Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 U7.5-201ENST00000517224 61 ntBASIC0.85□□□□□ -2.27
PRDM9Q9NQV7 MIR6888-201ENST00000621977 67 ntBASIC0.85□□□□□ -2.27
PRDM9Q9NQV7 RNU6-1133P-201ENST00000410963 100 ntBASIC0.84□□□□□ -2.27
PRDM9Q9NQV7 Y_RNA.139-201ENST00000363464 102 ntBASIC0.83□□□□□ -2.28
PRDM9Q9NQV7 RNU6-1174P-201ENST00000517278 101 ntBASIC0.83□□□□□ -2.28
PRDM9Q9NQV7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 SNORD114-26-201ENST00000363543 72 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 MIR598-201ENST00000384868 97 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 AC104408.1-201ENST00000605241 170 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.82□□□□□ -2.28
PRDM9Q9NQV7 RNU6-900P-201ENST00000384498 102 ntBASIC0.81□□□□□ -2.28
PRDM9Q9NQV7 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
PRDM9Q9NQV7 AC096531.1-201ENST00000419107 107 ntBASIC0.81□□□□□ -2.28
PRDM9Q9NQV7 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
PRDM9Q9NQV7 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
PRDM9Q9NQV7 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
PRDM9Q9NQV7 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
PRDM9Q9NQV7 RNU6-1250P-201ENST00000391218 107 ntBASIC0.8□□□□□ -2.28
PRDM9Q9NQV7 Y_RNA.613-201ENST00000410726 97 ntBASIC0.8□□□□□ -2.28
PRDM9Q9NQV7 RNU6-1204P-201ENST00000363948 107 ntBASIC0.79□□□□□ -2.28
PRDM9Q9NQV7 RNU6-127P-201ENST00000390897 107 ntBASIC0.79□□□□□ -2.28
PRDM9Q9NQV7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
PRDM9Q9NQV7 RNU7-88P-201ENST00000458752 63 ntBASIC0.79□□□□□ -2.28
PRDM9Q9NQV7 MTRNR2L9-201ENST00000622562 75 ntBASIC0.79□□□□□ -2.28
PRDM9Q9NQV7 Y_RNA.321-201ENST00000365149 102 ntBASIC0.78□□□□□ -2.28
PRDM9Q9NQV7 MIR148A-201ENST00000362215 68 ntBASIC0.77□□□□□ -2.29
PRDM9Q9NQV7 CR383656.4-201ENST00000546909 122 ntBASIC0.77□□□□□ -2.29
PRDM9Q9NQV7 MIR5000-201ENST00000577717 103 ntBASIC0.77□□□□□ -2.29
PRDM9Q9NQV7 CYP3A137P-201ENST00000562436 69 ntBASIC0.76□□□□□ -2.29
PRDM9Q9NQV7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.75□□□□□ -2.29
PRDM9Q9NQV7 SNORA68.3-201ENST00000515906 83 ntBASIC0.75□□□□□ -2.29
PRDM9Q9NQV7 MIR6514-201ENST00000622549 70 ntBASIC0.75□□□□□ -2.29
PRDM9Q9NQV7 RNU6-986P-201ENST00000363133 102 ntBASIC0.74□□□□□ -2.29
PRDM9Q9NQV7 MIR6779-201ENST00000617283 64 ntBASIC0.74□□□□□ -2.29
PRDM9Q9NQV7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
PRDM9Q9NQV7 MIR3170-201ENST00000582699 77 ntBASIC0.73□□□□□ -2.29
PRDM9Q9NQV7 uc_338.36-201ENST00000622331 158 ntBASIC0.73□□□□□ -2.29
PRDM9Q9NQV7 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
PRDM9Q9NQV7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
PRDM9Q9NQV7 MIR103A1-201ENST00000362165 78 ntBASIC0.72□□□□□ -2.29
PRDM9Q9NQV7 MIRLET7D-201ENST00000362263 87 ntBASIC0.72□□□□□ -2.29
PRDM9Q9NQV7 MIR29B1-201ENST00000385015 81 ntBASIC0.72□□□□□ -2.29
PRDM9Q9NQV7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
PRDM9Q9NQV7 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
PRDM9Q9NQV7 RNU6-1111P-201ENST00000391118 107 ntBASIC0.71□□□□□ -2.3
PRDM9Q9NQV7 SNORD63.2-201ENST00000516303 64 ntBASIC0.71□□□□□ -2.3
PRDM9Q9NQV7 RNU6-455P-201ENST00000384681 107 ntBASIC0.7□□□□□ -2.3
PRDM9Q9NQV7 MIR892B-201ENST00000401279 77 ntBASIC0.7□□□□□ -2.3
PRDM9Q9NQV7 RNU6-732P-201ENST00000516033 103 ntBASIC0.7□□□□□ -2.3
PRDM9Q9NQV7 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
PRDM9Q9NQV7 RNA5SP436-201ENST00000516020 115 ntBASIC0.68□□□□□ -2.3
PRDM9Q9NQV7 RNU6-180P-201ENST00000516697 61 ntBASIC0.68□□□□□ -2.3
PRDM9Q9NQV7 RNU6-1238P-201ENST00000517215 102 ntBASIC0.68□□□□□ -2.3
PRDM9Q9NQV7 RNU6-742P-201ENST00000365289 107 ntBASIC0.67□□□□□ -2.3
PRDM9Q9NQV7 RNU6-815P-201ENST00000384080 113 ntBASIC0.67□□□□□ -2.3
PRDM9Q9NQV7 MIR216A-201ENST00000385063 110 ntBASIC0.67□□□□□ -2.3
PRDM9Q9NQV7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
PRDM9Q9NQV7 AC069113.3-201ENST00000521019 150 ntBASIC0.67□□□□□ -2.3
PRDM9Q9NQV7 RN7SL793P-201ENST00000583259 296 ntBASIC0.67□□□□□ -2.3
PRDM9Q9NQV7 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
PRDM9Q9NQV7 RNU6-974P-201ENST00000384099 108 ntBASIC0.65□□□□□ -2.31
PRDM9Q9NQV7 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
PRDM9Q9NQV7 MIR6507-201ENST00000613630 70 ntBASIC0.65□□□□□ -2.31
PRDM9Q9NQV7 MIR6854-201ENST00000614935 69 ntBASIC0.65□□□□□ -2.31
PRDM9Q9NQV7 RNU6-822P-201ENST00000362707 106 ntBASIC0.64□□□□□ -2.31
PRDM9Q9NQV7 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
PRDM9Q9NQV7 MIR643-201ENST00000385267 97 ntBASIC0.64□□□□□ -2.31
PRDM9Q9NQV7 RNA5SP163-201ENST00000410304 99 ntBASIC0.64□□□□□ -2.31
PRDM9Q9NQV7 MIR4743-201ENST00000584576 69 ntBASIC0.64□□□□□ -2.31
PRDM9Q9NQV7 MIR548H2-201ENST00000408874 88 ntBASIC0.63□□□□□ -2.31
PRDM9Q9NQV7 RNU6-721P-201ENST00000410155 105 ntBASIC0.63□□□□□ -2.31
PRDM9Q9NQV7 AC090625.1-201ENST00000357130 210 ntBASIC0.62□□□□□ -2.31
PRDM9Q9NQV7 SNORA42.1-201ENST00000363515 137 ntBASIC0.62□□□□□ -2.31
PRDM9Q9NQV7 RNA5SP325-201ENST00000363756 130 ntBASIC0.62□□□□□ -2.31
PRDM9Q9NQV7 MIR5704-201ENST00000584029 77 ntBASIC0.62□□□□□ -2.31
PRDM9Q9NQV7 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
PRDM9Q9NQV7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
PRDM9Q9NQV7 RNU6-1233P-201ENST00000362922 102 ntBASIC0.61□□□□□ -2.31
PRDM9Q9NQV7 MIR1468-201ENST00000410600 86 ntBASIC0.61□□□□□ -2.31
PRDM9Q9NQV7 RNU6-530P-201ENST00000391180 107 ntBASIC0.6□□□□□ -2.31
PRDM9Q9NQV7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.59□□□□□ -2.31
PRDM9Q9NQV7 RNU6-901P-201ENST00000384593 106 ntBASIC0.59□□□□□ -2.31
PRDM9Q9NQV7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
PRDM9Q9NQV7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
PRDM9Q9NQV7 RNU6-724P-201ENST00000390958 105 ntBASIC0.58□□□□□ -2.32
PRDM9Q9NQV7 MIR8068-201ENST00000618032 68 ntBASIC0.58□□□□□ -2.32
PRDM9Q9NQV7 SNORD56B-201ENST00000384713 71 ntBASIC0.57□□□□□ -2.32
PRDM9Q9NQV7 SNORA27.2-201ENST00000363365 126 ntBASIC0.56□□□□□ -2.32
PRDM9Q9NQV7 MIR610-201ENST00000385139 96 ntBASIC0.56□□□□□ -2.32
PRDM9Q9NQV7 MIR548H4-201ENST00000408689 111 ntBASIC0.56□□□□□ -2.32
PRDM9Q9NQV7 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.56□□□□□ -2.32
PRDM9Q9NQV7 MIR4315-1-201ENST00000636800 73 ntBASIC0.56□□□□□ -2.32
PRDM9Q9NQV7 MIR4315-2-201ENST00000640925 73 ntBASIC0.56□□□□□ -2.32
PRDM9Q9NQV7 MIR193B-201ENST00000384907 83 ntBASIC0.55□□□□□ -2.32
PRDM9Q9NQV7 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
PRDM9Q9NQV7 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms