-201ENST00000363593 134 ntBASIC0.85□□□□□ -2.27
LMCD1Q9NZU5 SNORA2A-201ENST00000383885 135 ntBASIC0.85□□□□□ -2.27
LMCD1Q9NZU5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
LMCD1Q9NZU5 SNORA40.8-201ENST00000411034 126 ntBASIC0.85□□□□□ -2.27
LMCD1Q9NZU5 MIR6755-201ENST00000619993 66 ntBASIC0.85□□□□□ -2.27
LMCD1Q9NZU5 RNU7-88P-201ENST00000458752 63 ntBASIC0.84□□□□□ -2.27
LMCD1Q9NZU5 RNU6-1174P-201ENST00000517278 101 ntBASIC0.84□□□□□ -2.27
LMCD1Q9NZU5 U7.6-201ENST00000610841 64 ntBASIC0.84□□□□□ -2.27
LMCD1Q9NZU5 MIR330-201ENST00000362196 94 ntBASIC0.83□□□□□ -2.28
LMCD1Q9NZU5 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
LMCD1Q9NZU5 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
LMCD1Q9NZU5 MIR8087-201ENST00000612745 78 ntBASIC0.83□□□□□ -2.28
LMCD1Q9NZU5 MIR6888-201ENST00000621977 67 ntBASIC0.83□□□□□ -2.28
LMCD1Q9NZU5 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
LMCD1Q9NZU5 RNA5SP257-201ENST00000363023 116 ntBASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 MIR876-201ENST00000401147 81 ntBASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 RNA5SP193-201ENST00000410353 107 ntBASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 SNORD71-201ENST00000411292 86 ntBASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LMCD1Q9NZU5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LMCD1Q9NZU5 MIR3925-201ENST00000584674 77 ntBASIC0.81□□□□□ -2.28
LMCD1Q9NZU5 AL445584.3-201ENST00000617173 78 ntBASIC0.81□□□□□ -2.28
LMCD1Q9NZU5 RNA5SP347-201ENST00000362445 119 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 SNORD63.1-201ENST00000516178 80 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 SNORD63.2-201ENST00000516303 64 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 MIR3170-201ENST00000582699 77 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 AC084368.1-201ENST00000620935 65 ntBASIC0.8□□□□□ -2.28
LMCD1Q9NZU5 SNORD45.2-201ENST00000363552 72 ntBASIC0.79□□□□□ -2.28
LMCD1Q9NZU5 MIR106A-201ENST00000384870 81 ntBASIC0.79□□□□□ -2.28
LMCD1Q9NZU5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.79□□□□□ -2.28
LMCD1Q9NZU5 RNU6-530P-201ENST00000391180 107 ntBASIC0.78□□□□□ -2.28
LMCD1Q9NZU5 RNU6-894P-201ENST00000517094 105 ntBASIC0.78□□□□□ -2.28
LMCD1Q9NZU5 AP000676.1-201ENST00000533307 52 ntBASIC0.78□□□□□ -2.28
LMCD1Q9NZU5 MIR760-201ENST00000390220 80 ntBASIC0.77□□□□□ -2.29
LMCD1Q9NZU5 RNU6-258P-201ENST00000390884 101 ntBASIC0.77□□□□□ -2.29
LMCD1Q9NZU5 RNU6-1326P-201ENST00000391262 107 ntBASIC0.76□□□□□ -2.29
LMCD1Q9NZU5 RNU6-848P-201ENST00000515948 107 ntBASIC0.76□□□□□ -2.29
LMCD1Q9NZU5 RNU6-617P-201ENST00000516147 107 ntBASIC0.76□□□□□ -2.29
LMCD1Q9NZU5 RNU6-473P-201ENST00000516164 107 ntBASIC0.76□□□□□ -2.29
LMCD1Q9NZU5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.76□□□□□ -2.29
LMCD1Q9NZU5 Y_RNA.206-201ENST00000364136 102 ntBASIC0.75□□□□□ -2.29
LMCD1Q9NZU5 MIR499B-201ENST00000636498 73 ntBASIC0.75□□□□□ -2.29
LMCD1Q9NZU5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
LMCD1Q9NZU5 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
LMCD1Q9NZU5 Y_RNA.345-201ENST00000365384 92 ntBASIC0.74□□□□□ -2.29
LMCD1Q9NZU5 RNU7-129P-201ENST00000516128 62 ntBASIC0.74□□□□□ -2.29
LMCD1Q9NZU5 AC104408.1-201ENST00000605241 170 ntBASIC0.74□□□□□ -2.29
LMCD1Q9NZU5 snoR1.1-201ENST00000628177 80 ntBASIC0.74□□□□□ -2.29
LMCD1Q9NZU5 Y_RNA.321-201ENST00000365149 102 ntBASIC0.73□□□□□ -2.29
LMCD1Q9NZU5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
LMCD1Q9NZU5 RNU7-55P-201ENST00000459426 62 ntBASIC0.73□□□□□ -2.29
LMCD1Q9NZU5 MIR6507-201ENST00000613630 70 ntBASIC0.73□□□□□ -2.29
LMCD1Q9NZU5 MIR520D-201ENST00000385002 87 ntBASIC0.72□□□□□ -2.29
LMCD1Q9NZU5 AL391099.1-201ENST00000624635 187 ntBASIC0.72□□□□□ -2.29
LMCD1Q9NZU5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
LMCD1Q9NZU5 SNORA62.4-201ENST00000365504 151 ntBASIC0.71□□□□□ -2.3
LMCD1Q9NZU5 Y_RNA.613-201ENST00000410726 97 ntBASIC0.71□□□□□ -2.3
LMCD1Q9NZU5 RNU6-732P-201ENST00000516033 103 ntBASIC0.71□□□□□ -2.3
LMCD1Q9NZU5 RNU6-1238P-201ENST00000517215 102 ntBASIC0.71□□□□□ -2.3
LMCD1Q9NZU5 RNA5SP98-201ENST00000363158 137 ntBASIC0.7□□□□□ -2.3
LMCD1Q9NZU5 RNU6-973P-201ENST00000364690 107 ntBASIC0.7□□□□□ -2.3
LMCD1Q9NZU5 RNU6-1111P-201ENST00000391118 107 ntBASIC0.7□□□□□ -2.3
LMCD1Q9NZU5 MIR1197-201ENST00000408818 88 ntBASIC0.7□□□□□ -2.3
LMCD1Q9NZU5 SCARNA11.2-201ENST00000517183 154 ntBASIC0.7□□□□□ -2.3
LMCD1Q9NZU5 uc_338.36-201ENST00000622331 158 ntBASIC0.7□□□□□ -2.3
LMCD1Q9NZU5 RNU6-1047P-201ENST00000364418 107 ntBASIC0.69□□□□□ -2.3
LMCD1Q9NZU5 MIR1468-201ENST00000410600 86 ntBASIC0.69□□□□□ -2.3
LMCD1Q9NZU5 AC096531.1-201ENST00000419107 107 ntBASIC0.69□□□□□ -2.3
LMCD1Q9NZU5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.68□□□□□ -2.3
LMCD1Q9NZU5 SNORD44.1-201ENST00000363202 61 ntBASIC0.67□□□□□ -2.3
LMCD1Q9NZU5 SNORD19-201ENST00000391191 68 ntBASIC0.67□□□□□ -2.3
LMCD1Q9NZU5 MIR8068-201ENST00000618032 68 ntBASIC0.67□□□□□ -2.3
LMCD1Q9NZU5 MIR4426-201ENST00000640330 63 ntBASIC0.67□□□□□ -2.3
LMCD1Q9NZU5 SNORD111B-201ENST00000408587 80 ntBASIC0.66□□□□□ -2.3
LMCD1Q9NZU5 MIR5704-201ENST00000584029 77 ntBASIC0.66□□□□□ -2.3
LMCD1Q9NZU5 MIR5087-201ENST00000635826 76 ntBASIC0.66□□□□□ -2.3
LMCD1Q9NZU5 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
LMCD1Q9NZU5 SNORA42.1-201ENST00000363515 137 ntBASIC0.65□□□□□ -2.31
LMCD1Q9NZU5 RNU6-1133P-201ENST00000410963 100 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms